RNA–Protein interactions for RNA: ENST00000517402.1

HOXA11-202, Transcript of homeobox A11, humanhuman

TSL 1 (best)

Gene HOXA11, Length 2,137 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-202ENST00000517402 ATP6V0E2Q8NHE4 81 aa13.75□□□□□ -0.21
HOXA11-202ENST00000517402 A4D1N5 150 aa13.74□□□□□ -0.21
HOXA11-202ENST00000517402 SMAGPQ0VAQ4 97 aa13.74□□□□□ -0.21
HOXA11-202ENST00000517402 H7C423 109 aa13.73□□□□□ -0.21
HOXA11-202ENST00000517402 EIF4EBP3O60516 100 aaPredicted RBP13.73□□□□□ -0.21
HOXA11-202ENST00000517402 TSPAN13O95857 204 aa13.73□□□□□ -0.21
HOXA11-202ENST00000517402 IGLV5-39A0A0G2JS06 123 aa13.73□□□□□ -0.21
HOXA11-202ENST00000517402 KRTAP10-11P60412 298 aa13.72□□□□□ -0.21
HOXA11-202ENST00000517402 NPC2P61916 151 aa13.72□□□□□ -0.21
HOXA11-202ENST00000517402 F5H768 121 aa13.72□□□□□ -0.21
HOXA11-202ENST00000517402 PAX4O43316 350 aa13.72□□□□□ -0.21
HOXA11-202ENST00000517402 DAD1P61803 113 aa13.72□□□□□ -0.21
HOXA11-202ENST00000517402 COL6A5A8TX70 2615 aa13.71□□□□□ -0.21
HOXA11-202ENST00000517402 MIFP14174 115 aa13.7□□□□□ -0.22
HOXA11-202ENST00000517402 DAND5Q8N907 189 aa13.7□□□□□ -0.22
HOXA11-202ENST00000517402 RNF183Q96D59 192 aa13.7□□□□□ -0.22
HOXA11-202ENST00000517402 ZNF625Q96I27 306 aaPredicted RBP13.7□□□□□ -0.22
HOXA11-202ENST00000517402 NDUFA1O15239 70 aa13.69□□□□□ -0.22
HOXA11-202ENST00000517402 PRSS2P07478 247 aa13.69□□□□□ -0.22
HOXA11-202ENST00000517402 Q9H8V8 135 aa13.69□□□□□ -0.22
HOXA11-202ENST00000517402 H3BMG7 143 aa13.69□□□□□ -0.22
HOXA11-202ENST00000517402 C3orf56Q8N813 242 aa13.69□□□□□ -0.22
HOXA11-202ENST00000517402 RPL24P83731 157 aaKnown RBP13.68□□□□□ -0.22
HOXA11-202ENST00000517402 TRAV26-1A0A087WT03 109 aa13.67□□□□□ -0.22
HOXA11-202ENST00000517402 HTN3P15516 51 aa13.67□□□□□ -0.22
HOXA11-202ENST00000517402 MTURNQ8N3F0 131 aa13.67□□□□□ -0.22
HOXA11-202ENST00000517402 RETNQ9HD89 108 aa13.67□□□□□ -0.22
HOXA11-202ENST00000517402 LOC107984156A0A0G2JMH3 177 aa13.66□□□□□ -0.22
HOXA11-202ENST00000517402 TMEM262E9PQX1 116 aa13.66□□□□□ -0.22
HOXA11-202ENST00000517402 MIAQ16674 131 aa13.66□□□□□ -0.22
HOXA11-202ENST00000517402 PRIMA1Q86XR5 153 aa13.66□□□□□ -0.22
HOXA11-202ENST00000517402 ARL17AQ8IVW1 177 aa13.66□□□□□ -0.22
HOXA11-202ENST00000517402 SPANXDQ9BXN6 97 aa13.66□□□□□ -0.22
HOXA11-202ENST00000517402 SPANXCQ9NY87 97 aa13.66□□□□□ -0.22
HOXA11-202ENST00000517402 A0A0U1RRA0 63 aa13.66□□□□□ -0.22
HOXA11-202ENST00000517402 PRO1854Q9UHT4 67 aa13.66□□□□□ -0.22
HOXA11-202ENST00000517402 ATP5G1P05496 136 aa13.65□□□□□ -0.22
HOXA11-202ENST00000517402 CLPSL2Q6UWE3 100 aa13.64□□□□□ -0.23
HOXA11-202ENST00000517402 H7C2G1 150 aa13.64□□□□□ -0.23
HOXA11-202ENST00000517402 SPART-AS1P0CW21 52 aa13.64□□□□□ -0.23
HOXA11-202ENST00000517402 RBX1P62877 108 aa13.64□□□□□ -0.23
HOXA11-202ENST00000517402 OCIAD2Q56VL3 154 aa13.63□□□□□ -0.23
HOXA11-202ENST00000517402 Q8N3U1 123 aa13.63□□□□□ -0.23
HOXA11-202ENST00000517402 NOTCH1P46531 2555 aa13.62□□□□□ -0.23
HOXA11-202ENST00000517402 A0A0B4J2C4 111 aa13.62□□□□□ -0.23
HOXA11-202ENST00000517402 TENM3Q9P273 2699 aa13.62□□□□□ -0.23
HOXA11-202ENST00000517402 IGHV3OR16-9A0A0B4J2B5 98 aa13.61□□□□□ -0.23
HOXA11-202ENST00000517402 LINC00959A0A1B0GUT2 108 aa13.61□□□□□ -0.23
HOXA11-202ENST00000517402 IGHV3-33P01772 117 aa13.61□□□□□ -0.23
HOXA11-202ENST00000517402 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.6□□□□□ -0.23
HOXA11-202ENST00000517402 TIMM17BO60830 172 aa13.6□□□□□ -0.23
HOXA11-202ENST00000517402 SHISA2Q6UWI4 295 aa13.6□□□□□ -0.23
HOXA11-202ENST00000517402 TOMM7Q9P0U1 55 aa13.6□□□□□ -0.23
HOXA11-202ENST00000517402 DNAH3Q8TD57 4116 aa13.6□□□□□ -0.23
HOXA11-202ENST00000517402 EGFEM1PQ0D2K5 195 aa13.6□□□□□ -0.23
HOXA11-202ENST00000517402 C5orf38Q86SI9 138 aa13.6□□□□□ -0.23
HOXA11-202ENST00000517402 A0A1B0GUV1 79 aa13.58□□□□□ -0.23
HOXA11-202ENST00000517402 PSMB2P49721 201 aa13.58□□□□□ -0.23
HOXA11-202ENST00000517402 MEIG1Q5JSS6 88 aa13.58□□□□□ -0.23
HOXA11-202ENST00000517402 G3V4G9 280 aa13.58□□□□□ -0.24
HOXA11-202ENST00000517402 XCL1P47992 114 aa13.58□□□□□ -0.24
HOXA11-202ENST00000517402 WFDC2Q14508 124 aa13.58□□□□□ -0.24
HOXA11-202ENST00000517402 COX7B2Q8TF08 81 aa13.57□□□□□ -0.24
HOXA11-202ENST00000517402 CIRBPQ14011 172 aaKnown RBP13.57□□□□□ -0.24
HOXA11-202ENST00000517402 ERG28Q9UKR5 140 aa13.57□□□□□ -0.24
HOXA11-202ENST00000517402 TCL1BO95988 128 aa13.56□□□□□ -0.24
HOXA11-202ENST00000517402 Q1RN00 199 aa13.56□□□□□ -0.24
HOXA11-202ENST00000517402 PRO0461Q9UI25 63 aa13.56□□□□□ -0.24
HOXA11-202ENST00000517402 A0A087WZ39 114 aa13.55□□□□□ -0.24
HOXA11-202ENST00000517402 RNF151Q2KHN1 245 aa13.55□□□□□ -0.24
HOXA11-202ENST00000517402 LINC00308Q8TCZ7 52 aa13.55□□□□□ -0.24
HOXA11-202ENST00000517402 SOSTDC1Q6X4U4 206 aa13.55□□□□□ -0.24
HOXA11-202ENST00000517402 LINC00269Q8N2A0 174 aa13.55□□□□□ -0.24
HOXA11-202ENST00000517402 F8W1H4 67 aa13.54□□□□□ -0.24
HOXA11-202ENST00000517402 SCGB1C2P0DMR2 95 aa13.54□□□□□ -0.24
HOXA11-202ENST00000517402 IFITM1P13164 125 aa13.54□□□□□ -0.24
HOXA11-202ENST00000517402 HERV-K104P63124 156 aa13.52□□□□□ -0.24
HOXA11-202ENST00000517402 MRPL23Q16540 153 aaKnown RBP13.52□□□□□ -0.24
HOXA11-202ENST00000517402 ANGP03950 147 aaKnown RBP13.52□□□□□ -0.25
HOXA11-202ENST00000517402 SS18Q15532 418 aa13.52□□□□□ -0.25
HOXA11-202ENST00000517402 LYRM7Q5U5X0 104 aa13.52□□□□□ -0.25
HOXA11-202ENST00000517402 SH2D6Q7Z4S9 175 aa13.52□□□□□ -0.25
HOXA11-202ENST00000517402 C11orf68Q9H3H3 251 aaKnown RBP13.52□□□□□ -0.25
HOXA11-202ENST00000517402 ICOSQ9Y6W8 199 aa13.52□□□□□ -0.25
HOXA11-202ENST00000517402 NBEAL1Q6ZS30 2694 aa13.52□□□□□ -0.25
HOXA11-202ENST00000517402 IGLV10-54A0A075B6I4 117 aa13.51□□□□□ -0.25
HOXA11-202ENST00000517402 TEX48A0A1B0GUV7 120 aa13.51□□□□□ -0.25
HOXA11-202ENST00000517402 K7ERU9 68 aa13.51□□□□□ -0.25
HOXA11-202ENST00000517402 ETDBQ3ZM63 59 aa13.51□□□□□ -0.25
HOXA11-202ENST00000517402 TRIAP1O43715 76 aa13.5□□□□□ -0.25
HOXA11-202ENST00000517402 SMCPP49901 116 aaPredicted RBP13.49□□□□□ -0.25
HOXA11-202ENST00000517402 Q6ZTC4 211 aa13.49□□□□□ -0.25
HOXA11-202ENST00000517402 PRB2P02812 416 aaPredicted RBP13.48□□□□□ -0.25
HOXA11-202ENST00000517402 RPL13AP40429 203 aaKnown RBP13.48□□□□□ -0.25
HOXA11-202ENST00000517402 REG3AQ06141 175 aa13.48□□□□□ -0.25
HOXA11-202ENST00000517402 TRBV20-1A0A075B6N2 111 aa13.47□□□□□ -0.25
HOXA11-202ENST00000517402 LELP1Q5T871 98 aa13.47□□□□□ -0.25
HOXA11-202ENST00000517402 MIR7-3HGQ8N6C7 128 aa13.46□□□□□ -0.25
HOXA11-202ENST00000517402 CHCHD10Q8WYQ3 142 aaPredicted RBP13.46□□□□□ -0.25
HOXA11-202ENST00000517402 A0A0J9YWU9 116 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms