RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 SPATA12Q7Z6I5 190 aa6.47□□□□□ -1.37
TOPBP1-209ENST00000513818 TOMM6Q96B49 74 aa6.47□□□□□ -1.37
TOPBP1-209ENST00000513818 CSDC2Q9Y534 153 aaKnown RBP6.47□□□□□ -1.37
TOPBP1-209ENST00000513818 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.46□□□□□ -1.38
TOPBP1-209ENST00000513818 TRAV8-4A0A0B4J246 113 aa6.46□□□□□ -1.38
TOPBP1-209ENST00000513818 K7EMI3 77 aa6.46□□□□□ -1.38
TOPBP1-209ENST00000513818 LINC00614P0C842 121 aa6.46□□□□□ -1.38
TOPBP1-209ENST00000513818 LINC00310P59036 64 aa6.46□□□□□ -1.38
TOPBP1-209ENST00000513818 MRPS36P82909 103 aaKnown RBP6.46□□□□□ -1.38
TOPBP1-209ENST00000513818 SMAGPQ0VAQ4 97 aa6.46□□□□□ -1.38
TOPBP1-209ENST00000513818 LINC00173Q6ZV60 143 aa6.46□□□□□ -1.38
TOPBP1-209ENST00000513818 BAGE3Q86Y29 109 aa6.46□□□□□ -1.38
TOPBP1-209ENST00000513818 IGIPA6NJ69 53 aa6.45□□□□□ -1.38
TOPBP1-209ENST00000513818 SERF1AO75920 110 aa6.45□□□□□ -1.38
TOPBP1-209ENST00000513818 FOXI1Q12951 378 aa6.45□□□□□ -1.38
TOPBP1-209ENST00000513818 Q8N814 137 aa6.45□□□□□ -1.38
TOPBP1-209ENST00000513818 TMEM141Q96I45 108 aa6.45□□□□□ -1.38
TOPBP1-209ENST00000513818 SCGB3A1Q96QR1 104 aa6.45□□□□□ -1.38
TOPBP1-209ENST00000513818 PYGO1Q9Y3Y4 419 aa6.45□□□□□ -1.38
TOPBP1-209ENST00000513818 COX11Q9Y6N1 276 aa6.45□□□□□ -1.38
TOPBP1-209ENST00000513818 KIAA1109Q2LD37 5005 aa6.44□□□□□ -1.38
TOPBP1-209ENST00000513818 HBDP02042 147 aa6.44□□□□□ -1.38
TOPBP1-209ENST00000513818 SS18Q15532 418 aa6.44□□□□□ -1.38
TOPBP1-209ENST00000513818 HIGD2BQ4VC39 106 aa6.44□□□□□ -1.38
TOPBP1-209ENST00000513818 Q6ZN92 141 aa6.44□□□□□ -1.38
TOPBP1-209ENST00000513818 TEX43Q6ZNM6 134 aa6.44□□□□□ -1.38
TOPBP1-209ENST00000513818 FAM19A2Q8N3H0 131 aa6.44□□□□□ -1.38
TOPBP1-209ENST00000513818 HSPG2P98160 4391 aa6.44□□□□□ -1.38
TOPBP1-209ENST00000513818 NUPR1O60356 82 aa6.43□□□□□ -1.38
TOPBP1-209ENST00000513818 HIST1H2BKO60814 126 aa6.43□□□□□ -1.38
TOPBP1-209ENST00000513818 HSBP1O75506 76 aa6.43□□□□□ -1.38
TOPBP1-209ENST00000513818 HIST1H2BJP06899 126 aa6.43□□□□□ -1.38
TOPBP1-209ENST00000513818 HIST1H2BOP23527 126 aa6.43□□□□□ -1.38
TOPBP1-209ENST00000513818 HIST1H2BBP33778 126 aa6.43□□□□□ -1.38
TOPBP1-209ENST00000513818 HIST1H2BDP58876 126 aa6.43□□□□□ -1.38
TOPBP1-209ENST00000513818 RAB5BP61020 215 aa6.43□□□□□ -1.38
TOPBP1-209ENST00000513818 HIST1H2BCP62807 126 aa6.43□□□□□ -1.38
TOPBP1-209ENST00000513818 HIST2H2BEQ16778 126 aa6.43□□□□□ -1.38
TOPBP1-209ENST00000513818 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.43□□□□□ -1.38
TOPBP1-209ENST00000513818 C5orf38Q86SI9 138 aa6.43□□□□□ -1.38
TOPBP1-209ENST00000513818 C15orf56Q8N910 161 aa6.43□□□□□ -1.38
TOPBP1-209ENST00000513818 HIST1H2BHQ93079 126 aa6.43□□□□□ -1.38
TOPBP1-209ENST00000513818 TIMM17AQ99595 171 aa6.43□□□□□ -1.38
TOPBP1-209ENST00000513818 HIST1H2BNQ99877 126 aa6.43□□□□□ -1.38
TOPBP1-209ENST00000513818 HIST1H2BMQ99879 126 aa6.43□□□□□ -1.38
TOPBP1-209ENST00000513818 RYR1P21817 5038 aa6.42□□□□□ -1.38
TOPBP1-209ENST00000513818 IGLV5-52A0A0A0MRZ9 124 aa6.42□□□□□ -1.38
TOPBP1-209ENST00000513818 C16orf90A8MZG2 172 aa6.42□□□□□ -1.38
TOPBP1-209ENST00000513818 PRSS1P07477 247 aa6.42□□□□□ -1.38
TOPBP1-209ENST00000513818 UBE2D1P51668 147 aa6.42□□□□□ -1.38
TOPBP1-209ENST00000513818 LINC01620Q4KN68 170 aa6.42□□□□□ -1.38
TOPBP1-209ENST00000513818 ERASQ7Z444 233 aa6.42□□□□□ -1.38
TOPBP1-209ENST00000513818 CHCHD1Q96BP2 118 aaKnown RBP6.42□□□□□ -1.38
TOPBP1-209ENST00000513818 LINC00526Q96FQ7 95 aa6.42□□□□□ -1.38
TOPBP1-209ENST00000513818 AMELXQ99217 191 aa6.42□□□□□ -1.38
TOPBP1-209ENST00000513818 C2orf88Q9BSF0 95 aa6.42□□□□□ -1.38
TOPBP1-209ENST00000513818 VCX2Q9H322 139 aa6.42□□□□□ -1.38
TOPBP1-209ENST00000513818 C1orf196B1AJZ1 125 aa6.41□□□□□ -1.38
TOPBP1-209ENST00000513818 G0S2P27469 103 aa6.41□□□□□ -1.38
TOPBP1-209ENST00000513818 COX6A2Q02221 97 aa6.41□□□□□ -1.38
TOPBP1-209ENST00000513818 RNF151Q2KHN1 245 aa6.41□□□□□ -1.38
TOPBP1-209ENST00000513818 LBHQ53QV2 105 aaPredicted RBP6.41□□□□□ -1.38
TOPBP1-209ENST00000513818 PDZD11Q5EBL8 140 aa6.41□□□□□ -1.38
TOPBP1-209ENST00000513818 LINC00242Q5T6M2 205 aa6.41□□□□□ -1.38
TOPBP1-209ENST00000513818 CD164L2Q6UWJ8 174 aa6.41□□□□□ -1.38
TOPBP1-209ENST00000513818 NTN5Q8WTR8 489 aaPredicted RBP6.41□□□□□ -1.38
TOPBP1-209ENST00000513818 A0A0J9YXV3 536 aa6.4□□□□□ -1.38
TOPBP1-209ENST00000513818 hDV102S1A0JD36 115 aa6.4□□□□□ -1.38
TOPBP1-209ENST00000513818 COX7A2LO14548 114 aa6.4□□□□□ -1.38
TOPBP1-209ENST00000513818 PLA2G1BP04054 148 aaKnown RBP6.4□□□□□ -1.38
TOPBP1-209ENST00000513818 NDUFA6P56556 154 aa6.4□□□□□ -1.38
TOPBP1-209ENST00000513818 FAT1Q14517 4588 aa6.4□□□□□ -1.39
TOPBP1-209ENST00000513818 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.39□□□□□ -1.39
TOPBP1-209ENST00000513818 PRYO14603 147 aa6.39□□□□□ -1.39
TOPBP1-209ENST00000513818 HERC2O95714 4834 aa6.38□□□□□ -1.39
TOPBP1-209ENST00000513818 IGHV3OR16-9A0A0B4J2B5 98 aa6.38□□□□□ -1.39
TOPBP1-209ENST00000513818 SLPIP03973 132 aa6.38□□□□□ -1.39
TOPBP1-209ENST00000513818 NPSP0C0P6 89 aa6.38□□□□□ -1.39
TOPBP1-209ENST00000513818 FABP4P15090 132 aa6.38□□□□□ -1.39
TOPBP1-209ENST00000513818 KRTAP10-1P60331 282 aa6.38□□□□□ -1.39
TOPBP1-209ENST00000513818 PMVKQ15126 192 aa6.38□□□□□ -1.39
TOPBP1-209ENST00000513818 C14orf177Q52M58 125 aa6.38□□□□□ -1.39
TOPBP1-209ENST00000513818 PAPPA-AS1Q5QFB9 102 aa6.38□□□□□ -1.39
TOPBP1-209ENST00000513818 CST9LQ9H4G1 147 aa6.38□□□□□ -1.39
TOPBP1-209ENST00000513818 GVQW2A0A096LPI5 108 aaPredicted RBP6.37□□□□□ -1.39
TOPBP1-209ENST00000513818 IGHV1-58A0A0C4DH39 117 aa6.37□□□□□ -1.39
TOPBP1-209ENST00000513818 LINC01549A6NIU2 74 aa6.37□□□□□ -1.39
TOPBP1-209ENST00000513818 ATP5LO75964 103 aa6.37□□□□□ -1.39
TOPBP1-209ENST00000513818 HAMPP81172 84 aa6.37□□□□□ -1.39
TOPBP1-209ENST00000513818 ORAOV1Q8WV07 137 aa6.37□□□□□ -1.39
TOPBP1-209ENST00000513818 IFI27L1Q96BM0 104 aa6.37□□□□□ -1.39
TOPBP1-209ENST00000513818 IGLV4-69A0A075B6H9 119 aa6.36□□□□□ -1.39
TOPBP1-209ENST00000513818 LEPROTL1O95214 131 aa6.36□□□□□ -1.39
TOPBP1-209ENST00000513818 SPAG11BQ08648 103 aa6.36□□□□□ -1.39
TOPBP1-209ENST00000513818 LINC00469Q8N7U9 141 aa6.36□□□□□ -1.39
TOPBP1-209ENST00000513818 CHAC1Q9BUX1 264 aa6.36□□□□□ -1.39
TOPBP1-209ENST00000513818 GEMIN7Q9H840 131 aaKnown RBP6.36□□□□□ -1.39
TOPBP1-209ENST00000513818 CDKN2A-AS1Q9UH64 79 aa6.36□□□□□ -1.39
TOPBP1-209ENST00000513818 A0A087WZ39 114 aa6.35□□□□□ -1.39
TOPBP1-209ENST00000513818 A0A0A0MQY5 61 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms