RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 GAGE7O76087 117 aa6.76□□□□□ -1.33
MSH3-203ENST00000512531 GAGE12FP0CL80 117 aa6.76□□□□□ -1.33
MSH3-203ENST00000512531 GAGE12GP0CL81 117 aa6.76□□□□□ -1.33
MSH3-203ENST00000512531 GAGE12IP0CL82 117 aa6.76□□□□□ -1.33
MSH3-203ENST00000512531 ZNF22P17026 224 aaPredicted RBP6.76□□□□□ -1.33
MSH3-203ENST00000512531 EMP1P54849 157 aa6.76□□□□□ -1.33
MSH3-203ENST00000512531 UBE2D3P61077 147 aa6.76□□□□□ -1.33
MSH3-203ENST00000512531 UBE2D2P62837 147 aa6.76□□□□□ -1.33
MSH3-203ENST00000512531 Q6ZTI0 123 aa6.76□□□□□ -1.33
MSH3-203ENST00000512531 SLC25A29Q8N8R3 303 aa6.76□□□□□ -1.33
MSH3-203ENST00000512531 EPPK1P58107 5090 aaKnown RBP6.75□□□□□ -1.33
MSH3-203ENST00000512531 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.75□□□□□ -1.33
MSH3-203ENST00000512531 A0A0J9YXV3 536 aa6.75□□□□□ -1.33
MSH3-203ENST00000512531 A0A0J9YY99 117 aa6.75□□□□□ -1.33
MSH3-203ENST00000512531 TEX48A0A1B0GUV7 120 aa6.75□□□□□ -1.33
MSH3-203ENST00000512531 A0A1B0GWB2 263 aa6.75□□□□□ -1.33
MSH3-203ENST00000512531 IGKV2-29A2NJV5 120 aaPredicted RBP6.75□□□□□ -1.33
MSH3-203ENST00000512531 GAGE12HA6NDE8 117 aa6.75□□□□□ -1.33
MSH3-203ENST00000512531 LYRM9A8MSI8 78 aa6.75□□□□□ -1.33
MSH3-203ENST00000512531 J3QR89 54 aa6.75□□□□□ -1.33
MSH3-203ENST00000512531 K7EP13 123 aa6.75□□□□□ -1.33
MSH3-203ENST00000512531 SBSPONQ8IVN8 264 aa6.75□□□□□ -1.33
MSH3-203ENST00000512531 TTTY13Q9BZ97 58 aa6.75□□□□□ -1.33
MSH3-203ENST00000512531 IGHV3-38A0A0C4DH36 116 aa6.74□□□□□ -1.33
MSH3-203ENST00000512531 GAGE12JA6NER3 117 aa6.74□□□□□ -1.33
MSH3-203ENST00000512531 A8MZ25 164 aa6.74□□□□□ -1.33
MSH3-203ENST00000512531 PRYO14603 147 aa6.74□□□□□ -1.33
MSH3-203ENST00000512531 GAGE4Q13068 117 aa6.74□□□□□ -1.33
MSH3-203ENST00000512531 GAGE5Q13069 117 aa6.74□□□□□ -1.33
MSH3-203ENST00000512531 SFTA2Q6UW10 78 aa6.74□□□□□ -1.33
MSH3-203ENST00000512531 CSNK1G2-AS1Q8NCQ2 148 aa6.74□□□□□ -1.33
MSH3-203ENST00000512531 CBY1Q9Y3M2 126 aa6.74□□□□□ -1.33
MSH3-203ENST00000512531 TIMM17BO60830 172 aa6.73□□□□□ -1.33
MSH3-203ENST00000512531 IGHV3-30-3P0DP02 117 aa6.73□□□□□ -1.33
MSH3-203ENST00000512531 IFITM1P13164 125 aa6.73□□□□□ -1.33
MSH3-203ENST00000512531 UBE2D1P51668 147 aa6.73□□□□□ -1.33
MSH3-203ENST00000512531 DEFB104AQ8WTQ1 72 aa6.73□□□□□ -1.33
MSH3-203ENST00000512531 TM2D3Q9BRN9 247 aa6.73□□□□□ -1.33
MSH3-203ENST00000512531 NDUFA12Q9UI09 145 aa6.73□□□□□ -1.33
MSH3-203ENST00000512531 CSMD3Q7Z407 3707 aa6.73□□□□□ -1.33
MSH3-203ENST00000512531 STARD9Q9P2P6 4700 aa6.72□□□□□ -1.33
MSH3-203ENST00000512531 TRBV20-1A0A075B6N2 111 aa6.72□□□□□ -1.33
MSH3-203ENST00000512531 A0A0J9YXY3 114 aa6.72□□□□□ -1.33
MSH3-203ENST00000512531 IGLL5B9A064 214 aa6.72□□□□□ -1.33
MSH3-203ENST00000512531 F8W1H4 67 aa6.72□□□□□ -1.33
MSH3-203ENST00000512531 PRM2P04554 102 aa6.72□□□□□ -1.33
MSH3-203ENST00000512531 HERV-K104P63124 156 aa6.72□□□□□ -1.33
MSH3-203ENST00000512531 Q6ZUT4 128 aa6.72□□□□□ -1.33
MSH3-203ENST00000512531 SH2D6Q7Z4S9 175 aa6.72□□□□□ -1.33
MSH3-203ENST00000512531 FAM19A3Q7Z5A8 133 aa6.72□□□□□ -1.33
MSH3-203ENST00000512531 VSIG2Q96IQ7 327 aa6.72□□□□□ -1.33
MSH3-203ENST00000512531 OPRPNQ99935 248 aaPredicted RBP6.72□□□□□ -1.33
MSH3-203ENST00000512531 IGLV5-45A0A087WSX0 123 aa6.71□□□□□ -1.34
MSH3-203ENST00000512531 GIG44P09565 113 aaPredicted RBP6.71□□□□□ -1.34
MSH3-203ENST00000512531 PRO1854Q9UHT4 67 aa6.71□□□□□ -1.34
MSH3-203ENST00000512531 PRO0255Q9UI72 69 aa6.71□□□□□ -1.34
MSH3-203ENST00000512531 NACAE9PAV3 2078 aa6.7□□□□□ -1.34
MSH3-203ENST00000512531 A0A0B4J2C4 111 aa6.7□□□□□ -1.34
MSH3-203ENST00000512531 IGHV3-30P01768 117 aa6.7□□□□□ -1.34
MSH3-203ENST00000512531 COX6CP09669 75 aa6.7□□□□□ -1.34
MSH3-203ENST00000512531 SCGB1C2P0DMR2 95 aa6.7□□□□□ -1.34
MSH3-203ENST00000512531 IGHV3-30-5P0DP03 117 aa6.7□□□□□ -1.34
MSH3-203ENST00000512531 MIFP14174 115 aa6.7□□□□□ -1.34
MSH3-203ENST00000512531 ZFAND6Q6FIF0 208 aa6.7□□□□□ -1.34
MSH3-203ENST00000512531 RNF183Q96D59 192 aa6.7□□□□□ -1.34
MSH3-203ENST00000512531 CHCHD5Q9BSY4 110 aa6.7□□□□□ -1.34
MSH3-203ENST00000512531 SPANXDQ9BXN6 97 aa6.7□□□□□ -1.34
MSH3-203ENST00000512531 WFDC10AQ9H1F0 79 aa6.7□□□□□ -1.34
MSH3-203ENST00000512531 SPANXCQ9NY87 97 aa6.7□□□□□ -1.34
MSH3-203ENST00000512531 IGHV3-64A0A075B6Q5 118 aa6.69□□□□□ -1.34
MSH3-203ENST00000512531 TRBV6-8A0A0A6YYG3 113 aa6.69□□□□□ -1.34
MSH3-203ENST00000512531 PLAC8L1A1L4L8 177 aa6.69□□□□□ -1.34
MSH3-203ENST00000512531 K7ERJ3 54 aa6.69□□□□□ -1.34
MSH3-203ENST00000512531 NDUFA1O15239 70 aa6.69□□□□□ -1.34
MSH3-203ENST00000512531 APOMO95445 188 aa6.69□□□□□ -1.34
MSH3-203ENST00000512531 DEFB130BP0DP73 79 aa6.69□□□□□ -1.34
MSH3-203ENST00000512531 DEFB130AP0DP74 79 aa6.69□□□□□ -1.34
MSH3-203ENST00000512531 FHL2Q14192 279 aa6.69□□□□□ -1.34
MSH3-203ENST00000512531 Q1RN00 199 aa6.69□□□□□ -1.34
MSH3-203ENST00000512531 C10orf126Q8N4M7 172 aa6.69□□□□□ -1.34
MSH3-203ENST00000512531 LINC00612Q8N6U2 182 aa6.69□□□□□ -1.34
MSH3-203ENST00000512531 ATP6V0E2Q8NHE4 81 aa6.69□□□□□ -1.34
MSH3-203ENST00000512531 CDC42SE2Q9NRR3 84 aa6.69□□□□□ -1.34
MSH3-203ENST00000512531 ERG28Q9UKR5 140 aa6.69□□□□□ -1.34
MSH3-203ENST00000512531 TRAV13-1A0A0B4J241 112 aa6.68□□□□□ -1.34
MSH3-203ENST00000512531 LOC107984156A0A0G2JMH3 177 aa6.68□□□□□ -1.34
MSH3-203ENST00000512531 PRSS2P07478 247 aa6.68□□□□□ -1.34
MSH3-203ENST00000512531 SPINK8P0C7L1 97 aa6.68□□□□□ -1.34
MSH3-203ENST00000512531 PSMB2P49721 201 aa6.68□□□□□ -1.34
MSH3-203ENST00000512531 DAD1P61803 113 aa6.68□□□□□ -1.34
MSH3-203ENST00000512531 CEMP1Q6PRD7 247 aaPredicted RBP6.68□□□□□ -1.34
MSH3-203ENST00000512531 ARL17AQ8IVW1 177 aa6.68□□□□□ -1.34
MSH3-203ENST00000512531 PAX4O43316 350 aa6.67□□□□□ -1.34
MSH3-203ENST00000512531 SPART-AS1P0CW21 52 aa6.67□□□□□ -1.34
MSH3-203ENST00000512531 IGHV4-30-4P0DP06 118 aa6.67□□□□□ -1.34
MSH3-203ENST00000512531 TSPEAR-AS2P59090 65 aa6.67□□□□□ -1.34
MSH3-203ENST00000512531 SS18Q15532 418 aa6.67□□□□□ -1.34
MSH3-203ENST00000512531 MIAQ16674 131 aa6.67□□□□□ -1.34
MSH3-203ENST00000512531 OCIAD2Q56VL3 154 aa6.67□□□□□ -1.34
MSH3-203ENST00000512531 RNASE13Q5GAN3 156 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms