RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 MRPL35Q9NZE8 188 aaKnown RBP1.74□□□□□ -2.13
CHD1-211ENST00000514344 C6orf48Q9UBA6 75 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 NDUFA1O15239 70 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 CXorf1O96002 111 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 TMEM167BQ9NRX6 74 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 HSPB11Q9Y547 144 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 C9orf118A6NHY6 69 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 FAM74A7A6NL05 159 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 C1orf196B1AJZ1 125 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 H3BS24 57 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 SCO1O75880 301 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 MPC2O95563 127 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 CTRLP40313 264 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 CTAG1AP78358 180 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 LYZL1Q6UWQ5 148 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 GATD1Q8NB37 220 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 Q8NBF4 154 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 MRAP2Q96G30 205 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 ACTR3CQ9C0K3 210 aaPredicted RBP1.74□□□□□ -2.13
CHD1-211ENST00000514344 MED28Q9H204 178 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 BATF3Q9NR55 127 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 NAP1L6A6NFF2 107 aa1.73□□□□□ -2.13
CHD1-211ENST00000514344 TLX1NBP0CAT3 122 aa1.73□□□□□ -2.13
CHD1-211ENST00000514344 RAB5BP61020 215 aa1.73□□□□□ -2.13
CHD1-211ENST00000514344 IL15RAQ13261 267 aa1.73□□□□□ -2.13
CHD1-211ENST00000514344 ZNF726P1Q15940 193 aa1.73□□□□□ -2.13
CHD1-211ENST00000514344 ZFP30Q9Y2G7 519 aa1.73□□□□□ -2.13
CHD1-211ENST00000514344 A0A1W2PRE2 83 aa1.73□□□□□ -2.13
CHD1-211ENST00000514344 MAP1LC3B2A6NCE7 125 aa1.73□□□□□ -2.13
CHD1-211ENST00000514344 SMKR1H3BMG3 65 aa1.73□□□□□ -2.13
CHD1-211ENST00000514344 NCR2O95944 276 aa1.73□□□□□ -2.13
CHD1-211ENST00000514344 MT2AP02795 61 aa1.73□□□□□ -2.13
CHD1-211ENST00000514344 ZNF25P17030 456 aaPredicted RBP1.73□□□□□ -2.13
CHD1-211ENST00000514344 TMEM241Q24JQ0 296 aa1.73□□□□□ -2.13
CHD1-211ENST00000514344 RPL7L1Q6DKI1 246 aaKnown RBP1.73□□□□□ -2.13
CHD1-211ENST00000514344 Q6ZUT4 128 aa1.73□□□□□ -2.13
CHD1-211ENST00000514344 MRPL55Q7Z7F7 128 aaKnown RBP1.73□□□□□ -2.13
CHD1-211ENST00000514344 ENKURQ8TC29 256 aa1.73□□□□□ -2.13
CHD1-211ENST00000514344 HIST1H2BAQ96A08 127 aa1.73□□□□□ -2.13
CHD1-211ENST00000514344 HIGD2AQ9BW72 106 aa1.73□□□□□ -2.13
CHD1-211ENST00000514344 MAP1LC3BQ9GZQ8 125 aa1.73□□□□□ -2.13
CHD1-211ENST00000514344 NDUFC2-KCTD14E9PQ53 114 aa1.72□□□□□ -2.13
CHD1-211ENST00000514344 G3V3Q6 166 aa1.72□□□□□ -2.13
CHD1-211ENST00000514344 SNAI2O43623 268 aa1.72□□□□□ -2.13
CHD1-211ENST00000514344 IFNA1P01562 189 aa1.72□□□□□ -2.13
CHD1-211ENST00000514344 MT1FP04733 61 aa1.72□□□□□ -2.13
CHD1-211ENST00000514344 KRTAP10-10P60014 251 aa1.72□□□□□ -2.13
CHD1-211ENST00000514344 AKR1C8PQ5T2L2 129 aa1.72□□□□□ -2.13
CHD1-211ENST00000514344 SFT2D1Q8WV19 159 aa1.72□□□□□ -2.13
CHD1-211ENST00000514344 CDC42SE2Q9NRR3 84 aa1.72□□□□□ -2.13
CHD1-211ENST00000514344 FXYD6-FXYD2A0A087WZ82 144 aa1.72□□□□□ -2.13
CHD1-211ENST00000514344 C7orf77A4D0Y5 90 aa1.72□□□□□ -2.13
CHD1-211ENST00000514344 SPINK1P00995 79 aa1.72□□□□□ -2.13
CHD1-211ENST00000514344 LTAP01374 205 aa1.72□□□□□ -2.13
CHD1-211ENST00000514344 FCER1GP30273 86 aa1.72□□□□□ -2.13
CHD1-211ENST00000514344 RPL39P62891 51 aaKnown RBP1.72□□□□□ -2.13
CHD1-211ENST00000514344 RPL32P62910 135 aaKnown RBP1.72□□□□□ -2.13
CHD1-211ENST00000514344 LBHQ53QV2 105 aaPredicted RBP1.72□□□□□ -2.13
CHD1-211ENST00000514344 TMUB2Q71RG4 321 aa1.72□□□□□ -2.13
CHD1-211ENST00000514344 FMC1Q96HJ9 113 aa1.72□□□□□ -2.13
CHD1-211ENST00000514344 RAB19A4D1S5 217 aa1.71□□□□□ -2.14
CHD1-211ENST00000514344 H7C423 109 aa1.71□□□□□ -2.14
CHD1-211ENST00000514344 TRGC1P0CF51 173 aa1.71□□□□□ -2.14
CHD1-211ENST00000514344 LGALS3P17931 250 aaKnown RBP1.71□□□□□ -2.14
CHD1-211ENST00000514344 RPL35P42766 123 aaKnown RBP1.71□□□□□ -2.14
CHD1-211ENST00000514344 CEBPGP53567 150 aa1.71□□□□□ -2.14
CHD1-211ENST00000514344 Q5BKY6 102 aa1.71□□□□□ -2.14
CHD1-211ENST00000514344 KRTAP13-1Q8IUC0 172 aa1.71□□□□□ -2.14
CHD1-211ENST00000514344 Q8N377 158 aa1.71□□□□□ -2.14
CHD1-211ENST00000514344 OR10D4PQ8NGN7 298 aa1.71□□□□□ -2.14
CHD1-211ENST00000514344 PACRGQ96M98 296 aaPredicted RBP1.71□□□□□ -2.14
CHD1-211ENST00000514344 TIMM17AQ99595 171 aa1.71□□□□□ -2.14
CHD1-211ENST00000514344 ZC2HC1BQ5TFG8 222 aa1.71□□□□□ -2.14
CHD1-211ENST00000514344 FAM19A2Q8N3H0 131 aa1.71□□□□□ -2.14
CHD1-211ENST00000514344 FAM213BQ8TBF2 198 aa1.71□□□□□ -2.14
CHD1-211ENST00000514344 PLEKHB2Q96CS7 222 aa1.71□□□□□ -2.14
CHD1-211ENST00000514344 LINC00167Q96N53 147 aa1.71□□□□□ -2.14
CHD1-211ENST00000514344 CTXND1A0A1B0GTU2 59 aa1.71□□□□□ -2.14
CHD1-211ENST00000514344 KRTAP2-3P0C7H8 128 aa1.71□□□□□ -2.14
CHD1-211ENST00000514344 PET100P0DJ07 73 aa1.71□□□□□ -2.14
CHD1-211ENST00000514344 CENPWQ5EE01 88 aa1.71□□□□□ -2.14
CHD1-211ENST00000514344 FAM19A1Q7Z5A9 133 aa1.71□□□□□ -2.14
CHD1-211ENST00000514344 KRTAP2-4Q9BYR9 128 aa1.71□□□□□ -2.14
CHD1-211ENST00000514344 IGLV9-49A0A0B4J1Y8 123 aa1.7□□□□□ -2.14
CHD1-211ENST00000514344 IFITM10A6NMD0 228 aa1.7□□□□□ -2.14
CHD1-211ENST00000514344 I3L3M4 83 aa1.7□□□□□ -2.14
CHD1-211ENST00000514344 PNRC1Q12796 327 aaPredicted RBP1.7□□□□□ -2.14
CHD1-211ENST00000514344 SMIM15Q7Z3B0 74 aa1.7□□□□□ -2.14
CHD1-211ENST00000514344 GNG13Q9P2W3 67 aa1.7□□□□□ -2.14
CHD1-211ENST00000514344 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
CHD1-211ENST00000514344 ZNF727A8MUV8 499 aa1.7□□□□□ -2.14
CHD1-211ENST00000514344 TMEM238C9JI98 176 aa1.7□□□□□ -2.14
CHD1-211ENST00000514344 PFDN1O60925 122 aa1.7□□□□□ -2.14
CHD1-211ENST00000514344 CKS1BP61024 79 aa1.7□□□□□ -2.14
CHD1-211ENST00000514344 COX8CQ7Z4L0 72 aa1.7□□□□□ -2.14
CHD1-211ENST00000514344 AMN1Q8IY45 258 aa1.7□□□□□ -2.14
CHD1-211ENST00000514344 ST20Q9HBF5 79 aa1.7□□□□□ -2.14
CHD1-211ENST00000514344 TNFSF18Q9UNG2 199 aa1.7□□□□□ -2.14
CHD1-211ENST00000514344 TRBV20OR9-2A0A075B6H5 130 aa1.69□□□□□ -2.14
CHD1-211ENST00000514344 MBP02144 154 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms