RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 TEX48A0A1B0GUV7 120 aa5.76□□□□□ -1.49
CPNE4-211ENST00000514439 SMIM9A6NGZ8 99 aa5.76□□□□□ -1.49
CPNE4-211ENST00000514439 PSMB2P49721 201 aa5.76□□□□□ -1.49
CPNE4-211ENST00000514439 VPS25Q9BRG1 176 aa5.76□□□□□ -1.49
CPNE4-211ENST00000514439 F5H768 121 aa5.75□□□□□ -1.49
CPNE4-211ENST00000514439 G3V4G9 280 aa5.75□□□□□ -1.49
CPNE4-211ENST00000514439 TIMM17BO60830 172 aa5.75□□□□□ -1.49
CPNE4-211ENST00000514439 NPC2P61916 151 aa5.75□□□□□ -1.49
CPNE4-211ENST00000514439 Q9H8V8 135 aa5.75□□□□□ -1.49
CPNE4-211ENST00000514439 IGLV4-60A0A075B6I1 120 aa5.75□□□□□ -1.49
CPNE4-211ENST00000514439 TCL1BO95988 128 aa5.75□□□□□ -1.49
CPNE4-211ENST00000514439 DEFB135Q30KP9 77 aa5.75□□□□□ -1.49
CPNE4-211ENST00000514439 CHCHD5Q9BSY4 110 aa5.75□□□□□ -1.49
CPNE4-211ENST00000514439 ERG28Q9UKR5 140 aa5.75□□□□□ -1.49
CPNE4-211ENST00000514439 H7C2G1 150 aa5.74□□□□□ -1.49
CPNE4-211ENST00000514439 GYPEP15421 78 aa5.74□□□□□ -1.49
CPNE4-211ENST00000514439 ETDBQ3ZM63 59 aa5.74□□□□□ -1.49
CPNE4-211ENST00000514439 FAM222AQ5U5X8 452 aa5.74□□□□□ -1.49
CPNE4-211ENST00000514439 SH2D6Q7Z4S9 175 aa5.74□□□□□ -1.49
CPNE4-211ENST00000514439 DAND5Q8N907 189 aa5.74□□□□□ -1.49
CPNE4-211ENST00000514439 ATRQ13535 2644 aa5.74□□□□□ -1.49
CPNE4-211ENST00000514439 TRBV20-1A0A075B6N2 111 aa5.74□□□□□ -1.49
CPNE4-211ENST00000514439 SCGB1C2P0DMR2 95 aa5.74□□□□□ -1.49
CPNE4-211ENST00000514439 ZNF625Q96I27 306 aaPredicted RBP5.74□□□□□ -1.49
CPNE4-211ENST00000514439 IGKV3OR2-268A0A0C4DH90 116 aa5.73□□□□□ -1.49
CPNE4-211ENST00000514439 LYRM9A8MSI8 78 aa5.73□□□□□ -1.49
CPNE4-211ENST00000514439 APOC4P55056 127 aa5.73□□□□□ -1.49
CPNE4-211ENST00000514439 Q1RN00 199 aa5.73□□□□□ -1.49
CPNE4-211ENST00000514439 ATP6V0E2Q8NHE4 81 aa5.73□□□□□ -1.49
CPNE4-211ENST00000514439 DEFB4AO15263 64 aa5.73□□□□□ -1.49
CPNE4-211ENST00000514439 IFITM1P13164 125 aa5.73□□□□□ -1.49
CPNE4-211ENST00000514439 CIRBPQ14011 172 aaKnown RBP5.73□□□□□ -1.49
CPNE4-211ENST00000514439 PRO0255Q9UI72 69 aa5.73□□□□□ -1.49
CPNE4-211ENST00000514439 NBEAL2Q6ZNJ1 2754 aa5.72□□□□□ -1.49
CPNE4-211ENST00000514439 IGHV4-28A0A0C4DH34 117 aa5.72□□□□□ -1.49
CPNE4-211ENST00000514439 PRIMA1Q86XR5 153 aa5.72□□□□□ -1.49
CPNE4-211ENST00000514439 RNF183Q96D59 192 aa5.72□□□□□ -1.49
CPNE4-211ENST00000514439 TEP1Q99973 2627 aaKnown RBP5.72□□□□□ -1.49
CPNE4-211ENST00000514439 A0A0U1RRA0 63 aa5.71□□□□□ -1.49
CPNE4-211ENST00000514439 WFDC9Q8NEX5 89 aa5.71□□□□□ -1.49
CPNE4-211ENST00000514439 TRRAPQ9Y4A5 3859 aa5.71□□□□□ -1.5
CPNE4-211ENST00000514439 A0A096LPF7 62 aa5.71□□□□□ -1.5
CPNE4-211ENST00000514439 LINC00308Q8TCZ7 52 aa5.71□□□□□ -1.5
CPNE4-211ENST00000514439 TRBV30A0A0K0K1B3 111 aa5.7□□□□□ -1.5
CPNE4-211ENST00000514439 J3QL48 77 aa5.7□□□□□ -1.5
CPNE4-211ENST00000514439 PAX4O43316 350 aa5.7□□□□□ -1.5
CPNE4-211ENST00000514439 TRIAP1O43715 76 aa5.7□□□□□ -1.5
CPNE4-211ENST00000514439 HERV-K104P63124 156 aa5.7□□□□□ -1.5
CPNE4-211ENST00000514439 MEIG1Q5JSS6 88 aa5.7□□□□□ -1.5
CPNE4-211ENST00000514439 Q8NAQ8 132 aa5.7□□□□□ -1.5
CPNE4-211ENST00000514439 IGHV3OR16-9A0A0B4J2B5 98 aa5.7□□□□□ -1.5
CPNE4-211ENST00000514439 WIPF1O43516 503 aa5.7□□□□□ -1.5
CPNE4-211ENST00000514439 DAD1P61803 113 aa5.7□□□□□ -1.5
CPNE4-211ENST00000514439 COX7B2Q8TF08 81 aa5.7□□□□□ -1.5
CPNE4-211ENST00000514439 CELA1Q9UNI1 258 aa5.7□□□□□ -1.5
CPNE4-211ENST00000514439 ICOSQ9Y6W8 199 aa5.7□□□□□ -1.5
CPNE4-211ENST00000514439 IGHV4-30-4P0DP06 118 aa5.69□□□□□ -1.5
CPNE4-211ENST00000514439 SOSTDC1Q6X4U4 206 aa5.69□□□□□ -1.5
CPNE4-211ENST00000514439 F8P00451 2351 aa5.69□□□□□ -1.5
CPNE4-211ENST00000514439 LINC00959A0A1B0GUT2 108 aa5.69□□□□□ -1.5
CPNE4-211ENST00000514439 TMEM262E9PQX1 116 aa5.69□□□□□ -1.5
CPNE4-211ENST00000514439 J3QR89 54 aa5.69□□□□□ -1.5
CPNE4-211ENST00000514439 MIFP14174 115 aa5.69□□□□□ -1.5
CPNE4-211ENST00000514439 RPL13AP40429 203 aaKnown RBP5.69□□□□□ -1.5
CPNE4-211ENST00000514439 PCP4P48539 62 aa5.69□□□□□ -1.5
CPNE4-211ENST00000514439 TOMM7Q9P0U1 55 aa5.69□□□□□ -1.5
CPNE4-211ENST00000514439 A0A087WZ39 114 aa5.68□□□□□ -1.5
CPNE4-211ENST00000514439 A0A1B0GUV1 79 aa5.68□□□□□ -1.5
CPNE4-211ENST00000514439 C5orf38Q86SI9 138 aa5.68□□□□□ -1.5
CPNE4-211ENST00000514439 ATXN8Q156A1 80 aa5.68□□□□□ -1.5
CPNE4-211ENST00000514439 COPS9Q8WXC6 57 aa5.68□□□□□ -1.5
CPNE4-211ENST00000514439 C9JAW5 83 aa5.67□□□□□ -1.5
CPNE4-211ENST00000514439 SLC25A20O43772 301 aa5.67□□□□□ -1.5
CPNE4-211ENST00000514439 ATP5G1P05496 136 aa5.67□□□□□ -1.5
CPNE4-211ENST00000514439 FOXI1Q12951 378 aa5.67□□□□□ -1.5
CPNE4-211ENST00000514439 CLPSL2Q6UWE3 100 aa5.67□□□□□ -1.5
CPNE4-211ENST00000514439 TEN1Q86WV5 123 aa5.67□□□□□ -1.5
CPNE4-211ENST00000514439 TRAV26-1A0A087WT03 109 aa5.66□□□□□ -1.5
CPNE4-211ENST00000514439 C21orf62-AS1Q17RA5 79 aa5.66□□□□□ -1.5
CPNE4-211ENST00000514439 LINC01620Q4KN68 170 aa5.66□□□□□ -1.5
CPNE4-211ENST00000514439 COX6CP09669 75 aa5.66□□□□□ -1.5
CPNE4-211ENST00000514439 SPART-AS1P0CW21 52 aa5.66□□□□□ -1.5
CPNE4-211ENST00000514439 XCL1P47992 114 aa5.66□□□□□ -1.5
CPNE4-211ENST00000514439 SS18Q15532 418 aa5.66□□□□□ -1.5
CPNE4-211ENST00000514439 ANKRD29Q8N6D5 301 aa5.66□□□□□ -1.5
CPNE4-211ENST00000514439 HTN3P15516 51 aa5.65□□□□□ -1.5
CPNE4-211ENST00000514439 OXLD1Q5BKU9 147 aa5.65□□□□□ -1.5
CPNE4-211ENST00000514439 MIR7-3HGQ8N6C7 128 aa5.65□□□□□ -1.5
CPNE4-211ENST00000514439 M0QXV9 152 aa5.65□□□□□ -1.51
CPNE4-211ENST00000514439 Q8N3U1 123 aa5.65□□□□□ -1.51
CPNE4-211ENST00000514439 PPDPFLQ8WWR9 84 aa5.65□□□□□ -1.51
CPNE4-211ENST00000514439 CLEC2BQ92478 149 aa5.65□□□□□ -1.51
CPNE4-211ENST00000514439 CARD19Q96LW7 228 aa5.65□□□□□ -1.51
CPNE4-211ENST00000514439 PPDPFQ9H3Y8 114 aa5.65□□□□□ -1.51
CPNE4-211ENST00000514439 FLNBO75369 2602 aaKnown RBP5.65□□□□□ -1.51
CPNE4-211ENST00000514439 KRTAP24-1Q3LI83 254 aa5.64□□□□□ -1.51
CPNE4-211ENST00000514439 GAGE12HA6NDE8 117 aa5.64□□□□□ -1.51
CPNE4-211ENST00000514439 LST1O00453 97 aa5.64□□□□□ -1.51
CPNE4-211ENST00000514439 LINC00158P58513 81 aa5.64□□□□□ -1.51
CPNE4-211ENST00000514439 LINC00269Q8N2A0 174 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms