RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 HIST1H2BOP23527 126 aa3.6□□□□□ -1.83
PROM1-211ENST00000511153 HIST1H2BBP33778 126 aa3.6□□□□□ -1.83
PROM1-211ENST00000511153 HIST1H2BDP58876 126 aa3.6□□□□□ -1.83
PROM1-211ENST00000511153 HIST1H2BCP62807 126 aa3.6□□□□□ -1.83
PROM1-211ENST00000511153 RPL32P62910 135 aaKnown RBP3.6□□□□□ -1.83
PROM1-211ENST00000511153 HIST2H2BEQ16778 126 aa3.6□□□□□ -1.83
PROM1-211ENST00000511153 ORMDL2Q53FV1 153 aa3.6□□□□□ -1.83
PROM1-211ENST00000511153 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.6□□□□□ -1.83
PROM1-211ENST00000511153 MAPKAPK5-AS1Q8N8E1 139 aa3.6□□□□□ -1.83
PROM1-211ENST00000511153 HIST1H2BHQ93079 126 aa3.6□□□□□ -1.83
PROM1-211ENST00000511153 FAM104AQ969W3 186 aa3.6□□□□□ -1.83
PROM1-211ENST00000511153 LINC00526Q96FQ7 95 aa3.6□□□□□ -1.83
PROM1-211ENST00000511153 HIST1H2BNQ99877 126 aa3.6□□□□□ -1.83
PROM1-211ENST00000511153 HIST1H2BMQ99879 126 aa3.6□□□□□ -1.83
PROM1-211ENST00000511153 CDC42SE2Q9NRR3 84 aa3.6□□□□□ -1.83
PROM1-211ENST00000511153 CYSLTR1Q9Y271 337 aa3.6□□□□□ -1.83
PROM1-211ENST00000511153 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.59□□□□□ -1.83
PROM1-211ENST00000511153 IGLV4-3A0A075B6K6 122 aa3.59□□□□□ -1.83
PROM1-211ENST00000511153 LINC00959A0A1B0GUT2 108 aa3.59□□□□□ -1.83
PROM1-211ENST00000511153 C1orf196B1AJZ1 125 aa3.59□□□□□ -1.83
PROM1-211ENST00000511153 CCL25O15444 150 aa3.59□□□□□ -1.83
PROM1-211ENST00000511153 HSBP1O75506 76 aa3.59□□□□□ -1.83
PROM1-211ENST00000511153 HIGD2BQ4VC39 106 aa3.59□□□□□ -1.83
PROM1-211ENST00000511153 C5orf38Q86SI9 138 aa3.59□□□□□ -1.83
PROM1-211ENST00000511153 ZNF664Q8N3J9 261 aa3.59□□□□□ -1.83
PROM1-211ENST00000511153 C10orf126Q8N4M7 172 aa3.59□□□□□ -1.83
PROM1-211ENST00000511153 CHCHD10Q8WYQ3 142 aaPredicted RBP3.59□□□□□ -1.83
PROM1-211ENST00000511153 TMEM18Q96B42 140 aa3.59□□□□□ -1.83
PROM1-211ENST00000511153 PMCHL2Q9BQD1 86 aa3.59□□□□□ -1.83
PROM1-211ENST00000511153 HBDP02042 147 aa3.59□□□□□ -1.84
PROM1-211ENST00000511153 COX6A2Q02221 97 aa3.59□□□□□ -1.84
PROM1-211ENST00000511153 LINC01620Q4KN68 170 aa3.59□□□□□ -1.84
PROM1-211ENST00000511153 Q6ZRN7 208 aaPredicted RBP3.59□□□□□ -1.84
PROM1-211ENST00000511153 TOMM6Q96B49 74 aa3.59□□□□□ -1.84
PROM1-211ENST00000511153 TMEM141Q96I45 108 aa3.59□□□□□ -1.84
PROM1-211ENST00000511153 PKD1P98161 4303 aa3.58□□□□□ -1.84
PROM1-211ENST00000511153 DYNC1H1Q14204 4646 aaKnown RBP3.58□□□□□ -1.84
PROM1-211ENST00000511153 DNAH5Q8TE73 4624 aa3.58□□□□□ -1.84
PROM1-211ENST00000511153 TRAV8-3A0A0A6YYJ7 113 aa3.58□□□□□ -1.84
PROM1-211ENST00000511153 A0A0J9YXV3 536 aa3.58□□□□□ -1.84
PROM1-211ENST00000511153 A0A1B0GUV1 79 aa3.58□□□□□ -1.84
PROM1-211ENST00000511153 IGIPA6NJ69 53 aa3.58□□□□□ -1.84
PROM1-211ENST00000511153 RAB5BP61020 215 aa3.58□□□□□ -1.84
PROM1-211ENST00000511153 Q0VG73 95 aa3.58□□□□□ -1.84
PROM1-211ENST00000511153 TEX43Q6ZNM6 134 aa3.58□□□□□ -1.84
PROM1-211ENST00000511153 MRPL52Q86TS9 123 aaKnown RBP3.58□□□□□ -1.84
PROM1-211ENST00000511153 Q8N1X5 172 aa3.58□□□□□ -1.84
PROM1-211ENST00000511153 VCX2Q9H322 139 aa3.58□□□□□ -1.84
PROM1-211ENST00000511153 SPANXA1Q9NS26 97 aa3.58□□□□□ -1.84
PROM1-211ENST00000511153 IGHV3-64A0A075B6Q5 118 aa3.57□□□□□ -1.84
PROM1-211ENST00000511153 LINC01546A6NGU7 62 aa3.57□□□□□ -1.84
PROM1-211ENST00000511153 C5orf52A6NGY3 159 aa3.57□□□□□ -1.84
PROM1-211ENST00000511153 H7C423 109 aa3.57□□□□□ -1.84
PROM1-211ENST00000511153 PRSS1P07477 247 aa3.57□□□□□ -1.84
PROM1-211ENST00000511153 ZNF25P17030 456 aaPredicted RBP3.57□□□□□ -1.84
PROM1-211ENST00000511153 PKIAP61925 76 aa3.57□□□□□ -1.84
PROM1-211ENST00000511153 HAMPP81172 84 aa3.57□□□□□ -1.84
PROM1-211ENST00000511153 FOXI1Q12951 378 aa3.57□□□□□ -1.84
PROM1-211ENST00000511153 SS18Q15532 418 aa3.57□□□□□ -1.84
PROM1-211ENST00000511153 KRTAP26-1Q6PEX3 210 aa3.57□□□□□ -1.84
PROM1-211ENST00000511153 Q6ZN92 141 aa3.57□□□□□ -1.84
PROM1-211ENST00000511153 SPATA12Q7Z6I5 190 aa3.57□□□□□ -1.84
PROM1-211ENST00000511153 CHCHD1Q96BP2 118 aaKnown RBP3.57□□□□□ -1.84
PROM1-211ENST00000511153 TIMM21Q9BVV7 248 aa3.57□□□□□ -1.84
PROM1-211ENST00000511153 PRR34Q9NV39 138 aa3.57□□□□□ -1.84
PROM1-211ENST00000511153 PKHD1P08F94 4074 aa3.57□□□□□ -1.84
PROM1-211ENST00000511153 A0A087WTM6 91 aa3.56□□□□□ -1.84
PROM1-211ENST00000511153 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.56□□□□□ -1.84
PROM1-211ENST00000511153 PRYO14603 147 aa3.56□□□□□ -1.84
PROM1-211ENST00000511153 MIAQ16674 131 aa3.56□□□□□ -1.84
PROM1-211ENST00000511153 ERASQ7Z444 233 aa3.56□□□□□ -1.84
PROM1-211ENST00000511153 IFI27L1Q96BM0 104 aa3.56□□□□□ -1.84
PROM1-211ENST00000511153 C2orf88Q9BSF0 95 aa3.56□□□□□ -1.84
PROM1-211ENST00000511153 CST9LQ9H4G1 147 aa3.56□□□□□ -1.84
PROM1-211ENST00000511153 RYR1P21817 5038 aa3.56□□□□□ -1.84
PROM1-211ENST00000511153 hDV102S1A0JD36 115 aa3.55□□□□□ -1.84
PROM1-211ENST00000511153 LRCOL1A6NCL2 159 aa3.55□□□□□ -1.84
PROM1-211ENST00000511153 LEPROTL1O95214 131 aa3.55□□□□□ -1.84
PROM1-211ENST00000511153 SPINK8P0C7L1 97 aa3.55□□□□□ -1.84
PROM1-211ENST00000511153 UBE2D1P51668 147 aa3.55□□□□□ -1.84
PROM1-211ENST00000511153 SNRPEP62304 92 aaKnown RBP3.55□□□□□ -1.84
PROM1-211ENST00000511153 MRPS36P82909 103 aaKnown RBP3.55□□□□□ -1.84
PROM1-211ENST00000511153 LINC00242Q5T6M2 205 aa3.55□□□□□ -1.84
PROM1-211ENST00000511153 NFE4Q86UQ8 179 aa3.55□□□□□ -1.84
PROM1-211ENST00000511153 RMI2Q96E14 147 aa3.55□□□□□ -1.84
PROM1-211ENST00000511153 TIMM17AQ99595 171 aa3.55□□□□□ -1.84
PROM1-211ENST00000511153 TM2D2Q9BX73 214 aa3.55□□□□□ -1.84
PROM1-211ENST00000511153 TOMM7Q9P0U1 55 aa3.55□□□□□ -1.84
PROM1-211ENST00000511153 PYGO1Q9Y3Y4 419 aa3.55□□□□□ -1.84
PROM1-211ENST00000511153 CSDC2Q9Y534 153 aaKnown RBP3.55□□□□□ -1.84
PROM1-211ENST00000511153 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
PROM1-211ENST00000511153 K7EMI3 77 aa3.55□□□□□ -1.84
PROM1-211ENST00000511153 COX7A2LO14548 114 aa3.55□□□□□ -1.84
PROM1-211ENST00000511153 KRTDAPP60985 99 aa3.55□□□□□ -1.84
PROM1-211ENST00000511153 SMAGPQ0VAQ4 97 aa3.55□□□□□ -1.84
PROM1-211ENST00000511153 PMVKQ15126 192 aa3.55□□□□□ -1.84
PROM1-211ENST00000511153 C15orf56Q8N910 161 aa3.55□□□□□ -1.84
PROM1-211ENST00000511153 AMELXQ99217 191 aa3.55□□□□□ -1.84
PROM1-211ENST00000511153 GEMIN7Q9H840 131 aaKnown RBP3.55□□□□□ -1.84
PROM1-211ENST00000511153 TRAV8-4A0A0B4J246 113 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 198.6 ms