RNA–Protein interactions for RNA: ENST00000511105.1

PTPN13-208, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-208ENST00000511105 DSCR10P59022 87 aa3.01□□□□□ -1.93
PTPN13-208ENST00000511105 EIF5AP63241 154 aaKnown RBP3.01□□□□□ -1.93
PTPN13-208ENST00000511105 LINC01556Q5JQF7 62 aa3.01□□□□□ -1.93
PTPN13-208ENST00000511105 ZFP2Q6ZN57 461 aa3.01□□□□□ -1.93
PTPN13-208ENST00000511105 NTM-AS1Q6ZSK4 140 aa3.01□□□□□ -1.93
PTPN13-208ENST00000511105 AKAP14Q86UN6 197 aa3.01□□□□□ -1.93
PTPN13-208ENST00000511105 ZFP82Q8N141 532 aa3.01□□□□□ -1.93
PTPN13-208ENST00000511105 C9orf62Q8N4C0 152 aa3.01□□□□□ -1.93
PTPN13-208ENST00000511105 PTH2Q96A98 100 aa3.01□□□□□ -1.93
PTPN13-208ENST00000511105 TRBV20OR9-2A0A075B6H5 130 aa3□□□□□ -1.93
PTPN13-208ENST00000511105 IGLV10-54A0A075B6I4 117 aa3□□□□□ -1.93
PTPN13-208ENST00000511105 IFNA1P01562 189 aa3□□□□□ -1.93
PTPN13-208ENST00000511105 S100A6P06703 90 aa3□□□□□ -1.93
PTPN13-208ENST00000511105 SMIM17P0DL12 118 aa3□□□□□ -1.93
PTPN13-208ENST00000511105 INAFM2P0DMQ5 153 aa3□□□□□ -1.93
PTPN13-208ENST00000511105 NTF3P20783 257 aa3□□□□□ -1.93
PTPN13-208ENST00000511105 UBE2D3P61077 147 aa3□□□□□ -1.93
PTPN13-208ENST00000511105 UBE2D2P62837 147 aa3□□□□□ -1.93
PTPN13-208ENST00000511105 CD164Q04900 197 aa3□□□□□ -1.93
PTPN13-208ENST00000511105 DNLZQ5SXM8 178 aa3□□□□□ -1.93
PTPN13-208ENST00000511105 ENHOQ6UWT2 76 aa3□□□□□ -1.93
PTPN13-208ENST00000511105 SLC51BQ86UW2 128 aa3□□□□□ -1.93
PTPN13-208ENST00000511105 NIT1Q86X76 327 aa3□□□□□ -1.93
PTPN13-208ENST00000511105 TCTE3Q8IZS6 198 aa3□□□□□ -1.93
PTPN13-208ENST00000511105 Q8N814 137 aa3□□□□□ -1.93
PTPN13-208ENST00000511105 C15orf56Q8N910 161 aa3□□□□□ -1.93
PTPN13-208ENST00000511105 FER1L6-AS1Q8NA97 138 aa3□□□□□ -1.93
PTPN13-208ENST00000511105 CAMK2N2Q96S95 79 aa3□□□□□ -1.93
PTPN13-208ENST00000511105 IGLV1-50A0A075B6I6 118 aa2.99□□□□□ -1.93
PTPN13-208ENST00000511105 TRBV7-3A0A075B6L6 115 aa2.99□□□□□ -1.93
PTPN13-208ENST00000511105 A0A087WX48 190 aa2.99□□□□□ -1.93
PTPN13-208ENST00000511105 SMIM26A0A096LP01 95 aa2.99□□□□□ -1.93
PTPN13-208ENST00000511105 C19orf71A6NCJ1 209 aa2.99□□□□□ -1.93
PTPN13-208ENST00000511105 ZNF861PO60384 105 aa2.99□□□□□ -1.93
PTPN13-208ENST00000511105 HLA-DQA1P01909 254 aa2.99□□□□□ -1.93
PTPN13-208ENST00000511105 ANGP03950 147 aaKnown RBP2.99□□□□□ -1.93
PTPN13-208ENST00000511105 LINC00694P0DN24 101 aa2.99□□□□□ -1.93
PTPN13-208ENST00000511105 BCL2P10415 239 aa2.99□□□□□ -1.93
PTPN13-208ENST00000511105 RAB4BP61018 213 aa2.99□□□□□ -1.93
PTPN13-208ENST00000511105 RPL23P62829 140 aaKnown RBP2.99□□□□□ -1.93
PTPN13-208ENST00000511105 MEF2BQ02080 365 aaPredicted RBP2.99□□□□□ -1.93
PTPN13-208ENST00000511105 MPV17L2Q567V2 206 aa2.99□□□□□ -1.93
PTPN13-208ENST00000511105 SH2D6Q7Z4S9 175 aa2.99□□□□□ -1.93
PTPN13-208ENST00000511105 BOD1L2Q8IYS8 172 aa2.99□□□□□ -1.93
PTPN13-208ENST00000511105 LINC00269Q8N2A0 174 aa2.99□□□□□ -1.93
PTPN13-208ENST00000511105 C10orf126Q8N4M7 172 aa2.99□□□□□ -1.93
PTPN13-208ENST00000511105 RPL39LQ96EH5 51 aaKnown RBP2.99□□□□□ -1.93
PTPN13-208ENST00000511105 TIMM17AQ99595 171 aa2.99□□□□□ -1.93
PTPN13-208ENST00000511105 EIF5A2Q9GZV4 153 aaKnown RBP2.99□□□□□ -1.93
PTPN13-208ENST00000511105 MANBALQ9NQG1 85 aa2.99□□□□□ -1.93
PTPN13-208ENST00000511105 IGLV4-60A0A075B6I1 120 aa2.98□□□□□ -1.93
PTPN13-208ENST00000511105 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.98□□□□□ -1.93
PTPN13-208ENST00000511105 TRBV6-8A0A0A6YYG3 113 aa2.98□□□□□ -1.93
PTPN13-208ENST00000511105 TRAV1-1A0A0B4J248 108 aa2.98□□□□□ -1.93
PTPN13-208ENST00000511105 IGKV2-29A2NJV5 120 aaPredicted RBP2.98□□□□□ -1.93
PTPN13-208ENST00000511105 IGLC6P0CF74 106 aa2.98□□□□□ -1.93
PTPN13-208ENST00000511105 RBX1P62877 108 aa2.98□□□□□ -1.93
PTPN13-208ENST00000511105 C6orf99Q4VX62 202 aa2.98□□□□□ -1.93
PTPN13-208ENST00000511105 Q5VSD8 79 aa2.98□□□□□ -1.93
PTPN13-208ENST00000511105 EIF5AL1Q6IS14 154 aaKnown RBP2.98□□□□□ -1.93
PTPN13-208ENST00000511105 GATD1Q8NB37 220 aa2.98□□□□□ -1.93
PTPN13-208ENST00000511105 TMEM243Q9BU79 118 aa2.98□□□□□ -1.93
PTPN13-208ENST00000511105 MYCBP2O75592 4640 aa2.97□□□□□ -1.93
PTPN13-208ENST00000511105 A0A087WWC5 75 aa2.97□□□□□ -1.93
PTPN13-208ENST00000511105 TRAV8-3A0A0A6YYJ7 113 aa2.97□□□□□ -1.93
PTPN13-208ENST00000511105 IGHV6-1A0A0B4J1U7 121 aa2.97□□□□□ -1.93
PTPN13-208ENST00000511105 A0A0U1RQV1 116 aa2.97□□□□□ -1.93
PTPN13-208ENST00000511105 A0A1B0GVX0 72 aa2.97□□□□□ -1.93
PTPN13-208ENST00000511105 C9JQL5 133 aa2.97□□□□□ -1.93
PTPN13-208ENST00000511105 M0QY20 66 aa2.97□□□□□ -1.93
PTPN13-208ENST00000511105 TCAPO15273 167 aa2.97□□□□□ -1.93
PTPN13-208ENST00000511105 PDE6DO43924 150 aa2.97□□□□□ -1.93
PTPN13-208ENST00000511105 SRP19P09132 144 aaKnown RBP2.97□□□□□ -1.93
PTPN13-208ENST00000511105 RPS20P60866 119 aaKnown RBP2.97□□□□□ -1.93
PTPN13-208ENST00000511105 PCP2Q8IVA1 136 aa2.97□□□□□ -1.93
PTPN13-208ENST00000511105 DPH3Q96FX2 82 aa2.97□□□□□ -1.93
PTPN13-208ENST00000511105 KRTAP4-3Q9BYR4 195 aa2.97□□□□□ -1.93
PTPN13-208ENST00000511105 HERC1Q15751 4861 aa2.96□□□□□ -1.94
PTPN13-208ENST00000511105 IGHV1-24A0A0C4DH33 117 aa2.96□□□□□ -1.94
PTPN13-208ENST00000511105 TRBV10-1A0A0K0K1A3 114 aa2.96□□□□□ -1.94
PTPN13-208ENST00000511105 ZNF727A8MUV8 499 aa2.96□□□□□ -1.94
PTPN13-208ENST00000511105 PANO1I0J062 215 aa2.96□□□□□ -1.94
PTPN13-208ENST00000511105 NCR2O95944 276 aa2.96□□□□□ -1.94
PTPN13-208ENST00000511105 CRPP02741 224 aa2.96□□□□□ -1.94
PTPN13-208ENST00000511105 RASL11AQ6T310 242 aa2.96□□□□□ -1.94
PTPN13-208ENST00000511105 FRZBQ92765 325 aa2.96□□□□□ -1.94
PTPN13-208ENST00000511105 LINC00526Q96FQ7 95 aa2.96□□□□□ -1.94
PTPN13-208ENST00000511105 AP1S3Q96PC3 154 aa2.96□□□□□ -1.94
PTPN13-208ENST00000511105 TCEAL7Q9BRU2 100 aa2.96□□□□□ -1.94
PTPN13-208ENST00000511105 DPH3P1Q9H4G8 78 aa2.96□□□□□ -1.94
PTPN13-208ENST00000511105 NIT2Q9NQR4 276 aa2.96□□□□□ -1.94
PTPN13-208ENST00000511105 VPS13BQ7Z7G8 4022 aa2.95□□□□□ -1.94
PTPN13-208ENST00000511105 TRBV25-1A0A075B6N4 114 aa2.95□□□□□ -1.94
PTPN13-208ENST00000511105 UBE2L6O14933 153 aa2.95□□□□□ -1.94
PTPN13-208ENST00000511105 TRGC1P0CF51 173 aa2.95□□□□□ -1.94
PTPN13-208ENST00000511105 RPS10P46783 165 aaKnown RBP2.95□□□□□ -1.94
PTPN13-208ENST00000511105 ADIRFQ15847 76 aa2.95□□□□□ -1.94
PTPN13-208ENST00000511105 RNASE13Q5GAN3 156 aaKnown RBP2.95□□□□□ -1.94
PTPN13-208ENST00000511105 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.95□□□□□ -1.94
PTPN13-208ENST00000511105 FAM210AQ96ND0 272 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms