RNA–Protein interactions for RNA: ENST00000512380.1

PDLIM3-208, Transcript of PDZ and LIM domain 3, humanhuman

TSL 2

Gene PDLIM3, Length 764 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-208ENST00000512380 H3BRN7 92 aa3.92□□□□□ -1.78
PDLIM3-208ENST00000512380 M0R378 163 aa3.92□□□□□ -1.78
PDLIM3-208ENST00000512380 RPL28P46779 137 aaKnown RBP3.92□□□□□ -1.78
PDLIM3-208ENST00000512380 SERF2P84101 59 aa3.92□□□□□ -1.78
PDLIM3-208ENST00000512380 PSMG4Q5JS54 123 aa3.92□□□□□ -1.78
PDLIM3-208ENST00000512380 AMMECR1LQ6DCA0 310 aa3.92□□□□□ -1.78
PDLIM3-208ENST00000512380 RPL7L1Q6DKI1 246 aaKnown RBP3.92□□□□□ -1.78
PDLIM3-208ENST00000512380 KCNRGQ8N5I3 272 aa3.92□□□□□ -1.78
PDLIM3-208ENST00000512380 HYLS1Q96M11 299 aa3.92□□□□□ -1.78
PDLIM3-208ENST00000512380 SCGB3A1Q96QR1 104 aa3.92□□□□□ -1.78
PDLIM3-208ENST00000512380 R4GN34 69 aa3.92□□□□□ -1.78
PDLIM3-208ENST00000512380 C11orf86A6NJI1 115 aa3.91□□□□□ -1.78
PDLIM3-208ENST00000512380 H7BYZ3 331 aa3.91□□□□□ -1.78
PDLIM3-208ENST00000512380 BCL2P10415 239 aa3.91□□□□□ -1.78
PDLIM3-208ENST00000512380 RPS28P62857 69 aaKnown RBP3.91□□□□□ -1.78
PDLIM3-208ENST00000512380 PSG9Q00887 426 aa3.91□□□□□ -1.78
PDLIM3-208ENST00000512380 SBSPONQ8IVN8 264 aa3.91□□□□□ -1.78
PDLIM3-208ENST00000512380 TCTE3Q8IZS6 198 aa3.91□□□□□ -1.78
PDLIM3-208ENST00000512380 RPP25LQ8N5L8 163 aaKnown RBP3.91□□□□□ -1.78
PDLIM3-208ENST00000512380 OR4B1Q8NGF8 309 aa3.91□□□□□ -1.78
PDLIM3-208ENST00000512380 ZNF471Q9BX82 626 aaPredicted RBP3.91□□□□□ -1.78
PDLIM3-208ENST00000512380 RPRMQ9NS64 109 aa3.91□□□□□ -1.78
PDLIM3-208ENST00000512380 SPANXCQ9NY87 97 aa3.91□□□□□ -1.78
PDLIM3-208ENST00000512380 G3V3Q6 166 aa3.9□□□□□ -1.79
PDLIM3-208ENST00000512380 H3BQ15 152 aa3.9□□□□□ -1.79
PDLIM3-208ENST00000512380 MOBPQ13875 183 aa3.9□□□□□ -1.79
PDLIM3-208ENST00000512380 ZNF345Q14585 488 aa3.9□□□□□ -1.79
PDLIM3-208ENST00000512380 DNLZQ5SXM8 178 aa3.9□□□□□ -1.79
PDLIM3-208ENST00000512380 EIF5AL1Q6IS14 154 aaKnown RBP3.9□□□□□ -1.79
PDLIM3-208ENST00000512380 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.9□□□□□ -1.79
PDLIM3-208ENST00000512380 PSMG3Q9BT73 122 aaPredicted RBP3.9□□□□□ -1.79
PDLIM3-208ENST00000512380 MRPL32Q9BYC8 188 aaKnown RBP3.9□□□□□ -1.79
PDLIM3-208ENST00000512380 WFDC10AQ9H1F0 79 aa3.9□□□□□ -1.79
PDLIM3-208ENST00000512380 CYTL1Q9NRR1 136 aa3.9□□□□□ -1.79
PDLIM3-208ENST00000512380 TMEM14CQ9P0S9 112 aa3.9□□□□□ -1.79
PDLIM3-208ENST00000512380 IGKV2-28A0A075B6P5 120 aa3.89□□□□□ -1.79
PDLIM3-208ENST00000512380 ZNF705FA8MVS1 300 aaPredicted RBP3.89□□□□□ -1.79
PDLIM3-208ENST00000512380 TMEM256-PLSCR3K7ERE1 68 aa3.89□□□□□ -1.79
PDLIM3-208ENST00000512380 IGKV2D-28P01615 120 aa3.89□□□□□ -1.79
PDLIM3-208ENST00000512380 PYYP10082 97 aa3.89□□□□□ -1.79
PDLIM3-208ENST00000512380 TPT1P13693 172 aaKnown RBP3.89□□□□□ -1.79
PDLIM3-208ENST00000512380 KHDC3LQ587J8 217 aa3.89□□□□□ -1.79
PDLIM3-208ENST00000512380 FAM74A1Q5RGS3 127 aa3.89□□□□□ -1.79
PDLIM3-208ENST00000512380 LCN15Q6UWW0 184 aa3.89□□□□□ -1.79
PDLIM3-208ENST00000512380 C10orf126Q8N4M7 172 aa3.89□□□□□ -1.79
PDLIM3-208ENST00000512380 SLC50A1Q9BRV3 221 aa3.89□□□□□ -1.79
PDLIM3-208ENST00000512380 TMEM126AQ9H061 195 aa3.89□□□□□ -1.79
PDLIM3-208ENST00000512380 A0A1B0GX51 115 aa3.88□□□□□ -1.79
PDLIM3-208ENST00000512380 TMEM189A5PLL7 270 aa3.88□□□□□ -1.79
PDLIM3-208ENST00000512380 GNRH2O43555 120 aa3.88□□□□□ -1.79
PDLIM3-208ENST00000512380 ZNF705BP0CI00 300 aaPredicted RBP3.88□□□□□ -1.79
PDLIM3-208ENST00000512380 IGLC2P0DOY2 106 aa3.88□□□□□ -1.79
PDLIM3-208ENST00000512380 DEFB1P60022 68 aa3.88□□□□□ -1.79
PDLIM3-208ENST00000512380 UBE2BP63146 152 aa3.88□□□□□ -1.79
PDLIM3-208ENST00000512380 LINC00322Q6ZN03 302 aaPredicted RBP3.88□□□□□ -1.79
PDLIM3-208ENST00000512380 FOXI2Q6ZQN5 318 aa3.88□□□□□ -1.79
PDLIM3-208ENST00000512380 CMTM2Q8TAZ6 248 aa3.88□□□□□ -1.79
PDLIM3-208ENST00000512380 SFT2D1Q8WV19 159 aa3.88□□□□□ -1.79
PDLIM3-208ENST00000512380 FAM167A-AS1Q96KT0 104 aa3.88□□□□□ -1.79
PDLIM3-208ENST00000512380 HIST1H2BLQ99880 126 aa3.88□□□□□ -1.79
PDLIM3-208ENST00000512380 HIGD2AQ9BW72 106 aa3.88□□□□□ -1.79
PDLIM3-208ENST00000512380 OTORQ9NRC9 128 aa3.88□□□□□ -1.79
PDLIM3-208ENST00000512380 IGLV2-18A0A075B6J9 118 aa3.87□□□□□ -1.79
PDLIM3-208ENST00000512380 A0A0J9YX75 114 aa3.87□□□□□ -1.79
PDLIM3-208ENST00000512380 UMAD1C9J7I0 102 aa3.87□□□□□ -1.79
PDLIM3-208ENST00000512380 PSCAO43653 123 aa3.87□□□□□ -1.79
PDLIM3-208ENST00000512380 PRB4P10163 310 aaPredicted RBP3.87□□□□□ -1.79
PDLIM3-208ENST00000512380 LGALS3P17931 250 aaKnown RBP3.87□□□□□ -1.79
PDLIM3-208ENST00000512380 UBE2L3P68036 154 aaKnown RBP3.87□□□□□ -1.79
PDLIM3-208ENST00000512380 HIST1H1AQ02539 215 aaPredicted RBP3.87□□□□□ -1.79
PDLIM3-208ENST00000512380 PDE6HQ13956 83 aa3.87□□□□□ -1.79
PDLIM3-208ENST00000512380 GDF5OSQ5U4N7 250 aa3.87□□□□□ -1.79
PDLIM3-208ENST00000512380 PRR15Q8IV56 129 aa3.87□□□□□ -1.79
PDLIM3-208ENST00000512380 LYPD1Q8N2G4 141 aa3.87□□□□□ -1.79
PDLIM3-208ENST00000512380 FAM213BQ8TBF2 198 aa3.87□□□□□ -1.79
PDLIM3-208ENST00000512380 ZC2HC1AQ96GY0 325 aa3.87□□□□□ -1.79
PDLIM3-208ENST00000512380 TMEM167BQ9NRX6 74 aa3.87□□□□□ -1.79
PDLIM3-208ENST00000512380 MRPL16Q9NX20 251 aaKnown RBP3.87□□□□□ -1.79
PDLIM3-208ENST00000512380 SORL1Q92673 2214 aa3.87□□□□□ -1.79
PDLIM3-208ENST00000512380 TRAV7A0A075B6U4 112 aa3.86□□□□□ -1.79
PDLIM3-208ENST00000512380 CTXND1A0A1B0GTU2 59 aa3.86□□□□□ -1.79
PDLIM3-208ENST00000512380 SLC25A5P05141 298 aaKnown RBP3.86□□□□□ -1.79
PDLIM3-208ENST00000512380 CXCL1P09341 107 aa3.86□□□□□ -1.79
PDLIM3-208ENST00000512380 ARL14EPLP0DKL9 152 aa3.86□□□□□ -1.79
PDLIM3-208ENST00000512380 HLA-DRB4P13762 266 aa3.86□□□□□ -1.79
PDLIM3-208ENST00000512380 GCHFRP30047 84 aa3.86□□□□□ -1.79
PDLIM3-208ENST00000512380 RNASE4P34096 147 aaKnown RBP3.86□□□□□ -1.79
PDLIM3-208ENST00000512380 RAB5CP51148 216 aa3.86□□□□□ -1.79
PDLIM3-208ENST00000512380 DPPA3Q6W0C5 159 aa3.86□□□□□ -1.79
PDLIM3-208ENST00000512380 HSPB8Q9UJY1 196 aa3.86□□□□□ -1.79
PDLIM3-208ENST00000512380 HLA-DRB4X5D2U9 266 aa3.86□□□□□ -1.79
PDLIM3-208ENST00000512380 F6UZH7 168 aa3.85□□□□□ -1.79
PDLIM3-208ENST00000512380 M0R3E3 92 aa3.85□□□□□ -1.79
PDLIM3-208ENST00000512380 GPX1P07203 203 aa3.85□□□□□ -1.79
PDLIM3-208ENST00000512380 HTN1P15515 57 aa3.85□□□□□ -1.79
PDLIM3-208ENST00000512380 SPINK13Q1W4C9 94 aa3.85□□□□□ -1.79
PDLIM3-208ENST00000512380 DEFB135Q30KP9 77 aa3.85□□□□□ -1.79
PDLIM3-208ENST00000512380 C9orf62Q8N4C0 152 aa3.85□□□□□ -1.79
PDLIM3-208ENST00000512380 OR5A1Q8NGJ0 315 aa3.85□□□□□ -1.79
PDLIM3-208ENST00000512380 AGPAT4-IT1Q9H0P7 198 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms