RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 LINC00337Q8N6G1 96 aa3.32□□□□□ -1.88
HMGB1P19-201ENST00000517578 C11orf72Q8NBR9 251 aa3.32□□□□□ -1.88
HMGB1P19-201ENST00000517578 B9D2Q9BPU9 175 aa3.32□□□□□ -1.88
HMGB1P19-201ENST00000517578 CDC42SE2Q9NRR3 84 aa3.32□□□□□ -1.88
HMGB1P19-201ENST00000517578 KAAG1Q9UBP8 84 aa3.32□□□□□ -1.88
HMGB1P19-201ENST00000517578 ZNF580Q9UK33 172 aa3.32□□□□□ -1.88
HMGB1P19-201ENST00000517578 COL27A1Q8IZC6 1860 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P19-201ENST00000517578 PRRC2BQ5JSZ5 2229 aaKnown RBP3.31□□□□□ -1.88
HMGB1P19-201ENST00000517578 IGLV3-9A0A075B6K5 115 aa3.31□□□□□ -1.88
HMGB1P19-201ENST00000517578 IGKV2-28A0A075B6P5 120 aa3.31□□□□□ -1.88
HMGB1P19-201ENST00000517578 ETDCA0A1B0GVM5 59 aa3.31□□□□□ -1.88
HMGB1P19-201ENST00000517578 KLLNB2CW77 178 aa3.31□□□□□ -1.88
HMGB1P19-201ENST00000517578 SMIM1B2RUZ4 78 aa3.31□□□□□ -1.88
HMGB1P19-201ENST00000517578 IGKV2D-28P01615 120 aa3.31□□□□□ -1.88
HMGB1P19-201ENST00000517578 TFF1P04155 84 aa3.31□□□□□ -1.88
HMGB1P19-201ENST00000517578 IGHV4-31P0DP07 118 aa3.31□□□□□ -1.88
HMGB1P19-201ENST00000517578 IGHV1-2P23083 117 aa3.31□□□□□ -1.88
HMGB1P19-201ENST00000517578 LINC00313P59037 77 aa3.31□□□□□ -1.88
HMGB1P19-201ENST00000517578 COX7B2Q8TF08 81 aa3.31□□□□□ -1.88
HMGB1P19-201ENST00000517578 PRR15LQ9BU68 103 aa3.31□□□□□ -1.88
HMGB1P19-201ENST00000517578 HIGD2AQ9BW72 106 aa3.31□□□□□ -1.88
HMGB1P19-201ENST00000517578 CNTRLQ7Z7A1 2325 aa3.3□□□□□ -1.88
HMGB1P19-201ENST00000517578 PRR14LQ5THK1 2151 aa3.3□□□□□ -1.88
HMGB1P19-201ENST00000517578 IGHV3-49A0A0A0MS15 119 aa3.3□□□□□ -1.88
HMGB1P19-201ENST00000517578 K7EQG2 157 aa3.3□□□□□ -1.88
HMGB1P19-201ENST00000517578 IGLV1-47P01700 117 aa3.3□□□□□ -1.88
HMGB1P19-201ENST00000517578 COX7BP24311 80 aa3.3□□□□□ -1.88
HMGB1P19-201ENST00000517578 COX17Q14061 63 aa3.3□□□□□ -1.88
HMGB1P19-201ENST00000517578 DEFB133Q30KQ1 61 aa3.3□□□□□ -1.88
HMGB1P19-201ENST00000517578 LINC00242Q5T6M2 205 aa3.3□□□□□ -1.88
HMGB1P19-201ENST00000517578 IGFL3Q6UXB1 125 aa3.3□□□□□ -1.88
HMGB1P19-201ENST00000517578 Q6ZTI0 123 aa3.3□□□□□ -1.88
HMGB1P19-201ENST00000517578 NOTCH2NLQ7Z3S9 236 aa3.3□□□□□ -1.88
HMGB1P19-201ENST00000517578 DEFB108BQ8NET1 73 aa3.3□□□□□ -1.88
HMGB1P19-201ENST00000517578 ZCCHC13Q8WW36 166 aaKnown RBP3.3□□□□□ -1.88
HMGB1P19-201ENST00000517578 LINC00208Q96KT6 92 aa3.3□□□□□ -1.88
HMGB1P19-201ENST00000517578 TRGV2A0A075B6R0 118 aa3.29□□□□□ -1.88
HMGB1P19-201ENST00000517578 IGHV3-16A0A0C4DH30 117 aa3.29□□□□□ -1.88
HMGB1P19-201ENST00000517578 CLPSL1A2RUU4 121 aa3.29□□□□□ -1.88
HMGB1P19-201ENST00000517578 APELAP0DMC3 54 aa3.29□□□□□ -1.88
HMGB1P19-201ENST00000517578 CCL18P55774 89 aa3.29□□□□□ -1.88
HMGB1P19-201ENST00000517578 HIGD2BQ4VC39 106 aa3.29□□□□□ -1.88
HMGB1P19-201ENST00000517578 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P19-201ENST00000517578 LINC00575Q6W349 94 aa3.29□□□□□ -1.88
HMGB1P19-201ENST00000517578 PRSS33Q8NF86 280 aa3.29□□□□□ -1.88
HMGB1P19-201ENST00000517578 RETNLBQ9BQ08 111 aa3.29□□□□□ -1.88
HMGB1P19-201ENST00000517578 CHCHD7Q9BUK0 85 aa3.29□□□□□ -1.88
HMGB1P19-201ENST00000517578 DPM3Q9P2X0 92 aa3.29□□□□□ -1.88
HMGB1P19-201ENST00000517578 SDK2Q58EX2 2172 aa3.29□□□□□ -1.88
HMGB1P19-201ENST00000517578 IGHV3-72A0A0B4J1Y9 119 aa3.28□□□□□ -1.88
HMGB1P19-201ENST00000517578 LRCOL1A6NCL2 159 aa3.28□□□□□ -1.88
HMGB1P19-201ENST00000517578 CCL24O00175 119 aa3.28□□□□□ -1.88
HMGB1P19-201ENST00000517578 CCL3L1P16619 93 aa3.28□□□□□ -1.88
HMGB1P19-201ENST00000517578 FBXL19-AS1Q494R0 122 aa3.28□□□□□ -1.88
HMGB1P19-201ENST00000517578 PRR9Q5T870 116 aa3.28□□□□□ -1.88
HMGB1P19-201ENST00000517578 TTTY12Q9BZ98 90 aa3.28□□□□□ -1.88
HMGB1P19-201ENST00000517578 NAV3Q8IVL0 2385 aa3.27□□□□□ -1.89
HMGB1P19-201ENST00000517578 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P19-201ENST00000517578 IGHV3-73A0A0B4J1V6 119 aa3.27□□□□□ -1.89
HMGB1P19-201ENST00000517578 IGHV3-35A0A0C4DH35 117 aa3.27□□□□□ -1.89
HMGB1P19-201ENST00000517578 NDUFA4O00483 81 aa3.27□□□□□ -1.89
HMGB1P19-201ENST00000517578 IGHV1-46P01743 117 aa3.27□□□□□ -1.89
HMGB1P19-201ENST00000517578 IGKV4-1P06312 121 aa3.27□□□□□ -1.89
HMGB1P19-201ENST00000517578 MOBPQ13875 183 aa3.27□□□□□ -1.89
HMGB1P19-201ENST00000517578 ODF3L2Q3SX64 289 aa3.27□□□□□ -1.89
HMGB1P19-201ENST00000517578 MINOS1Q5TGZ0 78 aa3.27□□□□□ -1.89
HMGB1P19-201ENST00000517578 FAM104AQ969W3 186 aa3.27□□□□□ -1.89
HMGB1P19-201ENST00000517578 WFDC10AQ9H1F0 79 aa3.27□□□□□ -1.89
HMGB1P19-201ENST00000517578 ZNRD1Q9P1U0 126 aa3.27□□□□□ -1.89
HMGB1P19-201ENST00000517578 LINC01558Q9Y6Z2 57 aa3.27□□□□□ -1.89
HMGB1P19-201ENST00000517578 ASCC3Q8N3C0 2202 aaKnown RBP3.26□□□□□ -1.89
HMGB1P19-201ENST00000517578 IGHV3OR16-12A0A075B7B8 117 aa3.26□□□□□ -1.89
HMGB1P19-201ENST00000517578 IGHV7-81A0A0B4J1V7 117 aa3.26□□□□□ -1.89
HMGB1P19-201ENST00000517578 IGHV3-53P01767 116 aa3.26□□□□□ -1.89
HMGB1P19-201ENST00000517578 PRR3P79522 188 aaKnown RBP3.26□□□□□ -1.89
HMGB1P19-201ENST00000517578 C6orf99Q4VX62 202 aa3.26□□□□□ -1.89
HMGB1P19-201ENST00000517578 RNASE13Q5GAN3 156 aaKnown RBP3.26□□□□□ -1.89
HMGB1P19-201ENST00000517578 LINC00467Q9BRT7 94 aa3.26□□□□□ -1.89
HMGB1P19-201ENST00000517578 MED13Q9UHV7 2174 aa3.25□□□□□ -1.89
HMGB1P19-201ENST00000517578 IGKV2D-30A0A075B6S6 120 aa3.25□□□□□ -1.89
HMGB1P19-201ENST00000517578 IGHV4-30-2A0A087WSY4 118 aa3.25□□□□□ -1.89
HMGB1P19-201ENST00000517578 IGHV6-1A0A0B4J1U7 121 aa3.25□□□□□ -1.89
HMGB1P19-201ENST00000517578 COX6A2Q02221 97 aa3.25□□□□□ -1.89
HMGB1P19-201ENST00000517578 BSPH1Q075Z2 132 aa3.25□□□□□ -1.89
HMGB1P19-201ENST00000517578 ZNF843Q8N446 348 aa3.25□□□□□ -1.89
HMGB1P19-201ENST00000517578 XAGE1AQ9HD64 81 aa3.25□□□□□ -1.89
HMGB1P19-201ENST00000517578 MINOS1-NBL1R4GNA1 71 aa3.25□□□□□ -1.89
HMGB1P19-201ENST00000517578 SVILO95425 2214 aa3.25□□□□□ -1.89
HMGB1P19-201ENST00000517578 F5P12259 2224 aa3.24□□□□□ -1.89
HMGB1P19-201ENST00000517578 PINLYPA6NC86 204 aa3.24□□□□□ -1.89
HMGB1P19-201ENST00000517578 H3BUA1 57 aa3.24□□□□□ -1.89
HMGB1P19-201ENST00000517578 CNBPP62633 177 aaKnown RBP3.24□□□□□ -1.89
HMGB1P19-201ENST00000517578 SPAG11BQ08648 103 aa3.24□□□□□ -1.89
HMGB1P19-201ENST00000517578 SPINK14Q6IE38 97 aa3.24□□□□□ -1.89
HMGB1P19-201ENST00000517578 CNEP1R1Q8N9A8 125 aa3.24□□□□□ -1.89
HMGB1P19-201ENST00000517578 USMG5Q96IX5 58 aa3.24□□□□□ -1.89
HMGB1P19-201ENST00000517578 KCNQ1DNQ9H478 68 aa3.24□□□□□ -1.89
HMGB1P19-201ENST00000517578 MAP6D1Q9H9H5 199 aa3.24□□□□□ -1.89
HMGB1P19-201ENST00000517578 MUC4Q99102 2169 aa3.24□□□□□ -1.89
HMGB1P19-201ENST00000517578 CADP27708 2225 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms