RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 FAM19A3Q7Z5A8 133 aa5.68□□□□□ -1.5
CCL28-204ENST00000514421 PCP2Q8IVA1 136 aa5.68□□□□□ -1.5
CCL28-204ENST00000514421 KRTAP4-12Q9BQ66 201 aa5.68□□□□□ -1.5
CCL28-204ENST00000514421 TRAV8-6A0A0B4J262 113 aa5.67□□□□□ -1.5
CCL28-204ENST00000514421 H7C423 109 aa5.67□□□□□ -1.5
CCL28-204ENST00000514421 BVES-AS1Q5T3Y7 98 aa5.67□□□□□ -1.5
CCL28-204ENST00000514421 LELP1Q5T871 98 aa5.67□□□□□ -1.5
CCL28-204ENST00000514421 NTM-AS1Q6ZSK4 140 aa5.67□□□□□ -1.5
CCL28-204ENST00000514421 LINC00336Q6ZUF6 198 aa5.67□□□□□ -1.5
CCL28-204ENST00000514421 TP73-AS1Q9UF72 201 aa5.67□□□□□ -1.5
CCL28-204ENST00000514421 K7EP13 123 aa5.66□□□□□ -1.5
CCL28-204ENST00000514421 RTL8CO15255 209 aa5.66□□□□□ -1.5
CCL28-204ENST00000514421 NMUP48645 174 aa5.66□□□□□ -1.5
CCL28-204ENST00000514421 HSD52Q0P140 79 aa5.66□□□□□ -1.5
CCL28-204ENST00000514421 MPV17L2Q567V2 206 aa5.66□□□□□ -1.5
CCL28-204ENST00000514421 C6orf223Q8N319 242 aa5.66□□□□□ -1.5
CCL28-204ENST00000514421 VCX2Q9H322 139 aa5.66□□□□□ -1.5
CCL28-204ENST00000514421 TRBV25-1A0A075B6N4 114 aa5.65□□□□□ -1.5
CCL28-204ENST00000514421 IGLV5-45A0A087WSX0 123 aa5.65□□□□□ -1.5
CCL28-204ENST00000514421 IGHV3-38A0A0C4DH36 116 aa5.65□□□□□ -1.5
CCL28-204ENST00000514421 TINCRA0A1B0GVN0 87 aa5.65□□□□□ -1.5
CCL28-204ENST00000514421 DNAH10OSP0CZ25 163 aa5.65□□□□□ -1.5
CCL28-204ENST00000514421 SEC11AP67812 179 aa5.65□□□□□ -1.5
CCL28-204ENST00000514421 SMAGPQ0VAQ4 97 aa5.65□□□□□ -1.5
CCL28-204ENST00000514421 TAL2Q16559 108 aa5.65□□□□□ -1.5
CCL28-204ENST00000514421 TMEM97Q5BJF2 176 aa5.65□□□□□ -1.5
CCL28-204ENST00000514421 WFDC10BQ8IUB3 73 aa5.65□□□□□ -1.5
CCL28-204ENST00000514421 OPRPNQ99935 248 aaPredicted RBP5.65□□□□□ -1.5
CCL28-204ENST00000514421 MYMXA0A1B0GTQ4 84 aa5.64□□□□□ -1.51
CCL28-204ENST00000514421 A0A1B0GV90 55 aa5.64□□□□□ -1.51
CCL28-204ENST00000514421 TMEM223A0PJW6 202 aa5.64□□□□□ -1.51
CCL28-204ENST00000514421 ZNF22P17026 224 aaPredicted RBP5.64□□□□□ -1.51
CCL28-204ENST00000514421 HINT1P49773 126 aaPredicted RBP5.64□□□□□ -1.51
CCL28-204ENST00000514421 HERVK_113P61574 105 aa5.64□□□□□ -1.51
CCL28-204ENST00000514421 C10orf126Q8N4M7 172 aa5.64□□□□□ -1.51
CCL28-204ENST00000514421 MAPKAPK5-AS1Q8N8E1 139 aa5.64□□□□□ -1.51
CCL28-204ENST00000514421 DEFB104AQ8WTQ1 72 aa5.64□□□□□ -1.51
CCL28-204ENST00000514421 CHAC1Q9BUX1 264 aa5.64□□□□□ -1.51
CCL28-204ENST00000514421 TM2D2Q9BX73 214 aa5.64□□□□□ -1.51
CCL28-204ENST00000514421 KRTAP1-5Q9BYS1 174 aa5.64□□□□□ -1.51
CCL28-204ENST00000514421 FAT2Q9NYQ8 4349 aa5.64□□□□□ -1.51
CCL28-204ENST00000514421 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.63□□□□□ -1.51
CCL28-204ENST00000514421 IGKV2-29A2NJV5 120 aaPredicted RBP5.63□□□□□ -1.51
CCL28-204ENST00000514421 ZNF25P17030 456 aaPredicted RBP5.63□□□□□ -1.51
CCL28-204ENST00000514421 UBE2D1P51668 147 aa5.63□□□□□ -1.51
CCL28-204ENST00000514421 LINC01556Q5JQF7 62 aa5.63□□□□□ -1.51
CCL28-204ENST00000514421 Q6ZUT4 128 aa5.63□□□□□ -1.51
CCL28-204ENST00000514421 KRTAP9-9Q9BYP9 154 aa5.63□□□□□ -1.51
CCL28-204ENST00000514421 KRTAP9-4Q9BYQ2 154 aa5.63□□□□□ -1.51
CCL28-204ENST00000514421 TTTY13Q9BZ97 58 aa5.63□□□□□ -1.51
CCL28-204ENST00000514421 EPPK1P58107 5090 aaKnown RBP5.62□□□□□ -1.51
CCL28-204ENST00000514421 TRBV6-8A0A0A6YYG3 113 aa5.62□□□□□ -1.51
CCL28-204ENST00000514421 KRTAP4-8A0A0G2JLE6 195 aa5.62□□□□□ -1.51
CCL28-204ENST00000514421 A0A0J9YXV3 536 aa5.62□□□□□ -1.51
CCL28-204ENST00000514421 LEPROTO15243 131 aa5.62□□□□□ -1.51
CCL28-204ENST00000514421 ORAOV1Q8WV07 137 aa5.62□□□□□ -1.51
CCL28-204ENST00000514421 TMEM243Q9BU79 118 aa5.62□□□□□ -1.51
CCL28-204ENST00000514421 CDC42SE2Q9NRR3 84 aa5.62□□□□□ -1.51
CCL28-204ENST00000514421 FRAS1Q86XX4 4008 aa5.61□□□□□ -1.51
CCL28-204ENST00000514421 IBA57-AS1B1ANH7 110 aa5.61□□□□□ -1.51
CCL28-204ENST00000514421 IGHV3-30P01768 117 aa5.61□□□□□ -1.51
CCL28-204ENST00000514421 IGHV3-33P01772 117 aa5.61□□□□□ -1.51
CCL28-204ENST00000514421 IGHV3-30-3P0DP02 117 aa5.61□□□□□ -1.51
CCL28-204ENST00000514421 IGHV3-30-5P0DP03 117 aa5.61□□□□□ -1.51
CCL28-204ENST00000514421 BATFQ16520 125 aa5.61□□□□□ -1.51
CCL28-204ENST00000514421 TMEM170BQ5T4T1 132 aa5.61□□□□□ -1.51
CCL28-204ENST00000514421 OR5A1Q8NGJ0 315 aa5.61□□□□□ -1.51
CCL28-204ENST00000514421 PLEKHB2Q96CS7 222 aa5.61□□□□□ -1.51
CCL28-204ENST00000514421 COX11Q9Y6N1 276 aa5.61□□□□□ -1.51
CCL28-204ENST00000514421 DNAH11Q96DT5 4516 aa5.6□□□□□ -1.51
CCL28-204ENST00000514421 TMEM262E9PQX1 116 aa5.6□□□□□ -1.51
CCL28-204ENST00000514421 J3QQQ9 107 aa5.6□□□□□ -1.51
CCL28-204ENST00000514421 TAX1BP3O14907 124 aa5.6□□□□□ -1.51
CCL28-204ENST00000514421 TSPEAR-AS2P59090 65 aa5.6□□□□□ -1.51
CCL28-204ENST00000514421 TNP2Q05952 138 aa5.6□□□□□ -1.51
CCL28-204ENST00000514421 SPANXB1Q9NS25 103 aaPredicted RBP5.6□□□□□ -1.51
CCL28-204ENST00000514421 BIRC6Q9NR09 4857 aa5.6□□□□□ -1.51
CCL28-204ENST00000514421 IGHV1-58A0A0C4DH39 117 aa5.59□□□□□ -1.51
CCL28-204ENST00000514421 IGLV5-39A0A0G2JS06 123 aa5.59□□□□□ -1.51
CCL28-204ENST00000514421 A0A1B0GUV1 79 aa5.59□□□□□ -1.51
CCL28-204ENST00000514421 A0A1B0GVY2 172 aa5.59□□□□□ -1.51
CCL28-204ENST00000514421 A0A1B0GWB2 263 aa5.59□□□□□ -1.51
CCL28-204ENST00000514421 A6NDN8 102 aa5.59□□□□□ -1.51
CCL28-204ENST00000514421 ZNF815PA8K554 130 aa5.59□□□□□ -1.51
CCL28-204ENST00000514421 HERVK_113P63121 156 aa5.59□□□□□ -1.51
CCL28-204ENST00000514421 LINC00242Q5T6M2 205 aa5.59□□□□□ -1.51
CCL28-204ENST00000514421 DGAT2L7PQ6IED9 249 aa5.59□□□□□ -1.51
CCL28-204ENST00000514421 CEND1Q8N111 149 aa5.59□□□□□ -1.51
CCL28-204ENST00000514421 DYNC1H1Q14204 4646 aaKnown RBP5.59□□□□□ -1.51
CCL28-204ENST00000514421 TRAV8-3A0A0A6YYJ7 113 aa5.58□□□□□ -1.52
CCL28-204ENST00000514421 H3BRM9 83 aa5.58□□□□□ -1.52
CCL28-204ENST00000514421 Q6ZRN7 208 aaPredicted RBP5.58□□□□□ -1.52
CCL28-204ENST00000514421 TMEM101Q96IK0 257 aa5.58□□□□□ -1.52
CCL28-204ENST00000514421 CHCHD5Q9BSY4 110 aa5.58□□□□□ -1.52
CCL28-204ENST00000514421 UBE2L6O14933 153 aa5.57□□□□□ -1.52
CCL28-204ENST00000514421 LGALS3P17931 250 aaKnown RBP5.57□□□□□ -1.52
CCL28-204ENST00000514421 FXYD2P54710 66 aa5.57□□□□□ -1.52
CCL28-204ENST00000514421 RNASE13Q5GAN3 156 aaKnown RBP5.57□□□□□ -1.52
CCL28-204ENST00000514421 GEMIN7Q9H840 131 aaKnown RBP5.57□□□□□ -1.52
CCL28-204ENST00000514421 CCL25O15444 150 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms