RNA–Protein interactions for RNA: ENST00000512258.1

MSH3-202, Transcript of mutS homolog 3, humanhuman

TSL 3

Gene MSH3, Length 677 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-202ENST00000512258 Q6ZR54 194 aa3.41□□□□□ -1.86
MSH3-202ENST00000512258 MRPL52Q86TS9 123 aaKnown RBP3.41□□□□□ -1.86
MSH3-202ENST00000512258 LINC00269Q8N2A0 174 aa3.41□□□□□ -1.86
MSH3-202ENST00000512258 TOMM6Q96B49 74 aa3.41□□□□□ -1.86
MSH3-202ENST00000512258 KMT2AQ03164 3969 aa3.41□□□□□ -1.86
MSH3-202ENST00000512258 IGLV10-54A0A075B6I4 117 aa3.4□□□□□ -1.87
MSH3-202ENST00000512258 IGLV4-3A0A075B6K6 122 aa3.4□□□□□ -1.87
MSH3-202ENST00000512258 IGIPA6NJ69 53 aa3.4□□□□□ -1.87
MSH3-202ENST00000512258 IBA57-AS1B1ANH7 110 aa3.4□□□□□ -1.87
MSH3-202ENST00000512258 H7C423 109 aa3.4□□□□□ -1.87
MSH3-202ENST00000512258 HSBP1O75506 76 aa3.4□□□□□ -1.87
MSH3-202ENST00000512258 RAB5BP61020 215 aa3.4□□□□□ -1.87
MSH3-202ENST00000512258 PDZD11Q5EBL8 140 aa3.4□□□□□ -1.87
MSH3-202ENST00000512258 OR5A1Q8NGJ0 315 aa3.4□□□□□ -1.87
MSH3-202ENST00000512258 UBE2WQ96B02 151 aa3.4□□□□□ -1.87
MSH3-202ENST00000512258 CHCHD1Q96BP2 118 aaKnown RBP3.4□□□□□ -1.87
MSH3-202ENST00000512258 SCGB3A1Q96QR1 104 aa3.4□□□□□ -1.87
MSH3-202ENST00000512258 Q9HAA7 133 aa3.4□□□□□ -1.87
MSH3-202ENST00000512258 CDC42SE2Q9NRR3 84 aa3.4□□□□□ -1.87
MSH3-202ENST00000512258 CYSLTR1Q9Y271 337 aa3.4□□□□□ -1.87
MSH3-202ENST00000512258 K7EMI3 77 aa3.39□□□□□ -1.87
MSH3-202ENST00000512258 HBDP02042 147 aa3.39□□□□□ -1.87
MSH3-202ENST00000512258 FABP4P15090 132 aa3.39□□□□□ -1.87
MSH3-202ENST00000512258 REG3AQ06141 175 aa3.39□□□□□ -1.87
MSH3-202ENST00000512258 COA6Q5JTJ3 125 aaKnown RBP3.39□□□□□ -1.87
MSH3-202ENST00000512258 DGAT2L7PQ6IED9 249 aa3.39□□□□□ -1.87
MSH3-202ENST00000512258 ERASQ7Z444 233 aa3.39□□□□□ -1.87
MSH3-202ENST00000512258 ZNF664Q8N3J9 261 aa3.39□□□□□ -1.87
MSH3-202ENST00000512258 TMEM18Q96B42 140 aa3.39□□□□□ -1.87
MSH3-202ENST00000512258 TMEM101Q96IK0 257 aa3.39□□□□□ -1.87
MSH3-202ENST00000512258 TIMM21Q9BVV7 248 aa3.39□□□□□ -1.87
MSH3-202ENST00000512258 SPANXA1Q9NS26 97 aa3.39□□□□□ -1.87
MSH3-202ENST00000512258 PRR34Q9NV39 138 aa3.39□□□□□ -1.87
MSH3-202ENST00000512258 PYGO1Q9Y3Y4 419 aa3.39□□□□□ -1.87
MSH3-202ENST00000512258 SACSQ9NZJ4 4579 aa3.39□□□□□ -1.87
MSH3-202ENST00000512258 RYR3Q15413 4870 aa3.39□□□□□ -1.87
MSH3-202ENST00000512258 TRAV13-1A0A0B4J241 112 aa3.38□□□□□ -1.87
MSH3-202ENST00000512258 LINC00959A0A1B0GUT2 108 aa3.38□□□□□ -1.87
MSH3-202ENST00000512258 ZNF25P17030 456 aaPredicted RBP3.38□□□□□ -1.87
MSH3-202ENST00000512258 PKIAP61925 76 aa3.38□□□□□ -1.87
MSH3-202ENST00000512258 SNRPEP62304 92 aaKnown RBP3.38□□□□□ -1.87
MSH3-202ENST00000512258 MRPS36P82909 103 aaKnown RBP3.38□□□□□ -1.87
MSH3-202ENST00000512258 KRTAP26-1Q6PEX3 210 aa3.38□□□□□ -1.87
MSH3-202ENST00000512258 Q6ZRN7 208 aaPredicted RBP3.38□□□□□ -1.87
MSH3-202ENST00000512258 SPATA12Q7Z6I5 190 aa3.38□□□□□ -1.87
MSH3-202ENST00000512258 MAPKAPK5-AS1Q8N8E1 139 aa3.38□□□□□ -1.87
MSH3-202ENST00000512258 BAALCQ8WXS3 180 aa3.38□□□□□ -1.87
MSH3-202ENST00000512258 TMEM141Q96I45 108 aa3.38□□□□□ -1.87
MSH3-202ENST00000512258 TIMM17AQ99595 171 aa3.38□□□□□ -1.87
MSH3-202ENST00000512258 CSDC2Q9Y534 153 aaKnown RBP3.38□□□□□ -1.87
MSH3-202ENST00000512258 DNAH6Q9C0G6 4158 aa3.37□□□□□ -1.87
MSH3-202ENST00000512258 IGKV2D-24A0A075B6R9 120 aa3.37□□□□□ -1.87
MSH3-202ENST00000512258 TRAV9-2A0A087WT02 112 aa3.37□□□□□ -1.87
MSH3-202ENST00000512258 A0A0J9YXV3 536 aa3.37□□□□□ -1.87
MSH3-202ENST00000512258 H0Y8G0 127 aa3.37□□□□□ -1.87
MSH3-202ENST00000512258 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.37□□□□□ -1.87
MSH3-202ENST00000512258 LECT2O14960 151 aa3.37□□□□□ -1.87
MSH3-202ENST00000512258 RTL8CO15255 209 aa3.37□□□□□ -1.87
MSH3-202ENST00000512258 CCL25O15444 150 aa3.37□□□□□ -1.87
MSH3-202ENST00000512258 CRPP02741 224 aa3.37□□□□□ -1.87
MSH3-202ENST00000512258 XCL1P47992 114 aa3.37□□□□□ -1.87
MSH3-202ENST00000512258 UBE2D1P51668 147 aa3.37□□□□□ -1.87
MSH3-202ENST00000512258 COX6A2Q02221 97 aa3.37□□□□□ -1.87
MSH3-202ENST00000512258 WFDC2Q14508 124 aa3.37□□□□□ -1.87
MSH3-202ENST00000512258 TTC32Q5I0X7 151 aa3.37□□□□□ -1.87
MSH3-202ENST00000512258 C1orf134Q5TEV5 83 aa3.37□□□□□ -1.87
MSH3-202ENST00000512258 HIST3H2BBQ8N257 126 aa3.37□□□□□ -1.87
MSH3-202ENST00000512258 C6orf223Q8N319 242 aa3.37□□□□□ -1.87
MSH3-202ENST00000512258 C10orf126Q8N4M7 172 aa3.37□□□□□ -1.87
MSH3-202ENST00000512258 CHCHD10Q8WYQ3 142 aaPredicted RBP3.37□□□□□ -1.87
MSH3-202ENST00000512258 IFI27L1Q96BM0 104 aa3.37□□□□□ -1.87
MSH3-202ENST00000512258 AMELXQ99217 191 aa3.37□□□□□ -1.87
MSH3-202ENST00000512258 VCX2Q9H322 139 aa3.37□□□□□ -1.87
MSH3-202ENST00000512258 CST9LQ9H4G1 147 aa3.37□□□□□ -1.87
MSH3-202ENST00000512258 DNAH10Q8IVF4 4471 aa3.36□□□□□ -1.87
MSH3-202ENST00000512258 TRAV8-3A0A0A6YYJ7 113 aa3.36□□□□□ -1.87
MSH3-202ENST00000512258 C5orf52A6NGY3 159 aa3.36□□□□□ -1.87
MSH3-202ENST00000512258 LEPROTL1O95214 131 aa3.36□□□□□ -1.87
MSH3-202ENST00000512258 S100A6P06703 90 aa3.36□□□□□ -1.87
MSH3-202ENST00000512258 G0S2P27469 103 aa3.36□□□□□ -1.87
MSH3-202ENST00000512258 FUSP35637 526 aaKnown RBP eCLIP3.36□□□□□ -1.87
MSH3-202ENST00000512258 SMAGPQ0VAQ4 97 aa3.36□□□□□ -1.87
MSH3-202ENST00000512258 PMVKQ15126 192 aa3.36□□□□□ -1.87
MSH3-202ENST00000512258 MIAQ16674 131 aa3.36□□□□□ -1.87
MSH3-202ENST00000512258 LINC00242Q5T6M2 205 aa3.36□□□□□ -1.87
MSH3-202ENST00000512258 TEX43Q6ZNM6 134 aa3.36□□□□□ -1.87
MSH3-202ENST00000512258 HIST1H2BLQ99880 126 aa3.36□□□□□ -1.87
MSH3-202ENST00000512258 PMCHL2Q9BQD1 86 aa3.36□□□□□ -1.87
MSH3-202ENST00000512258 DNAH2Q9P225 4427 aa3.35□□□□□ -1.87
MSH3-202ENST00000512258 IGLV4-69A0A075B6H9 119 aa3.35□□□□□ -1.87
MSH3-202ENST00000512258 K7EP13 123 aa3.35□□□□□ -1.87
MSH3-202ENST00000512258 ATP5LO75964 103 aa3.35□□□□□ -1.87
MSH3-202ENST00000512258 PRSS1P07477 247 aa3.35□□□□□ -1.87
MSH3-202ENST00000512258 C3orf79P0CE67 100 aa3.35□□□□□ -1.87
MSH3-202ENST00000512258 SS18Q15532 418 aa3.35□□□□□ -1.87
MSH3-202ENST00000512258 Q6ZN92 141 aa3.35□□□□□ -1.87
MSH3-202ENST00000512258 C5orf38Q86SI9 138 aa3.35□□□□□ -1.87
MSH3-202ENST00000512258 PRR26Q8N8Z3 221 aa3.35□□□□□ -1.87
MSH3-202ENST00000512258 TRAV8-4A0A0B4J246 113 aa3.34□□□□□ -1.87
MSH3-202ENST00000512258 IGHV3OR16-9A0A0B4J2B5 98 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms