RNA–Protein interactions for RNA: ENST00000520846.1

MSR1-211, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 4

Gene MSR1, Length 373 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-211ENST00000520846 DEFB123Q8N688 67 aa-0.64□□□□□ -2.51
MSR1-211ENST00000520846 KIAA1109Q2LD37 5005 aa-0.64□□□□□ -2.51
MSR1-211ENST00000520846 TCHHQ07283 1943 aa-0.64□□□□□ -2.51
MSR1-211ENST00000520846 LOC730098B7Z3J9 87 aa-0.65□□□□□ -2.51
MSR1-211ENST00000520846 MRPL54Q6P161 138 aaKnown RBP-0.65□□□□□ -2.51
MSR1-211ENST00000520846 C5orf38Q86SI9 138 aa-0.65□□□□□ -2.51
MSR1-211ENST00000520846 MYOZ3Q8TDC0 251 aa-0.65□□□□□ -2.51
MSR1-211ENST00000520846 TSC22D3Q99576 134 aa-0.65□□□□□ -2.51
MSR1-211ENST00000520846 DOPEY1Q5JWR5 2465 aa-0.65□□□□□ -2.51
MSR1-211ENST00000520846 MYOM1P52179 1685 aa-0.65□□□□□ -2.51
MSR1-211ENST00000520846 POLA1P09884 1462 aaPredicted RBP-0.66□□□□□ -2.51
MSR1-211ENST00000520846 DNAJC13O75165 2243 aa-0.66□□□□□ -2.51
MSR1-211ENST00000520846 MGPP08493 103 aa-0.66□□□□□ -2.52
MSR1-211ENST00000520846 S100A12P80511 92 aa-0.66□□□□□ -2.52
MSR1-211ENST00000520846 ARHGEF12Q9NZN5 1544 aa-0.66□□□□□ -2.52
MSR1-211ENST00000520846 COL6A3P12111 3177 aa-0.66□□□□□ -2.52
MSR1-211ENST00000520846 NF1P21359 2839 aa-0.66□□□□□ -2.52
MSR1-211ENST00000520846 GAPVD1Q14C86 1478 aa-0.67□□□□□ -2.52
MSR1-211ENST00000520846 LAMA5O15230 3695 aa-0.67□□□□□ -2.52
MSR1-211ENST00000520846 KDM5AP29375 1690 aaKnown RBP-0.67□□□□□ -2.52
MSR1-211ENST00000520846 FAIMQ9NVQ4 179 aa-0.67□□□□□ -2.52
MSR1-211ENST00000520846 FLNBO75369 2602 aaKnown RBP-0.67□□□□□ -2.52
MSR1-211ENST00000520846 BTAF1O14981 1849 aa-0.67□□□□□ -2.52
MSR1-211ENST00000520846 PDZD2O15018 2839 aa-0.67□□□□□ -2.52
MSR1-211ENST00000520846 CREBBPQ92793 2442 aa-0.67□□□□□ -2.52
MSR1-211ENST00000520846 STARD9Q9P2P6 4700 aa-0.68□□□□□ -2.52
MSR1-211ENST00000520846 K7EP13 123 aa-0.68□□□□□ -2.52
MSR1-211ENST00000520846 SPINK4O60575 86 aa-0.68□□□□□ -2.52
MSR1-211ENST00000520846 TMEM263Q8WUH6 116 aaKnown RBP-0.68□□□□□ -2.52
MSR1-211ENST00000520846 C1orf54Q8WWF1 131 aa-0.68□□□□□ -2.52
MSR1-211ENST00000520846 NSD3Q9BZ95 1437 aa-0.68□□□□□ -2.52
MSR1-211ENST00000520846 FAM107BQ9H098 131 aa-0.68□□□□□ -2.52
MSR1-211ENST00000520846 UQCR10Q9UDW1 63 aa-0.68□□□□□ -2.52
MSR1-211ENST00000520846 KTN1Q86UP2 1357 aaKnown RBP-0.69□□□□□ -2.52
MSR1-211ENST00000520846 LRP1BQ9NZR2 4599 aa-0.69□□□□□ -2.52
MSR1-211ENST00000520846 LOC100130705A0A1B0GUX0 176 aa-0.69□□□□□ -2.52
MSR1-211ENST00000520846 CHKB-CPT1BH3BT56 60 aa-0.69□□□□□ -2.52
MSR1-211ENST00000520846 FXYD6Q9H0Q3 95 aa-0.69□□□□□ -2.52
MSR1-211ENST00000520846 NXT2Q9NPJ8 142 aaKnown RBP-0.69□□□□□ -2.52
MSR1-211ENST00000520846 SHROOM2Q13796 1616 aa-0.69□□□□□ -2.52
MSR1-211ENST00000520846 RNF213Q63HN8 5207 aa-0.69□□□□□ -2.52
MSR1-211ENST00000520846 SMG6Q86US8 1419 aaKnown RBP-0.7□□□□□ -2.52
MSR1-211ENST00000520846 TRBV7-4A0A0J9YYF1 115 aa-0.7□□□□□ -2.52
MSR1-211ENST00000520846 AKAIN1P0CW23 69 aa-0.7□□□□□ -2.52
MSR1-211ENST00000520846 WHAMMP3Q1A5X7 153 aa-0.7□□□□□ -2.52
MSR1-211ENST00000520846 LINC00474Q9P2X8 69 aa-0.7□□□□□ -2.52
MSR1-211ENST00000520846 CNOT1A5YKK6 2376 aaKnown RBP-0.7□□□□□ -2.52
MSR1-211ENST00000520846 QRICH2Q9H0J4 1663 aa-0.71□□□□□ -2.52
MSR1-211ENST00000520846 ROBO1Q9Y6N7 1651 aa-0.71□□□□□ -2.52
MSR1-211ENST00000520846 IGLC1P0CG04 106 aa-0.71□□□□□ -2.52
MSR1-211ENST00000520846 C10orf113Q5VZT2 155 aa-0.71□□□□□ -2.52
MSR1-211ENST00000520846 SPRR4Q96PI1 79 aa-0.71□□□□□ -2.52
MSR1-211ENST00000520846 SETXQ7Z333 2677 aaKnown RBP-0.71□□□□□ -2.52
MSR1-211ENST00000520846 TULP4Q9NRJ4 1543 aa-0.71□□□□□ -2.52
MSR1-211ENST00000520846 ARHGEF5Q12774 1597 aa-0.71□□□□□ -2.52
MSR1-211ENST00000520846 A2ML1A8K2U0 1454 aa-0.72□□□□□ -2.52
MSR1-211ENST00000520846 OOSP1A8MZH6 123 aa-0.72□□□□□ -2.52
MSR1-211ENST00000520846 HMGN1P05114 100 aa-0.72□□□□□ -2.52
MSR1-211ENST00000520846 UBA52P62987 128 aaKnown RBP-0.72□□□□□ -2.52
MSR1-211ENST00000520846 CDC42SE2Q9NRR3 84 aa-0.72□□□□□ -2.52
MSR1-211ENST00000520846 MAGI1Q96QZ7 1491 aaPredicted RBP-0.73□□□□□ -2.53
MSR1-211ENST00000520846 UBE2L5PA0A1B0GUS4 154 aa-0.73□□□□□ -2.53
MSR1-211ENST00000520846 UBE2L3P68036 154 aaKnown RBP-0.73□□□□□ -2.53
MSR1-211ENST00000520846 C9orf153Q5TBE3 101 aa-0.73□□□□□ -2.53
MSR1-211ENST00000520846 FAM223AQ8IWN6 122 aa-0.73□□□□□ -2.53
MSR1-211ENST00000520846 PP6455Q8WZ26 134 aa-0.73□□□□□ -2.53
MSR1-211ENST00000520846 ARL2-SNX15V9GYD0 113 aa-0.73□□□□□ -2.53
MSR1-211ENST00000520846 ATP5EP56381 51 aaPredicted RBP-0.74□□□□□ -2.53
MSR1-211ENST00000520846 BIRC6Q9NR09 4857 aa-0.74□□□□□ -2.53
MSR1-211ENST00000520846 RYR2Q92736 4967 aa-0.74□□□□□ -2.53
MSR1-211ENST00000520846 LINC00959A0A1B0GUT2 108 aa-0.75□□□□□ -2.53
MSR1-211ENST00000520846 M0R2T5 61 aa-0.75□□□□□ -2.53
MSR1-211ENST00000520846 FDCSPQ8NFU4 85 aa-0.75□□□□□ -2.53
MSR1-211ENST00000520846 DEFB105AQ8NG35 78 aa-0.75□□□□□ -2.53
MSR1-211ENST00000520846 FAM167A-AS1Q96KT0 104 aa-0.75□□□□□ -2.53
MSR1-211ENST00000520846 SETBP1Q9Y6X0 1596 aa-0.75□□□□□ -2.53
MSR1-211ENST00000520846 HIVEP1P15822 2718 aa-0.75□□□□□ -2.53
MSR1-211ENST00000520846 TET3O43151 1660 aa-0.75□□□□□ -2.53
MSR1-211ENST00000520846 SYS1-DBNDD2H3BUS1 97 aa-0.76□□□□□ -2.53
MSR1-211ENST00000520846 GNG11P61952 73 aa-0.76□□□□□ -2.53
MSR1-211ENST00000520846 LINC01600Q96MT4 127 aa-0.76□□□□□ -2.53
MSR1-211ENST00000520846 PRO1933Q9H354 126 aa-0.76□□□□□ -2.53
MSR1-211ENST00000520846 HMGXB3Q12766 1538 aa-0.76□□□□□ -2.53
MSR1-211ENST00000520846 EHBP1L1Q8N3D4 1523 aa-0.76□□□□□ -2.53
MSR1-211ENST00000520846 KIAA0556O60303 1618 aa-0.76□□□□□ -2.53
MSR1-211ENST00000520846 SETD2Q9BYW2 2564 aaPredicted RBP-0.76□□□□□ -2.53
MSR1-211ENST00000520846 PRKDCP78527 4128 aaKnown RBP-0.76□□□□□ -2.53
MSR1-211ENST00000520846 STAB2Q8WWQ8 2551 aa-0.77□□□□□ -2.53
MSR1-211ENST00000520846 CUL7Q14999 1698 aa-0.77□□□□□ -2.53
MSR1-211ENST00000520846 ROCK2O75116 1388 aaKnown RBP-0.77□□□□□ -2.53
MSR1-211ENST00000520846 FAM24AA6NFZ4 105 aa-0.77□□□□□ -2.53
MSR1-211ENST00000520846 COX8AP10176 69 aa-0.77□□□□□ -2.53
MSR1-211ENST00000520846 IQSEC2Q5JU85 1478 aa-0.78□□□□□ -2.53
MSR1-211ENST00000520846 LAMA2P24043 3122 aaKnown RBP-0.78□□□□□ -2.53
MSR1-211ENST00000520846 F6UZH7 168 aa-0.78□□□□□ -2.53
MSR1-211ENST00000520846 KLK9Q2XQG4 91 aa-0.78□□□□□ -2.53
MSR1-211ENST00000520846 USMG5Q96IX5 58 aa-0.78□□□□□ -2.53
MSR1-211ENST00000520846 DPH3P1Q9H4G8 78 aa-0.78□□□□□ -2.53
MSR1-211ENST00000520846 NBEAL1Q6ZS30 2694 aa-0.78□□□□□ -2.53
MSR1-211ENST00000520846 SNAPC5O75971 98 aa-0.79□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms