RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 KDM3BQ7LBC6 1761 aa0.76□□□□□ -2.29
PTPN12-214ENST00000520947 ARHGEF12Q9NZN5 1544 aa0.76□□□□□ -2.29
PTPN12-214ENST00000520947 TRBV25-1A0A075B6N4 114 aa0.76□□□□□ -2.29
PTPN12-214ENST00000520947 A0A0G2JND7 137 aa0.76□□□□□ -2.29
PTPN12-214ENST00000520947 TRBV7-7A0A0K0K1E9 115 aa0.76□□□□□ -2.29
PTPN12-214ENST00000520947 H7BZZ5 65 aa0.76□□□□□ -2.29
PTPN12-214ENST00000520947 M0R3E3 92 aa0.76□□□□□ -2.29
PTPN12-214ENST00000520947 UQCRHP07919 91 aa0.76□□□□□ -2.29
PTPN12-214ENST00000520947 PMCHL1Q16048 86 aa0.76□□□□□ -2.29
PTPN12-214ENST00000520947 PRO1933Q9H354 126 aa0.76□□□□□ -2.29
PTPN12-214ENST00000520947 SPCS1Q9Y6A9 102 aa0.76□□□□□ -2.29
PTPN12-214ENST00000520947 COL4A6Q14031 1691 aa0.75□□□□□ -2.29
PTPN12-214ENST00000520947 POLQO75417 2590 aa0.75□□□□□ -2.29
PTPN12-214ENST00000520947 AKAP12Q02952 1782 aa0.75□□□□□ -2.29
PTPN12-214ENST00000520947 EPRSP07814 1512 aaKnown RBP0.74□□□□□ -2.29
PTPN12-214ENST00000520947 RAPGEF2Q9Y4G8 1499 aa0.74□□□□□ -2.29
PTPN12-214ENST00000520947 C10orf142B7Z368 130 aa0.74□□□□□ -2.29
PTPN12-214ENST00000520947 SYS1-DBNDD2H3BUS1 97 aa0.74□□□□□ -2.29
PTPN12-214ENST00000520947 PSMG4Q5JS54 123 aa0.74□□□□□ -2.29
PTPN12-214ENST00000520947 LINC00846Q9NV44 126 aa0.74□□□□□ -2.29
PTPN12-214ENST00000520947 MARF1Q9Y4F3 1742 aaKnown RBP0.74□□□□□ -2.29
PTPN12-214ENST00000520947 ABCC2Q92887 1545 aa0.74□□□□□ -2.29
PTPN12-214ENST00000520947 PLEKHH2Q8IVE3 1493 aa0.73□□□□□ -2.29
PTPN12-214ENST00000520947 UQCRHLA0A096LP55 91 aa0.73□□□□□ -2.29
PTPN12-214ENST00000520947 TRBV6-1A0A0K0K1D8 114 aa0.73□□□□□ -2.29
PTPN12-214ENST00000520947 C10orf113Q5VZT2 155 aa0.73□□□□□ -2.29
PTPN12-214ENST00000520947 PRO0255Q9UI72 69 aa0.73□□□□□ -2.29
PTPN12-214ENST00000520947 BAZ1AQ9NRL2 1556 aaPredicted RBP0.73□□□□□ -2.29
PTPN12-214ENST00000520947 ASXL3Q9C0F0 2248 aa0.73□□□□□ -2.29
PTPN12-214ENST00000520947 FANCAO15360 1455 aa0.73□□□□□ -2.29
PTPN12-214ENST00000520947 BCE1O60756 84 aa0.72□□□□□ -2.29
PTPN12-214ENST00000520947 GYPAP02724 150 aa0.72□□□□□ -2.29
PTPN12-214ENST00000520947 PRH1P02810 166 aa0.72□□□□□ -2.29
PTPN12-214ENST00000520947 SPINK6Q6UWN8 80 aa0.72□□□□□ -2.29
PTPN12-214ENST00000520947 Q9H521 79 aa0.72□□□□□ -2.29
PTPN12-214ENST00000520947 V9GYS6 101 aa0.72□□□□□ -2.29
PTPN12-214ENST00000520947 C1orf167Q5SNV9 1468 aa0.72□□□□□ -2.29
PTPN12-214ENST00000520947 LAMC1P11047 1609 aa0.71□□□□□ -2.3
PTPN12-214ENST00000520947 APCP25054 2843 aa0.71□□□□□ -2.3
PTPN12-214ENST00000520947 FAUP35544 74 aaKnown RBP0.71□□□□□ -2.3
PTPN12-214ENST00000520947 TP53AIP1Q9HCN2 124 aa0.71□□□□□ -2.3
PTPN12-214ENST00000520947 ZFHX3Q15911 3703 aa0.71□□□□□ -2.3
PTPN12-214ENST00000520947 WNK3Q9BYP7 1800 aa0.71□□□□□ -2.3
PTPN12-214ENST00000520947 ABCA12Q86UK0 2595 aa0.7□□□□□ -2.3
PTPN12-214ENST00000520947 NUP188Q5SRE5 1749 aa0.7□□□□□ -2.3
PTPN12-214ENST00000520947 IQSEC2Q5JU85 1478 aa0.7□□□□□ -2.3
PTPN12-214ENST00000520947 C7orf77A4D0Y5 90 aa0.7□□□□□ -2.3
PTPN12-214ENST00000520947 LINC01600Q96MT4 127 aa0.7□□□□□ -2.3
PTPN12-214ENST00000520947 SMR3AQ99954 134 aa0.7□□□□□ -2.3
PTPN12-214ENST00000520947 FDCSPQ8NFU4 85 aa0.69□□□□□ -2.3
PTPN12-214ENST00000520947 CEP162Q5TB80 1403 aa0.69□□□□□ -2.3
PTPN12-214ENST00000520947 ATP10BO94823 1461 aa0.68□□□□□ -2.3
PTPN12-214ENST00000520947 POLA1P09884 1462 aaPredicted RBP0.68□□□□□ -2.3
PTPN12-214ENST00000520947 NRXN1Q9ULB1 1477 aa0.68□□□□□ -2.3
PTPN12-214ENST00000520947 BIVM-ERCC5R4GMW8 1640 aa0.68□□□□□ -2.3
PTPN12-214ENST00000520947 A0A087WVE0 104 aa0.68□□□□□ -2.3
PTPN12-214ENST00000520947 H3BQF6 201 aa0.68□□□□□ -2.3
PTPN12-214ENST00000520947 GNG2P59768 71 aa0.68□□□□□ -2.3
PTPN12-214ENST00000520947 Q8IZM0 81 aa0.68□□□□□ -2.3
PTPN12-214ENST00000520947 TULP4Q9NRJ4 1543 aa0.68□□□□□ -2.3
PTPN12-214ENST00000520947 RB1CC1Q8TDY2 1594 aa0.67□□□□□ -2.3
PTPN12-214ENST00000520947 I3L2K1 104 aa0.67□□□□□ -2.3
PTPN12-214ENST00000520947 KRTAP2-3P0C7H8 128 aa0.67□□□□□ -2.3
PTPN12-214ENST00000520947 HMGN3Q15651 99 aa0.67□□□□□ -2.3
PTPN12-214ENST00000520947 PIGYQ3MUY2 71 aa0.67□□□□□ -2.3
PTPN12-214ENST00000520947 ZNF720Q7Z2F6 126 aa0.67□□□□□ -2.3
PTPN12-214ENST00000520947 KRTAP2-4Q9BYR9 128 aa0.67□□□□□ -2.3
PTPN12-214ENST00000520947 KRTAP2-1Q9BYU5 128 aa0.67□□□□□ -2.3
PTPN12-214ENST00000520947 CLTCQ00610 1675 aaKnown RBP0.67□□□□□ -2.3
PTPN12-214ENST00000520947 ABCC3O15438 1527 aa0.67□□□□□ -2.3
PTPN12-214ENST00000520947 NLRP1Q9C000 1473 aa0.67□□□□□ -2.3
PTPN12-214ENST00000520947 BTAF1O14981 1849 aa0.66□□□□□ -2.3
PTPN12-214ENST00000520947 TRBV7-4A0A0J9YYF1 115 aa0.66□□□□□ -2.3
PTPN12-214ENST00000520947 ETDBQ3ZM63 59 aa0.66□□□□□ -2.3
PTPN12-214ENST00000520947 XRN1Q8IZH2 1706 aaKnown RBP0.66□□□□□ -2.3
PTPN12-214ENST00000520947 PAPPAQ13219 1627 aa0.65□□□□□ -2.31
PTPN12-214ENST00000520947 PLXNB2O15031 1838 aa0.64□□□□□ -2.31
PTPN12-214ENST00000520947 PVALEFA0A1B0GWK0 134 aa0.64□□□□□ -2.31
PTPN12-214ENST00000520947 H0Y9P7 68 aa0.64□□□□□ -2.31
PTPN12-214ENST00000520947 ARMS2P0C7Q2 107 aa0.64□□□□□ -2.31
PTPN12-214ENST00000520947 LCN9Q8WX39 176 aa0.64□□□□□ -2.31
PTPN12-214ENST00000520947 TPRP12270 2363 aaKnown RBP0.64□□□□□ -2.31
PTPN12-214ENST00000520947 A0A0G2JMZ2 1700 aa0.64□□□□□ -2.31
PTPN12-214ENST00000520947 FRAS1Q86XX4 4008 aa0.63□□□□□ -2.31
PTPN12-214ENST00000520947 Q5BKY6 102 aa0.63□□□□□ -2.31
PTPN12-214ENST00000520947 DEFB123Q8N688 67 aa0.63□□□□□ -2.31
PTPN12-214ENST00000520947 C20orf78Q9BR46 151 aa0.63□□□□□ -2.31
PTPN12-214ENST00000520947 EDC4Q6P2E9 1401 aaKnown RBP0.63□□□□□ -2.31
PTPN12-214ENST00000520947 PDCD11Q14690 1871 aaKnown RBP0.63□□□□□ -2.31
PTPN12-214ENST00000520947 CACNA1EQ15878 2313 aa0.63□□□□□ -2.31
PTPN12-214ENST00000520947 GPR98Q8WXG9 6306 aa0.62□□□□□ -2.31
PTPN12-214ENST00000520947 SETBP1Q9Y6X0 1596 aa0.62□□□□□ -2.31
PTPN12-214ENST00000520947 SPTBN2O15020 2390 aa0.62□□□□□ -2.31
PTPN12-214ENST00000520947 AHCTF1Q8WYP5 2266 aa0.62□□□□□ -2.31
PTPN12-214ENST00000520947 ANKRD17O75179 2603 aaKnown RBP0.62□□□□□ -2.31
PTPN12-214ENST00000520947 MON2Q7Z3U7 1717 aa0.62□□□□□ -2.31
PTPN12-214ENST00000520947 LINC00959A0A1B0GUT2 108 aa0.62□□□□□ -2.31
PTPN12-214ENST00000520947 SMIM11AP58511 58 aa0.62□□□□□ -2.31
PTPN12-214ENST00000520947 PYY3Q5JQD4 70 aa0.62□□□□□ -2.31
PTPN12-214ENST00000520947 ALKAL2Q6UX46 152 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms