RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 KRTAP1-4P0C5Y4 121 aa6.89□□□□□ -1.31
MRPS28-206ENST00000520946 TLX1NBP0CAT3 122 aa6.89□□□□□ -1.31
MRPS28-206ENST00000520946 HBBP68871 147 aa6.89□□□□□ -1.31
MRPS28-206ENST00000520946 SMDT1Q9H4I9 107 aa6.89□□□□□ -1.31
MRPS28-206ENST00000520946 LPAP08519 4548 aa6.88□□□□□ -1.31
MRPS28-206ENST00000520946 C10orf25Q5T742 122 aa6.88□□□□□ -1.31
MRPS28-206ENST00000520946 KRTAP11-1Q8IUC1 163 aa6.88□□□□□ -1.31
MRPS28-206ENST00000520946 C6orf48Q9UBA6 75 aa6.88□□□□□ -1.31
MRPS28-206ENST00000520946 ZNF861PO60384 105 aa6.87□□□□□ -1.31
MRPS28-206ENST00000520946 SLC51BQ86UW2 128 aa6.87□□□□□ -1.31
MRPS28-206ENST00000520946 SPANXA1Q9NS26 97 aa6.87□□□□□ -1.31
MRPS28-206ENST00000520946 IGHV3OR16-9A0A0B4J2B5 98 aa6.86□□□□□ -1.31
MRPS28-206ENST00000520946 TRBV30A0A0K0K1B3 111 aa6.86□□□□□ -1.31
MRPS28-206ENST00000520946 PRSS2P07478 247 aa6.86□□□□□ -1.31
MRPS28-206ENST00000520946 CKS2P33552 79 aa6.86□□□□□ -1.31
MRPS28-206ENST00000520946 RPL39P62891 51 aaKnown RBP6.86□□□□□ -1.31
MRPS28-206ENST00000520946 NRACQ8N912 160 aa6.86□□□□□ -1.31
MRPS28-206ENST00000520946 SMIM7Q9BQ49 75 aa6.86□□□□□ -1.31
MRPS28-206ENST00000520946 C20orf78Q9BR46 151 aa6.86□□□□□ -1.31
MRPS28-206ENST00000520946 EIF5A2Q9GZV4 153 aaKnown RBP6.86□□□□□ -1.31
MRPS28-206ENST00000520946 LINC00862A6NCI5 91 aa6.85□□□□□ -1.31
MRPS28-206ENST00000520946 NDUFC2-KCTD14E9PQ53 114 aa6.85□□□□□ -1.31
MRPS28-206ENST00000520946 NUPR1O60356 82 aa6.85□□□□□ -1.31
MRPS28-206ENST00000520946 BLOC1S1P78537 153 aa6.85□□□□□ -1.31
MRPS28-206ENST00000520946 LBHQ53QV2 105 aaPredicted RBP6.85□□□□□ -1.31
MRPS28-206ENST00000520946 TYMSOSQ8TAI1 123 aa6.85□□□□□ -1.31
MRPS28-206ENST00000520946 OSTCQ9NRP0 149 aa6.85□□□□□ -1.31
MRPS28-206ENST00000520946 ZNF727A8MUV8 499 aa6.84□□□□□ -1.31
MRPS28-206ENST00000520946 CRYGAP11844 174 aa6.84□□□□□ -1.31
MRPS28-206ENST00000520946 RAB5AP20339 215 aa6.84□□□□□ -1.31
MRPS28-206ENST00000520946 IFI27P40305 119 aaPredicted RBP6.84□□□□□ -1.31
MRPS28-206ENST00000520946 CKS1BP61024 79 aa6.84□□□□□ -1.31
MRPS28-206ENST00000520946 MRPL51Q4U2R6 128 aaKnown RBP6.84□□□□□ -1.31
MRPS28-206ENST00000520946 NAT8BQ9UHF3 227 aa6.84□□□□□ -1.31
MRPS28-206ENST00000520946 KRTAP9-6A0A140TA67 174 aa6.83□□□□□ -1.32
MRPS28-206ENST00000520946 RPL28P46779 137 aaKnown RBP6.83□□□□□ -1.32
MRPS28-206ENST00000520946 MRPS36P82909 103 aaKnown RBP6.83□□□□□ -1.32
MRPS28-206ENST00000520946 FAM104BQ5XKR9 115 aa6.83□□□□□ -1.32
MRPS28-206ENST00000520946 C2orf82Q6UX34 121 aa6.83□□□□□ -1.32
MRPS28-206ENST00000520946 LINC01551Q86U37 167 aa6.83□□□□□ -1.32
MRPS28-206ENST00000520946 CTDSP1Q9GZU7 261 aa6.83□□□□□ -1.32
MRPS28-206ENST00000520946 CDIP1Q9H305 208 aa6.83□□□□□ -1.32
MRPS28-206ENST00000520946 TOMM7Q9P0U1 55 aa6.83□□□□□ -1.32
MRPS28-206ENST00000520946 TNFRSF6BO95407 300 aa6.82□□□□□ -1.32
MRPS28-206ENST00000520946 F8W036 122 aa6.81□□□□□ -1.32
MRPS28-206ENST00000520946 C6orf226Q5I0X4 101 aa6.81□□□□□ -1.32
MRPS28-206ENST00000520946 C9orf129Q5T035 196 aaKnown RBP6.81□□□□□ -1.32
MRPS28-206ENST00000520946 LINC00469Q8N7U9 141 aa6.81□□□□□ -1.32
MRPS28-206ENST00000520946 C2orf88Q9BSF0 95 aa6.81□□□□□ -1.32
MRPS28-206ENST00000520946 SMIM2Q9BVW6 85 aa6.81□□□□□ -1.32
MRPS28-206ENST00000520946 C22orf24Q9Y442 160 aa6.81□□□□□ -1.32
MRPS28-206ENST00000520946 TRBV24-1A0A075B6N3 115 aa6.8□□□□□ -1.32
MRPS28-206ENST00000520946 A0A1B0GW15 77 aa6.8□□□□□ -1.32
MRPS28-206ENST00000520946 S100A8P05109 93 aa6.8□□□□□ -1.32
MRPS28-206ENST00000520946 RPL32P62910 135 aaKnown RBP6.8□□□□□ -1.32
MRPS28-206ENST00000520946 TEX43Q6ZNM6 134 aa6.8□□□□□ -1.32
MRPS28-206ENST00000520946 KRTAP7-1Q8IUC3 87 aa6.8□□□□□ -1.32
MRPS28-206ENST00000520946 D6R8Y8 96 aa6.79□□□□□ -1.32
MRPS28-206ENST00000520946 KIAA0087Q14695 138 aa6.79□□□□□ -1.32
MRPS28-206ENST00000520946 LINC00242Q5T6M2 205 aa6.79□□□□□ -1.32
MRPS28-206ENST00000520946 ALKAL2Q6UX46 152 aa6.79□□□□□ -1.32
MRPS28-206ENST00000520946 Q6ZN92 141 aa6.79□□□□□ -1.32
MRPS28-206ENST00000520946 TMEM141Q96I45 108 aa6.79□□□□□ -1.32
MRPS28-206ENST00000520946 XAGE1AQ9HD64 81 aa6.79□□□□□ -1.32
MRPS28-206ENST00000520946 V9GYV3 84 aa6.79□□□□□ -1.32
MRPS28-206ENST00000520946 ADIRFQ15847 76 aa6.78□□□□□ -1.32
MRPS28-206ENST00000520946 FAM74A3Q4VXF1 159 aa6.78□□□□□ -1.32
MRPS28-206ENST00000520946 MRPL55Q7Z7F7 128 aaKnown RBP6.78□□□□□ -1.32
MRPS28-206ENST00000520946 RETNLBQ9BQ08 111 aa6.78□□□□□ -1.32
MRPS28-206ENST00000520946 MUC2Q02817 5179 aa6.77□□□□□ -1.33
MRPS28-206ENST00000520946 A0A087X002 238 aa6.77□□□□□ -1.33
MRPS28-206ENST00000520946 BCE1O60756 84 aa6.77□□□□□ -1.33
MRPS28-206ENST00000520946 PPBPP02775 128 aa6.77□□□□□ -1.33
MRPS28-206ENST00000520946 UBE2AP49459 152 aa6.77□□□□□ -1.33
MRPS28-206ENST00000520946 LCE2AQ5TA79 106 aaPredicted RBP6.77□□□□□ -1.33
MRPS28-206ENST00000520946 ALKBH7Q9BT30 221 aaPredicted RBP6.77□□□□□ -1.33
MRPS28-206ENST00000520946 NPYP01303 97 aa6.76□□□□□ -1.33
MRPS28-206ENST00000520946 MRPL54Q6P161 138 aaKnown RBP6.76□□□□□ -1.33
MRPS28-206ENST00000520946 TCTE3Q8IZS6 198 aa6.76□□□□□ -1.33
MRPS28-206ENST00000520946 LINC01561Q8N1V8 128 aa6.76□□□□□ -1.33
MRPS28-206ENST00000520946 FAM104AQ969W3 186 aa6.76□□□□□ -1.33
MRPS28-206ENST00000520946 VCX2Q9H322 139 aa6.76□□□□□ -1.33
MRPS28-206ENST00000520946 PYGO1Q9Y3Y4 419 aa6.76□□□□□ -1.33
MRPS28-206ENST00000520946 IGLV7-46A0A075B6I9 117 aa6.75□□□□□ -1.33
MRPS28-206ENST00000520946 IGLV4-3A0A075B6K6 122 aa6.75□□□□□ -1.33
MRPS28-206ENST00000520946 IGKV2D-26A0A0A0MRZ7 120 aa6.75□□□□□ -1.33
MRPS28-206ENST00000520946 RPL37AP8A6NKH3 93 aa6.75□□□□□ -1.33
MRPS28-206ENST00000520946 LINC00173Q6ZV60 143 aa6.75□□□□□ -1.33
MRPS28-206ENST00000520946 ORMDL3Q8N138 153 aa6.75□□□□□ -1.33
MRPS28-206ENST00000520946 LINC00304Q8N9R0 145 aa6.75□□□□□ -1.33
MRPS28-206ENST00000520946 ANAPC11Q9NYG5 84 aa6.75□□□□□ -1.33
MRPS28-206ENST00000520946 SMIM27A0A1W2PRY6 76 aa6.74□□□□□ -1.33
MRPS28-206ENST00000520946 SRP19P09132 144 aaKnown RBP6.74□□□□□ -1.33
MRPS28-206ENST00000520946 TMEM136Q6ZRR5 245 aa6.74□□□□□ -1.33
MRPS28-206ENST00000520946 PRELID3AQ96N28 172 aa6.74□□□□□ -1.33
MRPS28-206ENST00000520946 TP73-AS1Q9UF72 201 aa6.74□□□□□ -1.33
MRPS28-206ENST00000520946 LOC389332A0A1B0GUA5 103 aa6.73□□□□□ -1.33
MRPS28-206ENST00000520946 GAGE10A6NGK3 116 aa6.73□□□□□ -1.33
MRPS28-206ENST00000520946 RPL23P62829 140 aaKnown RBP6.73□□□□□ -1.33
MRPS28-206ENST00000520946 Q8IZM0 81 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms