RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 ZNF705BP0CI00 300 aaPredicted RBP1.48□□□□□ -2.17
HERC4-215ENST00000515753 FABP2P12104 132 aa1.48□□□□□ -2.17
HERC4-215ENST00000515753 AKR1C3P42330 323 aa1.48□□□□□ -2.17
HERC4-215ENST00000515753 CKS1BP61024 79 aa1.48□□□□□ -2.17
HERC4-215ENST00000515753 SLC38A11Q08AI6 406 aa1.48□□□□□ -2.17
HERC4-215ENST00000515753 HSD17B12Q53GQ0 312 aa1.48□□□□□ -2.17
HERC4-215ENST00000515753 RPL39P5Q59GN2 51 aa1.48□□□□□ -2.17
HERC4-215ENST00000515753 PATE2Q6UY27 113 aa1.48□□□□□ -2.17
HERC4-215ENST00000515753 LINC00305Q7Z4B0 112 aa1.48□□□□□ -2.17
HERC4-215ENST00000515753 C6orf201Q7Z4U5 140 aa1.48□□□□□ -2.17
HERC4-215ENST00000515753 TSC22D3Q99576 134 aa1.48□□□□□ -2.17
HERC4-215ENST00000515753 BANF2Q9H503 90 aa1.48□□□□□ -2.17
HERC4-215ENST00000515753 C14orf132Q9NPU4 83 aa1.48□□□□□ -2.17
HERC4-215ENST00000515753 SCN3BQ9NY72 215 aa1.48□□□□□ -2.17
HERC4-215ENST00000515753 BET1LQ9NYM9 111 aa1.48□□□□□ -2.17
HERC4-215ENST00000515753 TANC2Q9HCD6 1990 aa1.48□□□□□ -2.17
HERC4-215ENST00000515753 WNK1Q9H4A3 2382 aa1.48□□□□□ -2.17
HERC4-215ENST00000515753 MAP1AP78559 2803 aaPredicted RBP1.48□□□□□ -2.17
HERC4-215ENST00000515753 RYR3Q15413 4870 aa1.47□□□□□ -2.17
HERC4-215ENST00000515753 TRAV30A0A087WSZ9 112 aa1.47□□□□□ -2.17
HERC4-215ENST00000515753 PIGBOS1A0A0B4J2F0 54 aa1.47□□□□□ -2.17
HERC4-215ENST00000515753 C17orf112F2Z3M2 114 aa1.47□□□□□ -2.17
HERC4-215ENST00000515753 F8W036 122 aa1.47□□□□□ -2.17
HERC4-215ENST00000515753 M0R129 80 aa1.47□□□□□ -2.17
HERC4-215ENST00000515753 DPM2O94777 84 aa1.47□□□□□ -2.17
HERC4-215ENST00000515753 SPART-AS1P0CW21 52 aa1.47□□□□□ -2.17
HERC4-215ENST00000515753 TRAPPC2P0DI81 140 aa1.47□□□□□ -2.17
HERC4-215ENST00000515753 TRAPPC2BP0DI82 140 aa1.47□□□□□ -2.17
HERC4-215ENST00000515753 SAA1P0DJI8 122 aaPredicted RBP1.47□□□□□ -2.17
HERC4-215ENST00000515753 DEFB135Q30KP9 77 aa1.47□□□□□ -2.17
HERC4-215ENST00000515753 UBE2DNLQ8IWF7 75 aa1.47□□□□□ -2.17
HERC4-215ENST00000515753 C8orf59Q8N0T1 100 aaPredicted RBP1.47□□□□□ -2.17
HERC4-215ENST00000515753 C9orf163Q8N9P6 203 aa1.47□□□□□ -2.17
HERC4-215ENST00000515753 LSM10Q969L4 123 aaKnown RBP1.47□□□□□ -2.17
HERC4-215ENST00000515753 RHPN1-AS1Q9BWJ2 59 aa1.47□□□□□ -2.17
HERC4-215ENST00000515753 KRTAP4-1Q9BYQ7 146 aa1.47□□□□□ -2.17
HERC4-215ENST00000515753 LPAR5Q9H1C0 372 aa1.47□□□□□ -2.17
HERC4-215ENST00000515753 TMEM14BQ9NUH8 114 aa1.47□□□□□ -2.17
HERC4-215ENST00000515753 APLNQ9ULZ1 77 aa1.47□□□□□ -2.17
HERC4-215ENST00000515753 TPRKBQ9Y3C4 175 aa1.47□□□□□ -2.17
HERC4-215ENST00000515753 LY96Q9Y6Y9 160 aa1.47□□□□□ -2.17
HERC4-215ENST00000515753 DOCK11Q5JSL3 2073 aa1.47□□□□□ -2.17
HERC4-215ENST00000515753 DEFB131BA0A096LNP1 70 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 TRAV1-2A0A0B4J238 106 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 TRAV13-1A0A0B4J241 112 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 TRBV27A0A0K0K1C4 114 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 LOC107984640A0A0U1RRK4 108 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 C9JAW5 83 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 H3BMG7 143 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 H3BRN7 92 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 GNG7O60262 68 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 PRH1P02810 166 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 MGST1P10620 155 aaKnown RBP1.46□□□□□ -2.18
HERC4-215ENST00000515753 HIST1H1DP16402 221 aaKnown RBP1.46□□□□□ -2.18
HERC4-215ENST00000515753 SNCAP37840 140 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 CCL18P55774 89 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 GNG2P59768 71 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 SNRPD3P62318 126 aaKnown RBP1.46□□□□□ -2.18
HERC4-215ENST00000515753 RPS25P62851 125 aaKnown RBP1.46□□□□□ -2.18
HERC4-215ENST00000515753 QRFPP83859 136 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 ELOBQ15370 118 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 TPRXLQ17RH7 258 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 Q56UQ5 140 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 C1orf134Q5TEV5 83 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 XAF1Q6GPH4 301 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 C7orf65Q6ZTY9 151 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 TCTE3Q8IZS6 198 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 C15orf53Q8NAA6 179 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 OR4B1Q8NGF8 309 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 CHCHD1Q96BP2 118 aaKnown RBP1.46□□□□□ -2.18
HERC4-215ENST00000515753 ARHGAP5-AS1Q96IT6 56 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 SLC50A1Q9BRV3 221 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 PDCD10Q9BUL8 212 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 CST9LQ9H4G1 147 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 COPZ2Q9P299 210 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 HSPB8Q9UJY1 196 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 HIGD1AQ9Y241 93 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 DNAH9Q9NYC9 4486 aa1.46□□□□□ -2.18
HERC4-215ENST00000515753 A0A1B0GW64 132 aa1.45□□□□□ -2.18
HERC4-215ENST00000515753 IGLC7A0M8Q6 106 aa1.45□□□□□ -2.18
HERC4-215ENST00000515753 IFITM5A6NNB3 132 aa1.45□□□□□ -2.18
HERC4-215ENST00000515753 K7ERJ3 54 aa1.45□□□□□ -2.18
HERC4-215ENST00000515753 LYRM1O43325 122 aa1.45□□□□□ -2.18
HERC4-215ENST00000515753 CFDP00746 253 aaPredicted RBP1.45□□□□□ -2.18
HERC4-215ENST00000515753 PPYP01298 95 aa1.45□□□□□ -2.18
HERC4-215ENST00000515753 APELAP0DMC3 54 aa1.45□□□□□ -2.18
HERC4-215ENST00000515753 EVI2AP22794 236 aa1.45□□□□□ -2.18
HERC4-215ENST00000515753 RAB5CP51148 216 aa1.45□□□□□ -2.18
HERC4-215ENST00000515753 DEFB131AP59861 70 aa1.45□□□□□ -2.18
HERC4-215ENST00000515753 KRTAP12-4P60329 112 aa1.45□□□□□ -2.18
HERC4-215ENST00000515753 MRPS36P82909 103 aaKnown RBP1.45□□□□□ -2.18
HERC4-215ENST00000515753 ZNF846Q147U1 533 aa1.45□□□□□ -2.18
HERC4-215ENST00000515753 IDO2Q6ZQW0 420 aa1.45□□□□□ -2.18
HERC4-215ENST00000515753 OR5H6Q8NGV6 325 aa1.45□□□□□ -2.18
HERC4-215ENST00000515753 DIRC1Q969H9 104 aa1.45□□□□□ -2.18
HERC4-215ENST00000515753 PRELID3AQ96N28 172 aa1.45□□□□□ -2.18
HERC4-215ENST00000515753 PFDN5Q99471 154 aa1.45□□□□□ -2.18
HERC4-215ENST00000515753 TXNDC17Q9BRA2 123 aa1.45□□□□□ -2.18
HERC4-215ENST00000515753 WFDC10AQ9H1F0 79 aa1.45□□□□□ -2.18
HERC4-215ENST00000515753 ATG5Q9H1Y0 275 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms