RNA–Protein interactions for RNA: ENST00000513064.1

CHD1-210, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-210ENST00000513064 A0A1B0GW64 132 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 NUPR2A6NF83 97 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 NAP1L6A6NFF2 107 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 SNRPGP15A8MWD9 76 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 IBA57-AS1B1ANH7 110 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 I3L2K1 104 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 HMGB3O15347 200 aaKnown RBP1.12□□□□□ -2.23
CHD1-210ENST00000513064 SSSCA1O60232 199 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 SIX6O95475 246 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 SFT2D2O95562 160 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 OR4E1P0C645 316 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 METTL15P1P0C7V9 234 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 ZNF705BP0CI00 300 aaPredicted RBP1.12□□□□□ -2.23
CHD1-210ENST00000513064 DEFB130BP0DP73 79 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 DEFB130AP0DP74 79 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 SLC25A4P12235 298 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 DEFB1P60022 68 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 PSG9Q00887 426 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 HIST1H1AQ02539 215 aaPredicted RBP1.12□□□□□ -2.23
CHD1-210ENST00000513064 SURF2Q15527 256 aaPredicted RBP1.12□□□□□ -2.23
CHD1-210ENST00000513064 RRN3P1Q2M238 152 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 TMEM128Q5BJH2 165 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 LCN15Q6UWW0 184 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 C7orf65Q6ZTY9 151 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 MIR17HGQ75NE6 70 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 C10orf126Q8N4M7 172 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 FAM24BQ8N5W8 94 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 SMIM4Q8WVI0 70 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 CIB3Q96Q77 187 aaPredicted RBP1.12□□□□□ -2.23
CHD1-210ENST00000513064 SCGB3A1Q96QR1 104 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 MRPL32Q9BYC8 188 aaKnown RBP1.12□□□□□ -2.23
CHD1-210ENST00000513064 TMEM14BQ9NUH8 114 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 CACFD1Q9UGQ2 172 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 U3KQ87 197 aa1.12□□□□□ -2.23
CHD1-210ENST00000513064 HUWE1Q7Z6Z7 4374 aaKnown RBP1.12□□□□□ -2.23
CHD1-210ENST00000513064 ANK2Q01484 3957 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 PRKDCP78527 4128 aaKnown RBP1.11□□□□□ -2.23
CHD1-210ENST00000513064 COL7A1Q02388 2944 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 TRAV12-2A0A075B6T6 113 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 DEFB131BA0A096LNP1 70 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 TRAV10A0A0B4J240 114 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 A0A0J9YY99 117 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 LCE6AA0A183 80 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 DUXBA0A1W2PPF3 345 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 C9orf170A2RU37 121 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 FAM24AA6NFZ4 105 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 C17orf112F2Z3M2 114 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 M0R2Z0 102 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 LYRM1O43325 122 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 HYPMO75409 117 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 CST7O76096 145 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 CFDP00746 253 aaPredicted RBP1.11□□□□□ -2.23
CHD1-210ENST00000513064 IGLC1P0CG04 106 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 SPART-AS1P0CW21 52 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 MIFP14174 115 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 FGF7P21781 194 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 RNASE4P34096 147 aaKnown RBP1.11□□□□□ -2.23
CHD1-210ENST00000513064 KRTAP10-4P60372 401 aaPredicted RBP1.11□□□□□ -2.23
CHD1-210ENST00000513064 YPEL3P61236 119 aaPredicted RBP1.11□□□□□ -2.23
CHD1-210ENST00000513064 LINC01554Q52M75 96 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 C10orf113Q5VZT2 155 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 MIC13Q5XKP0 118 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 Q6Q795 121 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 CYP2G1PQ6ZSU1 146 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 GOLT1AQ6ZVE7 132 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 LCA10Q71F78 164 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 LINC00305Q7Z4B0 112 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 STX12Q86Y82 276 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 OR5A1Q8NGJ0 315 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 C2orf50Q96LR7 162 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 HYLS1Q96M11 299 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 TRGV9Q99603 122 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 SLC25A21Q9BQT8 299 aaPredicted RBP1.11□□□□□ -2.23
CHD1-210ENST00000513064 SMIM3Q9BZL3 60 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 SLC35B3Q9H1N7 401 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 NPVFQ9HCQ7 196 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 MRPL36Q9P0J6 103 aaKnown RBP1.11□□□□□ -2.23
CHD1-210ENST00000513064 KLK9Q9UKQ9 250 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 DNAH3Q8TD57 4116 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 NBEAL2Q6ZNJ1 2754 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 TENM3Q9P273 2699 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 DNHD1Q96M86 4753 aa1.11□□□□□ -2.23
CHD1-210ENST00000513064 TRAV2A0A0B4J234 112 aa1.1□□□□□ -2.23
CHD1-210ENST00000513064 TRAV5A0A0B4J249 113 aa1.1□□□□□ -2.23
CHD1-210ENST00000513064 TRAV12-3A0A0B4J271 114 aa1.1□□□□□ -2.23
CHD1-210ENST00000513064 UBE2L5PA0A1B0GUS4 154 aa1.1□□□□□ -2.23
CHD1-210ENST00000513064 TMEM189A5PLL7 270 aa1.1□□□□□ -2.23
CHD1-210ENST00000513064 TMEM238C9JI98 176 aa1.1□□□□□ -2.23
CHD1-210ENST00000513064 NDUFB6O95139 128 aa1.1□□□□□ -2.23
CHD1-210ENST00000513064 SLC25A5P05141 298 aaKnown RBP1.1□□□□□ -2.23
CHD1-210ENST00000513064 SLC25A6P12236 298 aa1.1□□□□□ -2.23
CHD1-210ENST00000513064 IL7P13232 177 aa1.1□□□□□ -2.23
CHD1-210ENST00000513064 RPL7P18124 248 aaKnown RBP1.1□□□□□ -2.23
CHD1-210ENST00000513064 S100A4P26447 101 aaKnown RBP1.1□□□□□ -2.23
CHD1-210ENST00000513064 ATP5G3P48201 142 aa1.1□□□□□ -2.23
CHD1-210ENST00000513064 FXYD2P54710 66 aa1.1□□□□□ -2.23
CHD1-210ENST00000513064 ZNF345Q14585 488 aa1.1□□□□□ -2.23
CHD1-210ENST00000513064 SPINK13Q1W4C9 94 aa1.1□□□□□ -2.23
CHD1-210ENST00000513064 KHDC3LQ587J8 217 aa1.1□□□□□ -2.23
CHD1-210ENST00000513064 NMSQ5H8A3 153 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms