RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 OPRPNQ99935 248 aaPredicted RBP7.41□□□□□ -1.22
SPIDR-212ENST00000519661 SMCO4Q9NRQ5 59 aa7.41□□□□□ -1.22
SPIDR-212ENST00000519661 A0A087WZ39 114 aa7.4□□□□□ -1.22
SPIDR-212ENST00000519661 TRAV13-1A0A0B4J241 112 aa7.4□□□□□ -1.22
SPIDR-212ENST00000519661 OR10D4PQ8NGN7 298 aa7.4□□□□□ -1.22
SPIDR-212ENST00000519661 URB1-AS1Q96HZ7 61 aa7.4□□□□□ -1.22
SPIDR-212ENST00000519661 C2orf48Q96LS8 159 aa7.4□□□□□ -1.22
SPIDR-212ENST00000519661 AP5S1Q9NUS5 200 aa7.4□□□□□ -1.22
SPIDR-212ENST00000519661 TRAPPC1Q9Y5R8 145 aa7.4□□□□□ -1.22
SPIDR-212ENST00000519661 VPS13BQ7Z7G8 4022 aa7.4□□□□□ -1.22
SPIDR-212ENST00000519661 A0A096LNJ9 63 aa7.39□□□□□ -1.23
SPIDR-212ENST00000519661 IFITM10A6NMD0 228 aa7.39□□□□□ -1.23
SPIDR-212ENST00000519661 RNASE13Q5GAN3 156 aaKnown RBP7.39□□□□□ -1.23
SPIDR-212ENST00000519661 TEX43Q6ZNM6 134 aa7.39□□□□□ -1.23
SPIDR-212ENST00000519661 PRSS3P2Q8NHM4 247 aa7.39□□□□□ -1.23
SPIDR-212ENST00000519661 KRTAP4-5Q9BYR2 181 aa7.39□□□□□ -1.23
SPIDR-212ENST00000519661 IGHV3-64A0A075B6Q5 118 aa7.38□□□□□ -1.23
SPIDR-212ENST00000519661 EPM2AB3EWF7 344 aa7.38□□□□□ -1.23
SPIDR-212ENST00000519661 LINC01620Q4KN68 170 aa7.38□□□□□ -1.23
SPIDR-212ENST00000519661 Q6ZN92 141 aa7.38□□□□□ -1.23
SPIDR-212ENST00000519661 SCXQ7RTU7 201 aa7.38□□□□□ -1.23
SPIDR-212ENST00000519661 PKIGQ9Y2B9 76 aa7.38□□□□□ -1.23
SPIDR-212ENST00000519661 IGLV5-45A0A087WSX0 123 aa7.37□□□□□ -1.23
SPIDR-212ENST00000519661 APOMO95445 188 aa7.37□□□□□ -1.23
SPIDR-212ENST00000519661 RNF151Q2KHN1 245 aa7.37□□□□□ -1.23
SPIDR-212ENST00000519661 CBLN2Q8IUK8 224 aa7.37□□□□□ -1.23
SPIDR-212ENST00000519661 CIRBP-AS1Q8TBR5 109 aa7.37□□□□□ -1.23
SPIDR-212ENST00000519661 C2orf88Q9BSF0 95 aa7.37□□□□□ -1.23
SPIDR-212ENST00000519661 VCX2Q9H322 139 aa7.37□□□□□ -1.23
SPIDR-212ENST00000519661 SRRM2Q9UQ35 2752 aaKnown RBP7.37□□□□□ -1.23
SPIDR-212ENST00000519661 LINC00614P0C842 121 aa7.36□□□□□ -1.23
SPIDR-212ENST00000519661 SEC11AP67812 179 aa7.36□□□□□ -1.23
SPIDR-212ENST00000519661 SPACA4Q8TDM5 124 aa7.36□□□□□ -1.23
SPIDR-212ENST00000519661 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.36□□□□□ -1.23
SPIDR-212ENST00000519661 PANO1I0J062 215 aa7.35□□□□□ -1.23
SPIDR-212ENST00000519661 RAB5BP61020 215 aa7.35□□□□□ -1.23
SPIDR-212ENST00000519661 SYCNQ0VAF6 134 aa7.35□□□□□ -1.23
SPIDR-212ENST00000519661 KIAA0087Q14695 138 aa7.35□□□□□ -1.23
SPIDR-212ENST00000519661 HIGD2BQ4VC39 106 aa7.35□□□□□ -1.23
SPIDR-212ENST00000519661 PDZD11Q5EBL8 140 aa7.35□□□□□ -1.23
SPIDR-212ENST00000519661 FA2HQ7L5A8 372 aa7.35□□□□□ -1.23
SPIDR-212ENST00000519661 KRTAP3-3Q9BYR6 98 aa7.35□□□□□ -1.23
SPIDR-212ENST00000519661 KRTAP3-2Q9BYR7 98 aa7.35□□□□□ -1.23
SPIDR-212ENST00000519661 COLCA2A8K830 154 aa7.34□□□□□ -1.23
SPIDR-212ENST00000519661 ZNF561-AS1K7EIQ3 104 aa7.34□□□□□ -1.23
SPIDR-212ENST00000519661 MALP21145 153 aa7.34□□□□□ -1.23
SPIDR-212ENST00000519661 KRTAP10-4P60372 401 aaPredicted RBP7.34□□□□□ -1.23
SPIDR-212ENST00000519661 HERVK_113P63121 156 aa7.34□□□□□ -1.23
SPIDR-212ENST00000519661 COX6A2Q02221 97 aa7.34□□□□□ -1.23
SPIDR-212ENST00000519661 C5orf38Q86SI9 138 aa7.34□□□□□ -1.23
SPIDR-212ENST00000519661 CHCHD1Q96BP2 118 aaKnown RBP7.34□□□□□ -1.23
SPIDR-212ENST00000519661 CARD19Q96LW7 228 aa7.34□□□□□ -1.23
SPIDR-212ENST00000519661 SCGB3A1Q96QR1 104 aa7.34□□□□□ -1.23
SPIDR-212ENST00000519661 MRPL35Q9NZE8 188 aaKnown RBP7.34□□□□□ -1.23
SPIDR-212ENST00000519661 PLAC8Q9NZF1 115 aa7.34□□□□□ -1.23
SPIDR-212ENST00000519661 IGLV4-69A0A075B6H9 119 aa7.33□□□□□ -1.24
SPIDR-212ENST00000519661 ODF1Q14990 250 aa7.33□□□□□ -1.24
SPIDR-212ENST00000519661 Q5VSD8 79 aa7.33□□□□□ -1.24
SPIDR-212ENST00000519661 CST9LQ9H4G1 147 aa7.33□□□□□ -1.24
SPIDR-212ENST00000519661 LINC00474Q9P2X8 69 aa7.33□□□□□ -1.24
SPIDR-212ENST00000519661 TINCRA0A1B0GVN0 87 aa7.32□□□□□ -1.24
SPIDR-212ENST00000519661 HBDP02042 147 aa7.32□□□□□ -1.24
SPIDR-212ENST00000519661 TLX1NBP0CAT3 122 aa7.32□□□□□ -1.24
SPIDR-212ENST00000519661 SPAG11BQ08648 103 aa7.32□□□□□ -1.24
SPIDR-212ENST00000519661 PMVKQ15126 192 aa7.32□□□□□ -1.24
SPIDR-212ENST00000519661 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.31□□□□□ -1.24
SPIDR-212ENST00000519661 FAM229AH3BQW9 127 aa7.31□□□□□ -1.24
SPIDR-212ENST00000519661 ZC2HC1BQ5TFG8 222 aa7.31□□□□□ -1.24
SPIDR-212ENST00000519661 Q6ZRU5 148 aa7.31□□□□□ -1.24
SPIDR-212ENST00000519661 Q8IZM0 81 aa7.31□□□□□ -1.24
SPIDR-212ENST00000519661 ORAOV1Q8WV07 137 aa7.31□□□□□ -1.24
SPIDR-212ENST00000519661 LINC00528Q8N1L1 170 aa7.3□□□□□ -1.24
SPIDR-212ENST00000519661 LINC00526Q96FQ7 95 aa7.3□□□□□ -1.24
SPIDR-212ENST00000519661 CAMK2N2Q96S95 79 aa7.3□□□□□ -1.24
SPIDR-212ENST00000519661 CDKN2A-AS1Q9UH64 79 aa7.3□□□□□ -1.24
SPIDR-212ENST00000519661 MYCBP2O75592 4640 aa7.29□□□□□ -1.24
SPIDR-212ENST00000519661 A0A087WYN8 130 aa7.29□□□□□ -1.24
SPIDR-212ENST00000519661 A0A096LNI7 61 aa7.29□□□□□ -1.24
SPIDR-212ENST00000519661 TRBV30A0A0K0K1B3 111 aa7.29□□□□□ -1.24
SPIDR-212ENST00000519661 ATP5LO75964 103 aa7.29□□□□□ -1.24
SPIDR-212ENST00000519661 TRGC2P03986 189 aa7.29□□□□□ -1.24
SPIDR-212ENST00000519661 IGLC3P0DOY3 106 aa7.29□□□□□ -1.24
SPIDR-212ENST00000519661 LINC00310P59036 64 aa7.29□□□□□ -1.24
SPIDR-212ENST00000519661 HAMPP81172 84 aa7.29□□□□□ -1.24
SPIDR-212ENST00000519661 A0A0J9YXV3 536 aa7.28□□□□□ -1.24
SPIDR-212ENST00000519661 LOC107984640A0A0U1RRK4 108 aa7.28□□□□□ -1.24
SPIDR-212ENST00000519661 SMIM1B2RUZ4 78 aa7.28□□□□□ -1.24
SPIDR-212ENST00000519661 NDUFA1O15239 70 aa7.28□□□□□ -1.24
SPIDR-212ENST00000519661 SMR3BP02814 79 aaPredicted RBP7.28□□□□□ -1.24
SPIDR-212ENST00000519661 PLA2G1BP04054 148 aaKnown RBP7.28□□□□□ -1.24
SPIDR-212ENST00000519661 PTTG1IPP53801 180 aa7.28□□□□□ -1.24
SPIDR-212ENST00000519661 TRAV12-1A0A0B4J245 112 aa7.27□□□□□ -1.25
SPIDR-212ENST00000519661 IGLV5-39A0A0G2JS06 123 aa7.27□□□□□ -1.25
SPIDR-212ENST00000519661 CHTF8P0CG12 524 aa7.27□□□□□ -1.25
SPIDR-212ENST00000519661 GEMIN7Q9H840 131 aaKnown RBP7.27□□□□□ -1.25
SPIDR-212ENST00000519661 C6orf48Q9UBA6 75 aa7.27□□□□□ -1.25
SPIDR-212ENST00000519661 CXCL5P42830 114 aa7.26□□□□□ -1.25
SPIDR-212ENST00000519661 C10orf25Q5T742 122 aa7.26□□□□□ -1.25
SPIDR-212ENST00000519661 UNQ6190/PRO20217Q6UXQ8 127 aa7.25□□□□□ -1.25
SPIDR-212ENST00000519661 PMCHL1Q16048 86 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 163.2 ms