RNA–Protein interactions for RNA: ENST00000521491.1

CDH17-205, Transcript of cadherin 17, human

TSL 5

Gene CDH17, Length 637 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH17-205	ENST00000521491	UBE2D3	P61077	147 aa		3.83	□□□□□ -1.8
CDH17-205	ENST00000521491	UBE2D2	P62837	147 aa		3.83	□□□□□ -1.8
CDH17-205	ENST00000521491	PMVK	Q15126	192 aa		3.83	□□□□□ -1.8
CDH17-205	ENST00000521491	MEIG1	Q5JSS6	88 aa		3.83	□□□□□ -1.8
CDH17-205	ENST00000521491	FAM222A	Q5U5X8	452 aa		3.83	□□□□□ -1.8
CDH17-205	ENST00000521491	C14orf178	Q8N769	122 aa	Predicted RBP	3.83	□□□□□ -1.8
CDH17-205	ENST00000521491	ZNRF2	Q8NHG8	242 aa		3.83	□□□□□ -1.8
CDH17-205	ENST00000521491	NAA38	Q9BRA0	125 aa	Known RBP	3.83	□□□□□ -1.8
CDH17-205	ENST00000521491	TP73-AS1	Q9UF72	201 aa		3.83	□□□□□ -1.8
CDH17-205	ENST00000521491	TRAV26-2	A0A0B4J265	109 aa		3.82	□□□□□ -1.8
CDH17-205	ENST00000521491		A0A0J9YWU9	116 aa		3.82	□□□□□ -1.8
CDH17-205	ENST00000521491	MYMX	A0A1B0GTQ4	84 aa		3.82	□□□□□ -1.8
CDH17-205	ENST00000521491	SMKR1	H3BMG3	65 aa		3.82	□□□□□ -1.8
CDH17-205	ENST00000521491	RS1	O15537	224 aa		3.82	□□□□□ -1.8
CDH17-205	ENST00000521491	NCR2	O95944	276 aa		3.82	□□□□□ -1.8
CDH17-205	ENST00000521491	NPY	P01303	97 aa		3.82	□□□□□ -1.8
CDH17-205	ENST00000521491	IGKC	P01834	107 aa		3.82	□□□□□ -1.8
CDH17-205	ENST00000521491	DEFB130B	P0DP73	79 aa		3.82	□□□□□ -1.8
CDH17-205	ENST00000521491	DEFB130A	P0DP74	79 aa		3.82	□□□□□ -1.8
CDH17-205	ENST00000521491	PLN	P26678	52 aa		3.82	□□□□□ -1.8
CDH17-205	ENST00000521491	DAZ2	Q13117	558 aa	Known RBP	3.82	□□□□□ -1.8
CDH17-205	ENST00000521491	ZNF56	Q15929	161 aa		3.82	□□□□□ -1.8
CDH17-205	ENST00000521491	KRTAP15-1	Q3LI76	137 aa		3.82	□□□□□ -1.8
CDH17-205	ENST00000521491	MRPL51	Q4U2R6	128 aa	Known RBP	3.82	□□□□□ -1.8
CDH17-205	ENST00000521491	KRTAP5-3	Q6L8H2	238 aa		3.82	□□□□□ -1.8
CDH17-205	ENST00000521491	ORMDL3	Q8N138	153 aa		3.82	□□□□□ -1.8
CDH17-205	ENST00000521491	RNF185	Q96GF1	192 aa		3.82	□□□□□ -1.8
CDH17-205	ENST00000521491	HIST1H4G	Q99525	98 aa		3.82	□□□□□ -1.8
CDH17-205	ENST00000521491	DPH3P1	Q9H4G8	78 aa		3.82	□□□□□ -1.8
CDH17-205	ENST00000521491	NXT2	Q9NPJ8	142 aa	Known RBP	3.82	□□□□□ -1.8
CDH17-205	ENST00000521491	TRBV7-3	A0A075B6L6	115 aa		3.81	□□□□□ -1.8
CDH17-205	ENST00000521491	TRGV2	A0A075B6R0	118 aa		3.81	□□□□□ -1.8
CDH17-205	ENST00000521491	TRAV4	A0A0B4J268	109 aa		3.81	□□□□□ -1.8
CDH17-205	ENST00000521491	TRBV7-7	A0A0K0K1E9	115 aa		3.81	□□□□□ -1.8
CDH17-205	ENST00000521491		A4D1N5	150 aa		3.81	□□□□□ -1.8
CDH17-205	ENST00000521491	LINC01549	A6NIU2	74 aa		3.81	□□□□□ -1.8
CDH17-205	ENST00000521491	LYRM9	A8MSI8	78 aa		3.81	□□□□□ -1.8
CDH17-205	ENST00000521491		D6R8Y8	96 aa		3.81	□□□□□ -1.8
CDH17-205	ENST00000521491	CCDC179	H3BU77	68 aa		3.81	□□□□□ -1.8
CDH17-205	ENST00000521491	GAS8-AS1	O95177	125 aa		3.81	□□□□□ -1.8
CDH17-205	ENST00000521491	ACYP1	P07311	99 aa		3.81	□□□□□ -1.8
CDH17-205	ENST00000521491	CRYGD	P07320	174 aa		3.81	□□□□□ -1.8
CDH17-205	ENST00000521491	GATA1	P15976	413 aa	Predicted RBP	3.81	□□□□□ -1.8
CDH17-205	ENST00000521491	FCER1G	P30273	86 aa		3.81	□□□□□ -1.8
CDH17-205	ENST00000521491	RPL13A	P40429	203 aa	Known RBP	3.81	□□□□□ -1.8
CDH17-205	ENST00000521491	DAD1	P61803	113 aa		3.81	□□□□□ -1.8
CDH17-205	ENST00000521491	PLEC	Q15149	4684 aa	Known RBP	3.81	□□□□□ -1.8
CDH17-205	ENST00000521491	FAM104B	Q5XKR9	115 aa		3.81	□□□□□ -1.8
CDH17-205	ENST00000521491	PCP2	Q8IVA1	136 aa		3.81	□□□□□ -1.8
CDH17-205	ENST00000521491	LINC00612	Q8N6U2	182 aa		3.81	□□□□□ -1.8
CDH17-205	ENST00000521491	POM121L12	Q8N7R1	296 aa		3.81	□□□□□ -1.8
CDH17-205	ENST00000521491	RASL10A	Q92737	203 aa		3.81	□□□□□ -1.8
CDH17-205	ENST00000521491	C11orf68	Q9H3H3	251 aa	Known RBP	3.81	□□□□□ -1.8
CDH17-205	ENST00000521491	KIF25-AS1	Q9Y6Z4	181 aa		3.81	□□□□□ -1.8
CDH17-205	ENST00000521491		A0A096LNJ9	63 aa		3.8	□□□□□ -1.8
CDH17-205	ENST00000521491		F8WDY8	70 aa		3.8	□□□□□ -1.8
CDH17-205	ENST00000521491	UQCRQ	O14949	82 aa		3.8	□□□□□ -1.8
CDH17-205	ENST00000521491	SPART-AS1	P0CW21	52 aa		3.8	□□□□□ -1.8
CDH17-205	ENST00000521491		P0DMU3	169 aa		3.8	□□□□□ -1.8
CDH17-205	ENST00000521491	FAM231A	P0DMU4	169 aa		3.8	□□□□□ -1.8
CDH17-205	ENST00000521491	FAM231C	P0DMU5	169 aa		3.8	□□□□□ -1.8
CDH17-205	ENST00000521491	UBE2D1	P51668	147 aa		3.8	□□□□□ -1.8
CDH17-205	ENST00000521491	LINC00315	P59091	139 aa		3.8	□□□□□ -1.8
CDH17-205	ENST00000521491	PIK3CD-AS1	Q5SR53	167 aa		3.8	□□□□□ -1.8
CDH17-205	ENST00000521491	NFE4	Q86UQ8	179 aa		3.8	□□□□□ -1.8
CDH17-205	ENST00000521491	RPL39L	Q96EH5	51 aa	Known RBP	3.8	□□□□□ -1.8
CDH17-205	ENST00000521491	HHLA3	Q9XRX5	114 aa		3.8	□□□□□ -1.8
CDH17-205	ENST00000521491	HERC2	O95714	4834 aa		3.8	□□□□□ -1.8
CDH17-205	ENST00000521491	PCLO	Q9Y6V0	5065 aa		3.79	□□□□□ -1.8
CDH17-205	ENST00000521491	ALMS1	Q8TCU4	4167 aa		3.79	□□□□□ -1.8
CDH17-205	ENST00000521491	TRAV12-1	A0A0B4J245	112 aa		3.79	□□□□□ -1.8
CDH17-205	ENST00000521491	TRGV4	A0A0C4DH28	118 aa		3.79	□□□□□ -1.8
CDH17-205	ENST00000521491		K7EMI3	77 aa		3.79	□□□□□ -1.8
CDH17-205	ENST00000521491		K7ERJ3	54 aa		3.79	□□□□□ -1.8
CDH17-205	ENST00000521491	HTN3	P15516	51 aa		3.79	□□□□□ -1.8
CDH17-205	ENST00000521491	CKS2	P33552	79 aa		3.79	□□□□□ -1.8
CDH17-205	ENST00000521491	NANOS2	P60321	138 aa	Known RBP	3.79	□□□□□ -1.8
CDH17-205	ENST00000521491	ZFP2	Q6ZN57	461 aa		3.79	□□□□□ -1.8
CDH17-205	ENST00000521491	LINC00526	Q96FQ7	95 aa		3.79	□□□□□ -1.8
CDH17-205	ENST00000521491	TMEM101	Q96IK0	257 aa		3.79	□□□□□ -1.8
CDH17-205	ENST00000521491	CARD19	Q96LW7	228 aa		3.79	□□□□□ -1.8
CDH17-205	ENST00000521491	C18orf15	Q96N68	181 aa		3.79	□□□□□ -1.8
CDH17-205	ENST00000521491	PRADC1	Q9BSG0	188 aa		3.79	□□□□□ -1.8
CDH17-205	ENST00000521491	PPDPF	Q9H3Y8	114 aa		3.79	□□□□□ -1.8
CDH17-205	ENST00000521491		Q9UF83	564 aa		3.79	□□□□□ -1.8
CDH17-205	ENST00000521491	TRAV8-4	A0A0B4J246	113 aa		3.78	□□□□□ -1.8
CDH17-205	ENST00000521491	LOC100131303	A0A0U1RQF7	123 aa		3.78	□□□□□ -1.8
CDH17-205	ENST00000521491	LOC389332	A0A1B0GUA5	103 aa		3.78	□□□□□ -1.8
CDH17-205	ENST00000521491		C9JAW5	83 aa		3.78	□□□□□ -1.8
CDH17-205	ENST00000521491		K7EQD1	137 aa		3.78	□□□□□ -1.8
CDH17-205	ENST00000521491		M0QY20	66 aa		3.78	□□□□□ -1.8
CDH17-205	ENST00000521491	IFI27	P40305	119 aa	Predicted RBP	3.78	□□□□□ -1.8
CDH17-205	ENST00000521491	PSMB2	P49721	201 aa		3.78	□□□□□ -1.8
CDH17-205	ENST00000521491	PAPPA-AS1	Q5QFB9	102 aa		3.78	□□□□□ -1.8
CDH17-205	ENST00000521491	TMEM170B	Q5T4T1	132 aa		3.78	□□□□□ -1.8
CDH17-205	ENST00000521491		Q6ZTC4	211 aa		3.78	□□□□□ -1.8
CDH17-205	ENST00000521491	C3orf22	Q8N5N4	141 aa		3.78	□□□□□ -1.8
CDH17-205	ENST00000521491	ANKRD29	Q8N6D5	301 aa		3.78	□□□□□ -1.8
CDH17-205	ENST00000521491	SLC25A29	Q8N8R3	303 aa		3.78	□□□□□ -1.8
CDH17-205	ENST00000521491	NRAC	Q8N912	160 aa		3.78	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 56 ms