RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 MUC2Q02817 5179 aa13.7□□□□□ -0.22
SMAD1-214ENST00000514831 A0A0U1RQV1 116 aa13.69□□□□□ -0.22
SMAD1-214ENST00000514831 UNQ6190/PRO20217Q6UXQ8 127 aa13.69□□□□□ -0.22
SMAD1-214ENST00000514831 KRTAP7-1Q8IUC3 87 aa13.69□□□□□ -0.22
SMAD1-214ENST00000514831 TCTE3Q8IZS6 198 aa13.69□□□□□ -0.22
SMAD1-214ENST00000514831 FAM104AQ969W3 186 aa13.69□□□□□ -0.22
SMAD1-214ENST00000514831 M0QXV9 152 aa13.68□□□□□ -0.22
SMAD1-214ENST00000514831 TCAPO15273 167 aa13.67□□□□□ -0.22
SMAD1-214ENST00000514831 RPL39P62891 51 aaKnown RBP13.67□□□□□ -0.22
SMAD1-214ENST00000514831 RPL32P62910 135 aaKnown RBP13.67□□□□□ -0.22
SMAD1-214ENST00000514831 BLOC1S1P78537 153 aa13.67□□□□□ -0.22
SMAD1-214ENST00000514831 MRPL51Q4U2R6 128 aaKnown RBP13.67□□□□□ -0.22
SMAD1-214ENST00000514831 GAGE2EQ4V326 116 aa13.67□□□□□ -0.22
SMAD1-214ENST00000514831 C20orf78Q9BR46 151 aa13.67□□□□□ -0.22
SMAD1-214ENST00000514831 SPANXA1Q9NS26 97 aa13.67□□□□□ -0.22
SMAD1-214ENST00000514831 GAGE2DQ9UEU5 116 aa13.67□□□□□ -0.22
SMAD1-214ENST00000514831 V9GYV3 84 aa13.67□□□□□ -0.22
SMAD1-214ENST00000514831 UBE2BP63146 152 aa13.66□□□□□ -0.22
SMAD1-214ENST00000514831 KRTAP9-2Q9BYQ4 174 aa13.66□□□□□ -0.22
SMAD1-214ENST00000514831 MRPS36P82909 103 aaKnown RBP13.65□□□□□ -0.22
SMAD1-214ENST00000514831 FAM104BQ5XKR9 115 aa13.65□□□□□ -0.22
SMAD1-214ENST00000514831 TRBV24-1A0A075B6N3 115 aa13.64□□□□□ -0.23
SMAD1-214ENST00000514831 HBBP68871 147 aa13.64□□□□□ -0.23
SMAD1-214ENST00000514831 CARHSP1Q9Y2V2 147 aaKnown RBP13.64□□□□□ -0.23
SMAD1-214ENST00000514831 LINC00862A6NCI5 91 aa13.63□□□□□ -0.23
SMAD1-214ENST00000514831 IFITM10A6NMD0 228 aa13.63□□□□□ -0.23
SMAD1-214ENST00000514831 ZNF727A8MUV8 499 aa13.63□□□□□ -0.23
SMAD1-214ENST00000514831 NAT8BQ9UHF3 227 aa13.63□□□□□ -0.23
SMAD1-214ENST00000514831 KIAA0087Q14695 138 aa13.62□□□□□ -0.23
SMAD1-214ENST00000514831 ALKAL2Q6UX46 152 aa13.62□□□□□ -0.23
SMAD1-214ENST00000514831 SMIM2Q9BVW6 85 aa13.61□□□□□ -0.23
SMAD1-214ENST00000514831 TGIF2-C20orf24A0A0A6YYL0 155 aa13.6□□□□□ -0.23
SMAD1-214ENST00000514831 TRBV30A0A0K0K1B3 111 aa13.6□□□□□ -0.23
SMAD1-214ENST00000514831 EIF5A2Q9GZV4 153 aaKnown RBP13.6□□□□□ -0.23
SMAD1-214ENST00000514831 NDUFC2-KCTD14E9PQ53 114 aa13.59□□□□□ -0.23
SMAD1-214ENST00000514831 TNFRSF6BO95407 300 aa13.59□□□□□ -0.23
SMAD1-214ENST00000514831 CKS2P33552 79 aa13.58□□□□□ -0.24
SMAD1-214ENST00000514831 C9orf129Q5T035 196 aaKnown RBP13.58□□□□□ -0.24
SMAD1-214ENST00000514831 FAM74A3Q4VXF1 159 aa13.57□□□□□ -0.24
SMAD1-214ENST00000514831 ZNF861PO60384 105 aa13.56□□□□□ -0.24
SMAD1-214ENST00000514831 SRP19P09132 144 aaKnown RBP13.56□□□□□ -0.24
SMAD1-214ENST00000514831 A0A1B0GW15 77 aa13.55□□□□□ -0.24
SMAD1-214ENST00000514831 C2orf82Q6UX34 121 aa13.55□□□□□ -0.24
SMAD1-214ENST00000514831 SMIM27A0A1W2PRY6 76 aa13.54□□□□□ -0.24
SMAD1-214ENST00000514831 LINC00242Q5T6M2 205 aa13.54□□□□□ -0.24
SMAD1-214ENST00000514831 PACRGQ96M98 296 aaPredicted RBP13.54□□□□□ -0.24
SMAD1-214ENST00000514831 D6R8Y8 96 aa13.53□□□□□ -0.24
SMAD1-214ENST00000514831 IFI27P40305 119 aaPredicted RBP13.53□□□□□ -0.24
SMAD1-214ENST00000514831 NUPR1O60356 82 aa13.52□□□□□ -0.25
SMAD1-214ENST00000514831 NPYP01303 97 aa13.52□□□□□ -0.25
SMAD1-214ENST00000514831 RPL23P62829 140 aaKnown RBP13.52□□□□□ -0.25
SMAD1-214ENST00000514831 LCE2AQ5TA79 106 aaPredicted RBP13.52□□□□□ -0.25
SMAD1-214ENST00000514831 PYGO1Q9Y3Y4 419 aa13.51□□□□□ -0.25
SMAD1-214ENST00000514831 IGLV4-3A0A075B6K6 122 aa13.5□□□□□ -0.25
SMAD1-214ENST00000514831 TSPAN13O95857 204 aa13.5□□□□□ -0.25
SMAD1-214ENST00000514831 LINC01561Q8N1V8 128 aa13.5□□□□□ -0.25
SMAD1-214ENST00000514831 F8W036 122 aa13.48□□□□□ -0.25
SMAD1-214ENST00000514831 PPBPP02775 128 aa13.48□□□□□ -0.25
SMAD1-214ENST00000514831 S100A8P05109 93 aa13.48□□□□□ -0.25
SMAD1-214ENST00000514831 ADIRFQ15847 76 aa13.48□□□□□ -0.25
SMAD1-214ENST00000514831 TMEM141Q96I45 108 aa13.48□□□□□ -0.25
SMAD1-214ENST00000514831 A0A087X002 238 aa13.47□□□□□ -0.25
SMAD1-214ENST00000514831 A0A1B0GXF2 115 aa13.46□□□□□ -0.25
SMAD1-214ENST00000514831 RAB5AP20339 215 aa13.46□□□□□ -0.25
SMAD1-214ENST00000514831 MRPL54Q6P161 138 aaKnown RBP13.46□□□□□ -0.25
SMAD1-214ENST00000514831 C22orf24Q9Y442 160 aa13.46□□□□□ -0.25
SMAD1-214ENST00000514831 TEX43Q6ZNM6 134 aa13.45□□□□□ -0.26
SMAD1-214ENST00000514831 CTDSP1Q9GZU7 261 aa13.45□□□□□ -0.26
SMAD1-214ENST00000514831 NAT8Q9UHE5 227 aa13.45□□□□□ -0.26
SMAD1-214ENST00000514831 LBHQ53QV2 105 aaPredicted RBP13.44□□□□□ -0.26
SMAD1-214ENST00000514831 ORMDL3Q8N138 153 aa13.43□□□□□ -0.26
SMAD1-214ENST00000514831 LINC00469Q8N7U9 141 aa13.43□□□□□ -0.26
SMAD1-214ENST00000514831 PRSS2P07478 247 aa13.42□□□□□ -0.26
SMAD1-214ENST00000514831 RPL28P46779 137 aaKnown RBP13.42□□□□□ -0.26
SMAD1-214ENST00000514831 TYMSOSQ8TAI1 123 aa13.42□□□□□ -0.26
SMAD1-214ENST00000514831 C2orf88Q9BSF0 95 aa13.42□□□□□ -0.26
SMAD1-214ENST00000514831 TP73-AS1Q9UF72 201 aa13.42□□□□□ -0.26
SMAD1-214ENST00000514831 CRYGAP11844 174 aa13.41□□□□□ -0.26
SMAD1-214ENST00000514831 CKS1BP61024 79 aa13.41□□□□□ -0.26
SMAD1-214ENST00000514831 Q6ZN92 141 aa13.41□□□□□ -0.26
SMAD1-214ENST00000514831 AKAP14Q86UN6 197 aa13.41□□□□□ -0.26
SMAD1-214ENST00000514831 Q8IZM0 81 aa13.41□□□□□ -0.26
SMAD1-214ENST00000514831 XAGE1AQ9HD64 81 aa13.41□□□□□ -0.26
SMAD1-214ENST00000514831 BCE1O60756 84 aa13.4□□□□□ -0.26
SMAD1-214ENST00000514831 LINC00173Q6ZV60 143 aa13.4□□□□□ -0.26
SMAD1-214ENST00000514831 TOMM7Q9P0U1 55 aa13.4□□□□□ -0.26
SMAD1-214ENST00000514831 MRPL55Q7Z7F7 128 aaKnown RBP13.39□□□□□ -0.27
SMAD1-214ENST00000514831 PRELID3AQ96N28 172 aa13.39□□□□□ -0.27
SMAD1-214ENST00000514831 C6orf226Q5I0X4 101 aa13.38□□□□□ -0.27
SMAD1-214ENST00000514831 TMEM136Q6ZRR5 245 aa13.38□□□□□ -0.27
SMAD1-214ENST00000514831 AMELXQ99217 191 aa13.38□□□□□ -0.27
SMAD1-214ENST00000514831 KRTAP9-6A0A140TA67 174 aa13.37□□□□□ -0.27
SMAD1-214ENST00000514831 C9JQL5 133 aa13.37□□□□□ -0.27
SMAD1-214ENST00000514831 ZC2HC1BQ5TFG8 222 aa13.37□□□□□ -0.27
SMAD1-214ENST00000514831 FAT4Q6V0I7 4981 aa13.36□□□□□ -0.27
SMAD1-214ENST00000514831 PRSS47A8MTI9 375 aa13.36□□□□□ -0.27
SMAD1-214ENST00000514831 FAM19A3Q7Z5A8 133 aa13.36□□□□□ -0.27
SMAD1-214ENST00000514831 ALKBH7Q9BT30 221 aaPredicted RBP13.36□□□□□ -0.27
SMAD1-214ENST00000514831 CYSLTR1Q9Y271 337 aa13.36□□□□□ -0.27
SMAD1-214ENST00000514831 C2orf66Q6UXQ4 117 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms