RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 SERP2Q8N6R1 65 aa3.55□□□□□ -1.84
TRAPPC11-208ENST00000511955 CYSTM1Q9H1C7 97 aa3.55□□□□□ -1.84
TRAPPC11-208ENST00000511955 PHLDA3Q9Y5J5 127 aa3.55□□□□□ -1.84
TRAPPC11-208ENST00000511955 NBEAL1Q6ZS30 2694 aa3.55□□□□□ -1.84
TRAPPC11-208ENST00000511955 LOC107984156A0A0G2JMH3 177 aa3.55□□□□□ -1.84
TRAPPC11-208ENST00000511955 ODF3BA8MYP8 253 aa3.55□□□□□ -1.84
TRAPPC11-208ENST00000511955 IGLV1-47P01700 117 aa3.55□□□□□ -1.84
TRAPPC11-208ENST00000511955 ATP5EP56381 51 aaPredicted RBP3.55□□□□□ -1.84
TRAPPC11-208ENST00000511955 FXYD4P59646 89 aa3.55□□□□□ -1.84
TRAPPC11-208ENST00000511955 FHL2Q14192 279 aa3.55□□□□□ -1.84
TRAPPC11-208ENST00000511955 KRTAP24-1Q3LI83 254 aa3.55□□□□□ -1.84
TRAPPC11-208ENST00000511955 ARL17AQ8IVW1 177 aa3.55□□□□□ -1.84
TRAPPC11-208ENST00000511955 FAM104AQ969W3 186 aa3.55□□□□□ -1.84
TRAPPC11-208ENST00000511955 C8orf49Q96NF6 230 aa3.55□□□□□ -1.84
TRAPPC11-208ENST00000511955 PSENENQ9NZ42 101 aa3.55□□□□□ -1.84
TRAPPC11-208ENST00000511955 IGLV5-39A0A0G2JS06 123 aa3.54□□□□□ -1.84
TRAPPC11-208ENST00000511955 SAA2P0DJI9 122 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC11-208ENST00000511955 TSPEAR-AS2P59090 65 aa3.54□□□□□ -1.84
TRAPPC11-208ENST00000511955 UBE2D3P61077 147 aa3.54□□□□□ -1.84
TRAPPC11-208ENST00000511955 UBE2D2P62837 147 aa3.54□□□□□ -1.84
TRAPPC11-208ENST00000511955 GDF5OSQ5U4N7 250 aa3.54□□□□□ -1.84
TRAPPC11-208ENST00000511955 ADM2Q7Z4H4 148 aa3.54□□□□□ -1.84
TRAPPC11-208ENST00000511955 LINC00476Q8WZB0 136 aa3.54□□□□□ -1.84
TRAPPC11-208ENST00000511955 TRBV25-1A0A075B6N4 114 aa3.54□□□□□ -1.84
TRAPPC11-208ENST00000511955 A0A087WW49 117 aa3.54□□□□□ -1.84
TRAPPC11-208ENST00000511955 TMSB15BA0A087X1C1 80 aa3.54□□□□□ -1.84
TRAPPC11-208ENST00000511955 IGHV3-16A0A0C4DH30 117 aa3.54□□□□□ -1.84
TRAPPC11-208ENST00000511955 NPYP01303 97 aa3.54□□□□□ -1.84
TRAPPC11-208ENST00000511955 FXYD3Q14802 87 aa3.54□□□□□ -1.84
TRAPPC11-208ENST00000511955 C9orf66Q5T8R8 295 aa3.54□□□□□ -1.84
TRAPPC11-208ENST00000511955 LINC01600Q96MT4 127 aa3.54□□□□□ -1.84
TRAPPC11-208ENST00000511955 IGHV1-3A0A0C4DH29 117 aa3.53□□□□□ -1.84
TRAPPC11-208ENST00000511955 MYMXA0A1B0GTQ4 84 aa3.53□□□□□ -1.84
TRAPPC11-208ENST00000511955 A6NN06 94 aa3.53□□□□□ -1.84
TRAPPC11-208ENST00000511955 H3BVH4 76 aa3.53□□□□□ -1.84
TRAPPC11-208ENST00000511955 MPLKIPQ8TAP9 179 aa3.53□□□□□ -1.84
TRAPPC11-208ENST00000511955 SCGB3A1Q96QR1 104 aa3.53□□□□□ -1.84
TRAPPC11-208ENST00000511955 SLC50A1Q9BRV3 221 aa3.53□□□□□ -1.84
TRAPPC11-208ENST00000511955 LINC00574Q9H8X3 128 aa3.53□□□□□ -1.84
TRAPPC11-208ENST00000511955 LINC01548A6NM66 108 aa3.53□□□□□ -1.84
TRAPPC11-208ENST00000511955 C3orf84H3BNL1 204 aa3.53□□□□□ -1.84
TRAPPC11-208ENST00000511955 SLC25A20O43772 301 aa3.53□□□□□ -1.84
TRAPPC11-208ENST00000511955 PRR4Q16378 134 aa3.53□□□□□ -1.84
TRAPPC11-208ENST00000511955 MINOS1Q5TGZ0 78 aa3.53□□□□□ -1.84
TRAPPC11-208ENST00000511955 ORMDL3Q8N138 153 aa3.53□□□□□ -1.84
TRAPPC11-208ENST00000511955 ZNF414Q96IQ9 312 aa3.53□□□□□ -1.84
TRAPPC11-208ENST00000511955 MINOS1-NBL1R4GNA1 71 aa3.53□□□□□ -1.84
TRAPPC11-208ENST00000511955 TRRAPQ9Y4A5 3859 aa3.53□□□□□ -1.85
TRAPPC11-208ENST00000511955 TRBV7-3A0A075B6L6 115 aa3.52□□□□□ -1.85
TRAPPC11-208ENST00000511955 TRBV6-6A0A0A6YYG2 114 aa3.52□□□□□ -1.85
TRAPPC11-208ENST00000511955 IGKV3D-20A0A0C4DH25 116 aa3.52□□□□□ -1.85
TRAPPC11-208ENST00000511955 A0A1B0GW54 56 aa3.52□□□□□ -1.85
TRAPPC11-208ENST00000511955 PROP1O75360 226 aa3.52□□□□□ -1.85
TRAPPC11-208ENST00000511955 IAPPP10997 89 aa3.52□□□□□ -1.85
TRAPPC11-208ENST00000511955 RPL27AP46776 148 aaKnown RBP3.52□□□□□ -1.85
TRAPPC11-208ENST00000511955 C10orf25Q5T742 122 aa3.52□□□□□ -1.85
TRAPPC11-208ENST00000511955 LCE1DQ5T752 114 aa3.52□□□□□ -1.85
TRAPPC11-208ENST00000511955 B9D2Q9BPU9 175 aa3.52□□□□□ -1.85
TRAPPC11-208ENST00000511955 DNHD1Q96M86 4753 aa3.52□□□□□ -1.85
TRAPPC11-208ENST00000511955 NACAE9PAV3 2078 aa3.52□□□□□ -1.85
TRAPPC11-208ENST00000511955 IGLV4-3A0A075B6K6 122 aa3.52□□□□□ -1.85
TRAPPC11-208ENST00000511955 PRB4P10163 310 aaPredicted RBP3.52□□□□□ -1.85
TRAPPC11-208ENST00000511955 PLGLAQ15195 96 aa3.52□□□□□ -1.85
TRAPPC11-208ENST00000511955 ZNF56Q15929 161 aa3.52□□□□□ -1.85
TRAPPC11-208ENST00000511955 MRPL51Q4U2R6 128 aaKnown RBP3.52□□□□□ -1.85
TRAPPC11-208ENST00000511955 TMEM170BQ5T4T1 132 aa3.52□□□□□ -1.85
TRAPPC11-208ENST00000511955 WWC2-AS2Q96NR7 200 aa3.52□□□□□ -1.85
TRAPPC11-208ENST00000511955 TRGV9Q99603 122 aa3.52□□□□□ -1.85
TRAPPC11-208ENST00000511955 C8orf17Q9NRJ1 99 aa3.52□□□□□ -1.85
TRAPPC11-208ENST00000511955 WNK1Q9H4A3 2382 aa3.52□□□□□ -1.85
TRAPPC11-208ENST00000511955 MGAM2Q2M2H8 2515 aa3.51□□□□□ -1.85
TRAPPC11-208ENST00000511955 TET2Q6N021 2002 aaPredicted RBP3.51□□□□□ -1.85
TRAPPC11-208ENST00000511955 A6NED7 52 aa3.51□□□□□ -1.85
TRAPPC11-208ENST00000511955 H3BMM0 161 aa3.51□□□□□ -1.85
TRAPPC11-208ENST00000511955 ARL14EPLP0DKL9 152 aa3.51□□□□□ -1.85
TRAPPC11-208ENST00000511955 APELAP0DMC3 54 aa3.51□□□□□ -1.85
TRAPPC11-208ENST00000511955 RHOHQ15669 191 aa3.51□□□□□ -1.85
TRAPPC11-208ENST00000511955 ZFP2Q6ZN57 461 aa3.51□□□□□ -1.85
TRAPPC11-208ENST00000511955 UBE2WQ96B02 151 aa3.51□□□□□ -1.85
TRAPPC11-208ENST00000511955 C19orf71A6NCJ1 209 aa3.5□□□□□ -1.85
TRAPPC11-208ENST00000511955 A6NDX4 124 aa3.5□□□□□ -1.85
TRAPPC11-208ENST00000511955 LINC01549A6NIU2 74 aa3.5□□□□□ -1.85
TRAPPC11-208ENST00000511955 IGLV2-23P01705 113 aa3.5□□□□□ -1.85
TRAPPC11-208ENST00000511955 IGHV3-11P01762 117 aa3.5□□□□□ -1.85
TRAPPC11-208ENST00000511955 LUZP6Q538Z0 58 aa3.5□□□□□ -1.85
TRAPPC11-208ENST00000511955 SPANXN5Q5MJ07 72 aa3.5□□□□□ -1.85
TRAPPC11-208ENST00000511955 ZNF818PQ6ZRF7 136 aa3.5□□□□□ -1.85
TRAPPC11-208ENST00000511955 ZNF833PQ6ZTB9 187 aa3.5□□□□□ -1.85
TRAPPC11-208ENST00000511955 LINC01006Q8NI28 216 aa3.5□□□□□ -1.85
TRAPPC11-208ENST00000511955 CAMK2N2Q96S95 79 aa3.5□□□□□ -1.85
TRAPPC11-208ENST00000511955 TIMM8BQ9Y5J9 83 aaPredicted RBP3.5□□□□□ -1.85
TRAPPC11-208ENST00000511955 NOTCH1P46531 2555 aa3.5□□□□□ -1.85
TRAPPC11-208ENST00000511955 K7EMI3 77 aa3.5□□□□□ -1.85
TRAPPC11-208ENST00000511955 IGLV2-14P01704 120 aa3.5□□□□□ -1.85
TRAPPC11-208ENST00000511955 C10orf99Q6UWK7 81 aa3.5□□□□□ -1.85
TRAPPC11-208ENST00000511955 IFI27L1Q96BM0 104 aa3.5□□□□□ -1.85
TRAPPC11-208ENST00000511955 RETNLBQ9BQ08 111 aa3.5□□□□□ -1.85
TRAPPC11-208ENST00000511955 IGKV2D-26A0A0A0MRZ7 120 aa3.49□□□□□ -1.85
TRAPPC11-208ENST00000511955 PRAC2D3DTV9 90 aa3.49□□□□□ -1.85
TRAPPC11-208ENST00000511955 KRTAP4-16G5E9R7 235 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms