RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 IGHV1OR15-1A0A075B7D0 117 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 IGHV3OR15-7A0A075B7D8 119 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 TRAV4A0A0B4J268 109 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 K7EMI3 77 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 NDUFC1O43677 76 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 C3orf79P0CE67 100 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 SPINK9Q5DT21 86 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 NRACQ8N912 160 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 NUP35Q8NFH5 326 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 U3KQK5 164 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 IGHV4-28A0A0C4DH34 117 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 IGKV2-24A0A0C4DH68 120 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 I3L3M4 83 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 IGHV4-59P01825 116 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 PATE4P0C8F1 98 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 FXYD7P58549 80 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 SPAG11BQ08648 103 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 SPINK6Q6UWN8 80 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 Q8NDZ9 215 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 C20orf144Q9BQM9 153 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 CSTL1Q9H114 145 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 CDIP1Q9H305 208 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 MRPL35Q9NZE8 188 aaKnown RBP1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 TMEM14CQ9P0S9 112 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 PRO0255Q9UI72 69 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 LENEPQ9Y5L5 61 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 TEX49A0A1B0GTD5 131 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 NKX2-6A6NCS4 301 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 SDHAF1A6NFY7 115 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 LY6LH3BQJ8 138 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 LST1O00453 97 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 TSHBP01222 138 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 SPINK8P0C7L1 97 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 ATP5EP56381 51 aaPredicted RBP1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 ETDBQ3ZM63 59 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 PRR30Q53SZ7 412 aaPredicted RBP1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 C2orf66Q6UXQ4 117 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 Q86TA4 180 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 CSNK1G2-AS1Q8NCQ2 148 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 TMEM263Q8WUH6 116 aaKnown RBP1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 C20orf173Q96LM9 149 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 LIMD2Q9BT23 127 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 BPESC1Q9GZL8 116 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 VPREB3Q9UKI3 123 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 V9GYV3 84 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 X6R8D5 127 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 TRBV30A0A0K0K1B3 111 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 FAM231BA6NCW3 169 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 C15orf62A8K5M9 175 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 IGLV2-23P01705 113 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 ARMS2P0C7Q2 107 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 FAM19A3Q7Z5A8 133 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 VMO1Q7Z5L0 202 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 C20orf197Q8N268 126 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 RPRMLQ8N4K4 120 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 ZNF491Q8N8L2 437 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 CLUHP3Q96NS8 147 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 PRO1854Q9UHT4 67 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 TRAV12-2A0A075B6T6 113 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 A0A096LNI7 61 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 TINCRA0A1B0GVN0 87 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 TMEM256-PLSCR3K7ERE1 68 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 CRYGDP07320 174 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 CCL2P13500 99 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 LINC00483Q53H64 154 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 ATP5EP2Q5VTU8 51 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 LGALS9CQ6DKI2 356 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 NTN5Q8WTR8 489 aaPredicted RBP1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 PYGO1Q9Y3Y4 419 aa1.24□□□□□ -2.21
TRAPPC13-211ENST00000512009 IZUMO1RA6ND01 250 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 SMIM9A6NGZ8 99 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 HIGD1CA8MV81 97 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 H3BUA1 57 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 J3KT08 172 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 P0DMU3 169 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 FAM231AP0DMU4 169 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 FAM231CP0DMU5 169 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 PYYP10082 97 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 FAM27E3Q08E93 113 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 Q6ZQT7 251 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 C14orf178Q8N769 122 aaPredicted RBP1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 MUC7Q8TAX7 377 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 C4orf3Q8WVX3 66 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 AGPAT4-IT1Q9H0P7 198 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 DKK2Q9UBU2 259 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 A0A087X0K7 114 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 TRBV10-1A0A0K0K1A3 114 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 IGLV1-44P01699 117 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 COX7BP24311 80 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 BSPH1Q075Z2 132 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 C12orf74Q32Q52 190 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 FAM19A1Q7Z5A9 133 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 FAM19A2Q8N3H0 131 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 C8orf49Q96NF6 230 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 SND1-IT1Q9HBX3 110 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 NEBP20929 6669 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 TRAV10A0A0B4J240 114 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 IGHV5-51A0A0C4DH38 117 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 A0A1B0GV90 55 aa1.23□□□□□ -2.21
TRAPPC13-211ENST00000512009 LINC00473A8K010 186 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms