RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	ANG	P03950	147 aa	Known RBP	5.08	□□□□□ -1.6
NR1I3-231	ENST00000512340	FCER1G	P30273	86 aa		5.08	□□□□□ -1.6
NR1I3-231	ENST00000512340	MPV17L2	Q567V2	206 aa		5.08	□□□□□ -1.6
NR1I3-231	ENST00000512340		Q6ZUT4	128 aa		5.08	□□□□□ -1.6
NR1I3-231	ENST00000512340	TMEM101	Q96IK0	257 aa		5.08	□□□□□ -1.6
NR1I3-231	ENST00000512340	SPCS1	Q9Y6A9	102 aa		5.08	□□□□□ -1.6
NR1I3-231	ENST00000512340	TRAV26-2	A0A0B4J265	109 aa		5.07	□□□□□ -1.6
NR1I3-231	ENST00000512340		A0A1W2PPM0	123 aa		5.07	□□□□□ -1.6
NR1I3-231	ENST00000512340	SDHAF1	A6NFY7	115 aa		5.07	□□□□□ -1.6
NR1I3-231	ENST00000512340		C9JAW5	83 aa		5.07	□□□□□ -1.6
NR1I3-231	ENST00000512340	RTL8C	O15255	209 aa		5.07	□□□□□ -1.6
NR1I3-231	ENST00000512340	FABP2	P12104	132 aa		5.07	□□□□□ -1.6
NR1I3-231	ENST00000512340	NDUFV3	P56181	108 aa	Known RBP	5.07	□□□□□ -1.6
NR1I3-231	ENST00000512340	KIAA1644	Q3SXP7	199 aa		5.07	□□□□□ -1.6
NR1I3-231	ENST00000512340	FAM104B	Q5XKR9	115 aa		5.07	□□□□□ -1.6
NR1I3-231	ENST00000512340	AMN1	Q8IY45	258 aa		5.07	□□□□□ -1.6
NR1I3-231	ENST00000512340	C18orf32	Q8TCD1	76 aa		5.07	□□□□□ -1.6
NR1I3-231	ENST00000512340	C20orf78	Q9BR46	151 aa		5.07	□□□□□ -1.6
NR1I3-231	ENST00000512340		Q9HAA7	133 aa		5.07	□□□□□ -1.6
NR1I3-231	ENST00000512340	HECTD4	Q9Y4D8	3996 aa		5.06	□□□□□ -1.6
NR1I3-231	ENST00000512340	FOXI1	Q12951	378 aa		5.06	□□□□□ -1.6
NR1I3-231	ENST00000512340	C4orf48	Q5BLP8	95 aa		5.06	□□□□□ -1.6
NR1I3-231	ENST00000512340	DGAT2L7P	Q6IED9	249 aa		5.06	□□□□□ -1.6
NR1I3-231	ENST00000512340	SLC25A34	Q6PIV7	304 aa		5.06	□□□□□ -1.6
NR1I3-231	ENST00000512340	ORMDL3	Q8N138	153 aa		5.06	□□□□□ -1.6
NR1I3-231	ENST00000512340	UBE2W	Q96B02	151 aa		5.06	□□□□□ -1.6
NR1I3-231	ENST00000512340		Q9UF83	564 aa		5.06	□□□□□ -1.6
NR1I3-231	ENST00000512340	KLK12	Q9UKR0	248 aa		5.06	□□□□□ -1.6
NR1I3-231	ENST00000512340	TRAPPC1	Q9Y5R8	145 aa		5.06	□□□□□ -1.6
NR1I3-231	ENST00000512340	KMT2A	Q03164	3969 aa		5.06	□□□□□ -1.6
NR1I3-231	ENST00000512340		A0A1B0GUV1	79 aa		5.05	□□□□□ -1.6
NR1I3-231	ENST00000512340	CCDC179	H3BU77	68 aa		5.05	□□□□□ -1.6
NR1I3-231	ENST00000512340	IFITM1	P13164	125 aa		5.05	□□□□□ -1.6
NR1I3-231	ENST00000512340	KRTDAP	P60985	99 aa		5.05	□□□□□ -1.6
NR1I3-231	ENST00000512340	SUMO2	P61956	95 aa	Known RBP	5.05	□□□□□ -1.6
NR1I3-231	ENST00000512340	MIA	Q16674	131 aa		5.05	□□□□□ -1.6
NR1I3-231	ENST00000512340	C14orf177	Q52M58	125 aa		5.05	□□□□□ -1.6
NR1I3-231	ENST00000512340	MEIG1	Q5JSS6	88 aa		5.05	□□□□□ -1.6
NR1I3-231	ENST00000512340	TMEM136	Q6ZRR5	245 aa		5.05	□□□□□ -1.6
NR1I3-231	ENST00000512340	BAALC	Q8WXS3	180 aa		5.05	□□□□□ -1.6
NR1I3-231	ENST00000512340	RPL39L	Q96EH5	51 aa	Known RBP	5.05	□□□□□ -1.6
NR1I3-231	ENST00000512340	TMEM70	Q9BUB7	260 aa		5.05	□□□□□ -1.6
NR1I3-231	ENST00000512340	CDIP1	Q9H305	208 aa		5.05	□□□□□ -1.6
NR1I3-231	ENST00000512340	KIAA1109	Q2LD37	5005 aa		5.04	□□□□□ -1.6
NR1I3-231	ENST00000512340	IGKV2D-24	A0A075B6R9	120 aa		5.04	□□□□□ -1.6
NR1I3-231	ENST00000512340	TRAV8-4	A0A0B4J246	113 aa		5.04	□□□□□ -1.6
NR1I3-231	ENST00000512340	TRBV27	A0A0K0K1C4	114 aa		5.04	□□□□□ -1.6
NR1I3-231	ENST00000512340		A0A1B0GXF2	115 aa		5.04	□□□□□ -1.6
NR1I3-231	ENST00000512340	HLA-DQA1	P01909	254 aa		5.04	□□□□□ -1.6
NR1I3-231	ENST00000512340	MT-ND6	P03923	174 aa		5.04	□□□□□ -1.6
NR1I3-231	ENST00000512340	MRPL51	Q4U2R6	128 aa	Known RBP	5.04	□□□□□ -1.6
NR1I3-231	ENST00000512340	RNF185	Q96GF1	192 aa		5.04	□□□□□ -1.6
NR1I3-231	ENST00000512340	PRELID3A	Q96N28	172 aa		5.04	□□□□□ -1.6
NR1I3-231	ENST00000512340	KRTAP1-5	Q9BYS1	174 aa		5.04	□□□□□ -1.6
NR1I3-231	ENST00000512340		D6R8Y8	96 aa		5.03	□□□□□ -1.6
NR1I3-231	ENST00000512340	NUPR1	O60356	82 aa		5.03	□□□□□ -1.6
NR1I3-231	ENST00000512340	SERF1A	O75920	110 aa		5.03	□□□□□ -1.6
NR1I3-231	ENST00000512340	MT-ATP8	P03928	68 aa		5.03	□□□□□ -1.6
NR1I3-231	ENST00000512340	POLR2K	P53803	58 aa	Known RBP	5.03	□□□□□ -1.6
NR1I3-231	ENST00000512340	TNP2	Q05952	138 aa		5.03	□□□□□ -1.6
NR1I3-231	ENST00000512340	GAGE2B	Q13066	116 aa		5.03	□□□□□ -1.6
NR1I3-231	ENST00000512340	GAGE2E	Q4V326	116 aa		5.03	□□□□□ -1.6
NR1I3-231	ENST00000512340	NTM-AS1	Q6ZSK4	140 aa		5.03	□□□□□ -1.6
NR1I3-231	ENST00000512340	NTN5	Q8WTR8	489 aa	Predicted RBP	5.03	□□□□□ -1.6
NR1I3-231	ENST00000512340	GAGE2D	Q9UEU5	116 aa		5.03	□□□□□ -1.6
NR1I3-231	ENST00000512340	C16orf90	A8MZG2	172 aa		5.02	□□□□□ -1.61
NR1I3-231	ENST00000512340		H3BUT2	72 aa		5.02	□□□□□ -1.61
NR1I3-231	ENST00000512340		K7EMI3	77 aa		5.02	□□□□□ -1.61
NR1I3-231	ENST00000512340	C3orf79	P0CE67	100 aa		5.02	□□□□□ -1.61
NR1I3-231	ENST00000512340	GCSH	P23434	173 aa		5.02	□□□□□ -1.61
NR1I3-231	ENST00000512340	XG	P55808	180 aa		5.02	□□□□□ -1.61
NR1I3-231	ENST00000512340	REG3A	Q06141	175 aa		5.02	□□□□□ -1.61
NR1I3-231	ENST00000512340	BAGE3	Q86Y29	109 aa		5.02	□□□□□ -1.61
NR1I3-231	ENST00000512340	LINC00269	Q8N2A0	174 aa		5.02	□□□□□ -1.61
NR1I3-231	ENST00000512340	SMIM2	Q9BVW6	85 aa		5.02	□□□□□ -1.61
NR1I3-231	ENST00000512340	GNB1L	Q9BYB4	327 aa		5.02	□□□□□ -1.61
NR1I3-231	ENST00000512340	NXT2	Q9NPJ8	142 aa	Known RBP	5.02	□□□□□ -1.61
NR1I3-231	ENST00000512340		A0A087WTM6	91 aa		5.01	□□□□□ -1.61
NR1I3-231	ENST00000512340	LINC01549	A6NIU2	74 aa		5.01	□□□□□ -1.61
NR1I3-231	ENST00000512340	SMKR1	H3BMG3	65 aa		5.01	□□□□□ -1.61
NR1I3-231	ENST00000512340	TSHB	P01222	138 aa		5.01	□□□□□ -1.61
NR1I3-231	ENST00000512340	FGF6	P10767	208 aa		5.01	□□□□□ -1.61
NR1I3-231	ENST00000512340	LINC00310	P59036	64 aa		5.01	□□□□□ -1.61
NR1I3-231	ENST00000512340	ORMDL2	Q53FV1	153 aa		5.01	□□□□□ -1.61
NR1I3-231	ENST00000512340	SPATA12	Q7Z6I5	190 aa		5.01	□□□□□ -1.61
NR1I3-231	ENST00000512340	NRAC	Q8N912	160 aa		5.01	□□□□□ -1.61
NR1I3-231	ENST00000512340	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	5	□□□□□ -1.61
NR1I3-231	ENST00000512340	IGKV2-29	A2NJV5	120 aa	Predicted RBP	5	□□□□□ -1.61
NR1I3-231	ENST00000512340		H3BMG7	143 aa		5	□□□□□ -1.61
NR1I3-231	ENST00000512340	SS18	Q15532	418 aa		5	□□□□□ -1.61
NR1I3-231	ENST00000512340	PAPPA-AS1	Q5QFB9	102 aa		5	□□□□□ -1.61
NR1I3-231	ENST00000512340		Q6ZRN7	208 aa	Predicted RBP	5	□□□□□ -1.61
NR1I3-231	ENST00000512340	NAA38	Q9BRA0	125 aa	Known RBP	5	□□□□□ -1.61
NR1I3-231	ENST00000512340	TIMM21	Q9BVV7	248 aa		5	□□□□□ -1.61
NR1I3-231	ENST00000512340	PRR34	Q9NV39	138 aa		5	□□□□□ -1.61
NR1I3-231	ENST00000512340	SYS1-DBNDD2	H3BUS1	97 aa		4.99	□□□□□ -1.61
NR1I3-231	ENST00000512340	NPY	P01303	97 aa		4.99	□□□□□ -1.61
NR1I3-231	ENST00000512340	IFI27	P40305	119 aa	Predicted RBP	4.99	□□□□□ -1.61
NR1I3-231	ENST00000512340	TAL2	Q16559	108 aa		4.99	□□□□□ -1.61
NR1I3-231	ENST00000512340	ENHO	Q6UWT2	76 aa		4.99	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms