RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 K7EP13 123 aa9.97□□□□□ -0.81
CLN8-204ENST00000519254 TAX1BP3O14907 124 aa9.97□□□□□ -0.81
CLN8-204ENST00000519254 GCSHP23434 173 aa9.97□□□□□ -0.81
CLN8-204ENST00000519254 FXYD2P54710 66 aa9.97□□□□□ -0.81
CLN8-204ENST00000519254 SCGB1D4Q6XE38 83 aa9.97□□□□□ -0.81
CLN8-204ENST00000519254 CEND1Q8N111 149 aa9.97□□□□□ -0.81
CLN8-204ENST00000519254 TM2D2Q9BX73 214 aa9.97□□□□□ -0.81
CLN8-204ENST00000519254 IGLL5B9A064 214 aa9.96□□□□□ -0.81
CLN8-204ENST00000519254 H3BNG1 76 aa9.96□□□□□ -0.81
CLN8-204ENST00000519254 HIST1H4GQ99525 98 aa9.96□□□□□ -0.81
CLN8-204ENST00000519254 FBN3Q75N90 2809 aa9.96□□□□□ -0.81
CLN8-204ENST00000519254 STAB2Q8WWQ8 2551 aa9.96□□□□□ -0.82
CLN8-204ENST00000519254 A0A1B0GUV1 79 aa9.96□□□□□ -0.82
CLN8-204ENST00000519254 H3BRM9 83 aa9.96□□□□□ -0.82
CLN8-204ENST00000519254 A6NDN8 102 aa9.95□□□□□ -0.82
CLN8-204ENST00000519254 RBX1P62877 108 aa9.95□□□□□ -0.82
CLN8-204ENST00000519254 COX11Q9Y6N1 276 aa9.95□□□□□ -0.82
CLN8-204ENST00000519254 TMEM262E9PQX1 116 aa9.94□□□□□ -0.82
CLN8-204ENST00000519254 SH2D6Q7Z4S9 175 aa9.94□□□□□ -0.82
CLN8-204ENST00000519254 IGLV5-39A0A0G2JS06 123 aa9.93□□□□□ -0.82
CLN8-204ENST00000519254 C10orf126Q8N4M7 172 aa9.93□□□□□ -0.82
CLN8-204ENST00000519254 IGKV3OR2-268A0A0C4DH90 116 aa9.93□□□□□ -0.82
CLN8-204ENST00000519254 SMIM1B2RUZ4 78 aa9.92□□□□□ -0.82
CLN8-204ENST00000519254 SPANXB1Q9NS25 103 aaPredicted RBP9.92□□□□□ -0.82
CLN8-204ENST00000519254 PTTG1IPP53801 180 aa9.91□□□□□ -0.82
CLN8-204ENST00000519254 ZFAND6Q6FIF0 208 aa9.91□□□□□ -0.82
CLN8-204ENST00000519254 LYPD5Q6UWN5 251 aa9.91□□□□□ -0.82
CLN8-204ENST00000519254 C15orf53Q8NAA6 179 aa9.91□□□□□ -0.82
CLN8-204ENST00000519254 NDUFA12Q9UI09 145 aa9.91□□□□□ -0.82
CLN8-204ENST00000519254 A0A0J9YXY3 114 aa9.91□□□□□ -0.82
CLN8-204ENST00000519254 LINC00959A0A1B0GUT2 108 aa9.91□□□□□ -0.82
CLN8-204ENST00000519254 SRSF9Q13242 221 aaKnown RBP eCLIP9.91□□□□□ -0.82
CLN8-204ENST00000519254 LELP1Q5T871 98 aa9.91□□□□□ -0.82
CLN8-204ENST00000519254 Q8N3U1 123 aa9.9□□□□□ -0.82
CLN8-204ENST00000519254 IGHV3OR16-9A0A0B4J2B5 98 aa9.89□□□□□ -0.83
CLN8-204ENST00000519254 NUPR2A6NF83 97 aa9.89□□□□□ -0.83
CLN8-204ENST00000519254 SMIM13P0DJ93 91 aa9.89□□□□□ -0.83
CLN8-204ENST00000519254 ESRGQ1W209 222 aa9.89□□□□□ -0.83
CLN8-204ENST00000519254 NHP2Q9NX24 153 aaKnown RBP9.89□□□□□ -0.83
CLN8-204ENST00000519254 K7ERJ3 54 aa9.88□□□□□ -0.83
CLN8-204ENST00000519254 IGHV3-30P01768 117 aa9.88□□□□□ -0.83
CLN8-204ENST00000519254 IGHV3-30-5P0DP03 117 aa9.88□□□□□ -0.83
CLN8-204ENST00000519254 NDUFA1O15239 70 aa9.88□□□□□ -0.83
CLN8-204ENST00000519254 RAB37Q96AX2 223 aa9.88□□□□□ -0.83
CLN8-204ENST00000519254 LITAFQ99732 161 aa9.88□□□□□ -0.83
CLN8-204ENST00000519254 C9orf118A6NHY6 69 aa9.87□□□□□ -0.83
CLN8-204ENST00000519254 KLK5Q9Y337 293 aaPredicted RBP9.87□□□□□ -0.83
CLN8-204ENST00000519254 A0A1B0GWB2 263 aa9.86□□□□□ -0.83
CLN8-204ENST00000519254 CLPSL2Q6UWE3 100 aa9.86□□□□□ -0.83
CLN8-204ENST00000519254 LINC00269Q8N2A0 174 aa9.86□□□□□ -0.83
CLN8-204ENST00000519254 A0A087WZ39 114 aa9.86□□□□□ -0.83
CLN8-204ENST00000519254 TMEM238C9JI98 176 aa9.86□□□□□ -0.83
CLN8-204ENST00000519254 SS18Q15532 418 aa9.86□□□□□ -0.83
CLN8-204ENST00000519254 CCL25O15444 150 aa9.85□□□□□ -0.83
CLN8-204ENST00000519254 ANGP03950 147 aaKnown RBP9.85□□□□□ -0.83
CLN8-204ENST00000519254 ADAMTSL4-AS1Q5T5F5 129 aa9.85□□□□□ -0.83
CLN8-204ENST00000519254 WFDC10BQ8IUB3 73 aa9.85□□□□□ -0.83
CLN8-204ENST00000519254 CCL18P55774 89 aa9.84□□□□□ -0.83
CLN8-204ENST00000519254 C5orf38Q86SI9 138 aa9.84□□□□□ -0.83
CLN8-204ENST00000519254 ZNF625Q96I27 306 aaPredicted RBP9.84□□□□□ -0.83
CLN8-204ENST00000519254 NAA38Q9BRA0 125 aaKnown RBP9.84□□□□□ -0.83
CLN8-204ENST00000519254 Q9H8V8 135 aa9.84□□□□□ -0.83
CLN8-204ENST00000519254 APLNQ9ULZ1 77 aa9.84□□□□□ -0.83
CLN8-204ENST00000519254 H3BUT2 72 aa9.83□□□□□ -0.84
CLN8-204ENST00000519254 XCL1P47992 114 aa9.83□□□□□ -0.84
CLN8-204ENST00000519254 REG3AQ06141 175 aa9.83□□□□□ -0.84
CLN8-204ENST00000519254 MUC7Q8TAX7 377 aa9.83□□□□□ -0.84
CLN8-204ENST00000519254 WWC2-AS2Q96NR7 200 aa9.83□□□□□ -0.84
CLN8-204ENST00000519254 LINC00588Q9Y4M8 146 aa9.83□□□□□ -0.84
CLN8-204ENST00000519254 TMEM238LA0A1B0GVL6 79 aa9.83□□□□□ -0.84
CLN8-204ENST00000519254 A6NJY4 79 aa9.83□□□□□ -0.84
CLN8-204ENST00000519254 TIMM17BO60830 172 aa9.83□□□□□ -0.84
CLN8-204ENST00000519254 MUSTN1Q8IVN3 82 aa9.83□□□□□ -0.84
CLN8-204ENST00000519254 IGHV3-33P01772 117 aa9.82□□□□□ -0.84
CLN8-204ENST00000519254 VAMP3Q15836 100 aa9.82□□□□□ -0.84
CLN8-204ENST00000519254 COX7B2Q8TF08 81 aa9.82□□□□□ -0.84
CLN8-204ENST00000519254 SPANXDQ9BXN6 97 aa9.82□□□□□ -0.84
CLN8-204ENST00000519254 SPANXCQ9NY87 97 aa9.82□□□□□ -0.84
CLN8-204ENST00000519254 TGP01266 2768 aa9.81□□□□□ -0.84
CLN8-204ENST00000519254 UBE2DNLQ8IWF7 75 aa9.8□□□□□ -0.84
CLN8-204ENST00000519254 CHCHD10Q8WYQ3 142 aaPredicted RBP9.8□□□□□ -0.84
CLN8-204ENST00000519254 CFC1BP0CG36 223 aa9.8□□□□□ -0.84
CLN8-204ENST00000519254 CFC1P0CG37 223 aa9.8□□□□□ -0.84
CLN8-204ENST00000519254 UBE2V1Q13404 147 aa9.8□□□□□ -0.84
CLN8-204ENST00000519254 MIAQ16674 131 aa9.8□□□□□ -0.84
CLN8-204ENST00000519254 CD164L2Q6UWJ8 174 aa9.8□□□□□ -0.84
CLN8-204ENST00000519254 PRR34Q9NV39 138 aa9.8□□□□□ -0.84
CLN8-204ENST00000519254 DNAH7Q8WXX0 4024 aa9.79□□□□□ -0.84
CLN8-204ENST00000519254 IGLV10-54A0A075B6I4 117 aa9.79□□□□□ -0.84
CLN8-204ENST00000519254 A4D1N5 150 aa9.79□□□□□ -0.84
CLN8-204ENST00000519254 LINC01561Q8N1V8 128 aa9.79□□□□□ -0.84
CLN8-204ENST00000519254 TOMM7Q9P0U1 55 aa9.79□□□□□ -0.84
CLN8-204ENST00000519254 KLK12Q9UKR0 248 aa9.79□□□□□ -0.84
CLN8-204ENST00000519254 A0A1W2PPM0 123 aa9.78□□□□□ -0.84
CLN8-204ENST00000519254 EIF4EBP3O60516 100 aaPredicted RBP9.78□□□□□ -0.84
CLN8-204ENST00000519254 APOMO95445 188 aa9.78□□□□□ -0.84
CLN8-204ENST00000519254 PRSS2P07478 247 aa9.78□□□□□ -0.84
CLN8-204ENST00000519254 HERV-K104P63124 156 aa9.78□□□□□ -0.84
CLN8-204ENST00000519254 RPL24P83731 157 aaKnown RBP9.78□□□□□ -0.84
CLN8-204ENST00000519254 CSMD3Q7Z407 3707 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms