RNA–Protein interactions for RNA: ENST00000510710.3

COL1A1-212, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,147 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-212ENST00000510710 HBDP02042 147 aa9.62□□□□□ -0.87
COL1A1-212ENST00000510710 PRSS1P07477 247 aa9.62□□□□□ -0.87
COL1A1-212ENST00000510710 G0S2P27469 103 aa9.62□□□□□ -0.87
COL1A1-212ENST00000510710 RBX1P62877 108 aa9.62□□□□□ -0.87
COL1A1-212ENST00000510710 DGAT2L7PQ6IED9 249 aa9.62□□□□□ -0.87
COL1A1-212ENST00000510710 FAM19A2Q8N3H0 131 aa9.62□□□□□ -0.87
COL1A1-212ENST00000510710 PYGO1Q9Y3Y4 419 aa9.62□□□□□ -0.87
COL1A1-212ENST00000510710 IGLV4-60A0A075B6I1 120 aa9.61□□□□□ -0.87
COL1A1-212ENST00000510710 ZNF25P17030 456 aaPredicted RBP9.61□□□□□ -0.87
COL1A1-212ENST00000510710 PKIAP61925 76 aa9.61□□□□□ -0.87
COL1A1-212ENST00000510710 MIAQ16674 131 aa9.61□□□□□ -0.87
COL1A1-212ENST00000510710 SPANXA1Q9NS26 97 aa9.61□□□□□ -0.87
COL1A1-212ENST00000510710 HMCN2Q8NDA2 5059 aa9.6□□□□□ -0.87
COL1A1-212ENST00000510710 LINC01549A6NIU2 74 aa9.6□□□□□ -0.87
COL1A1-212ENST00000510710 C9orf163Q8N9P6 203 aa9.6□□□□□ -0.87
COL1A1-212ENST00000510710 TIMM17AQ99595 171 aa9.6□□□□□ -0.87
COL1A1-212ENST00000510710 C5orf52A6NGY3 159 aa9.59□□□□□ -0.87
COL1A1-212ENST00000510710 NPSP0C0P6 89 aa9.59□□□□□ -0.87
COL1A1-212ENST00000510710 MRPS36P82909 103 aaKnown RBP9.59□□□□□ -0.87
COL1A1-212ENST00000510710 ERASQ7Z444 233 aa9.59□□□□□ -0.87
COL1A1-212ENST00000510710 CDC42SE2Q9NRR3 84 aa9.59□□□□□ -0.87
COL1A1-212ENST00000510710 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.59□□□□□ -0.87
COL1A1-212ENST00000510710 FAT3Q8TDW7 4589 aa9.59□□□□□ -0.87
COL1A1-212ENST00000510710 IGLV4-3A0A075B6K6 122 aa9.58□□□□□ -0.88
COL1A1-212ENST00000510710 AMMECR1LQ6DCA0 310 aa9.58□□□□□ -0.88
COL1A1-212ENST00000510710 Q6ZUT4 128 aa9.58□□□□□ -0.88
COL1A1-212ENST00000510710 LINC00173Q6ZV60 143 aa9.58□□□□□ -0.88
COL1A1-212ENST00000510710 HIST3H2BBQ8N257 126 aa9.58□□□□□ -0.88
COL1A1-212ENST00000510710 OPRPNQ99935 248 aaPredicted RBP9.58□□□□□ -0.88
COL1A1-212ENST00000510710 S100A6P06703 90 aa9.57□□□□□ -0.88
COL1A1-212ENST00000510710 SNRPEP62304 92 aaKnown RBP9.57□□□□□ -0.88
COL1A1-212ENST00000510710 SMAGPQ0VAQ4 97 aa9.57□□□□□ -0.88
COL1A1-212ENST00000510710 CLPSL2Q6UWE3 100 aa9.57□□□□□ -0.88
COL1A1-212ENST00000510710 Q6ZRU5 148 aa9.57□□□□□ -0.88
COL1A1-212ENST00000510710 OR5A1Q8NGJ0 315 aa9.57□□□□□ -0.88
COL1A1-212ENST00000510710 PACRGQ96M98 296 aaPredicted RBP9.57□□□□□ -0.88
COL1A1-212ENST00000510710 SCGB3A1Q96QR1 104 aa9.57□□□□□ -0.88
COL1A1-212ENST00000510710 UBR4Q5T4S7 5183 aa9.56□□□□□ -0.88
COL1A1-212ENST00000510710 IFITM10A6NMD0 228 aa9.56□□□□□ -0.88
COL1A1-212ENST00000510710 PANO1I0J062 215 aa9.56□□□□□ -0.88
COL1A1-212ENST00000510710 SDIM1Q6ZPB5 146 aa9.56□□□□□ -0.88
COL1A1-212ENST00000510710 LINC00269Q8N2A0 174 aa9.56□□□□□ -0.88
COL1A1-212ENST00000510710 ZNF664Q8N3J9 261 aa9.56□□□□□ -0.88
COL1A1-212ENST00000510710 DPH3Q96FX2 82 aa9.56□□□□□ -0.88
COL1A1-212ENST00000510710 TMEM141Q96I45 108 aa9.56□□□□□ -0.88
COL1A1-212ENST00000510710 TMEM101Q96IK0 257 aa9.56□□□□□ -0.88
COL1A1-212ENST00000510710 AMELXQ99217 191 aa9.56□□□□□ -0.88
COL1A1-212ENST00000510710 PRR34Q9NV39 138 aa9.56□□□□□ -0.88
COL1A1-212ENST00000510710 TMA7Q9Y2S6 64 aaKnown RBP9.56□□□□□ -0.88
COL1A1-212ENST00000510710 MT1HL1P0DM35 61 aa9.55□□□□□ -0.88
COL1A1-212ENST00000510710 ATP5LO75964 103 aa9.54□□□□□ -0.88
COL1A1-212ENST00000510710 LEPROTL1O95214 131 aa9.54□□□□□ -0.88
COL1A1-212ENST00000510710 RNASE13Q5GAN3 156 aaKnown RBP9.54□□□□□ -0.88
COL1A1-212ENST00000510710 ZC2HC1BQ5TFG8 222 aa9.54□□□□□ -0.88
COL1A1-212ENST00000510710 KRTAP26-1Q6PEX3 210 aa9.54□□□□□ -0.88
COL1A1-212ENST00000510710 IFI27L1Q96BM0 104 aa9.54□□□□□ -0.88
COL1A1-212ENST00000510710 PKHD1L1Q86WI1 4243 aa9.54□□□□□ -0.88
COL1A1-212ENST00000510710 hDV102S1A0JD36 115 aa9.53□□□□□ -0.88
COL1A1-212ENST00000510710 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.53□□□□□ -0.88
COL1A1-212ENST00000510710 FABP4P15090 132 aa9.53□□□□□ -0.88
COL1A1-212ENST00000510710 HIST1H2BLQ99880 126 aa9.53□□□□□ -0.88
COL1A1-212ENST00000510710 IGLV10-54A0A075B6I4 117 aa9.52□□□□□ -0.89
COL1A1-212ENST00000510710 REG3AQ06141 175 aa9.52□□□□□ -0.89
COL1A1-212ENST00000510710 HSPB8Q9UJY1 196 aa9.52□□□□□ -0.89
COL1A1-212ENST00000510710 CNBPP62633 177 aaKnown RBP9.51□□□□□ -0.89
COL1A1-212ENST00000510710 CST9LQ9H4G1 147 aa9.51□□□□□ -0.89
COL1A1-212ENST00000510710 IGHV3-64A0A075B6Q5 118 aa9.5□□□□□ -0.89
COL1A1-212ENST00000510710 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.5□□□□□ -0.89
COL1A1-212ENST00000510710 LINC00959A0A1B0GUT2 108 aa9.5□□□□□ -0.89
COL1A1-212ENST00000510710 CIRBPQ14011 172 aaKnown RBP9.5□□□□□ -0.89
COL1A1-212ENST00000510710 PAPPA-AS1Q5QFB9 102 aa9.5□□□□□ -0.89
COL1A1-212ENST00000510710 TEX43Q6ZNM6 134 aa9.5□□□□□ -0.89
COL1A1-212ENST00000510710 FAM19A3Q7Z5A8 133 aa9.5□□□□□ -0.89
COL1A1-212ENST00000510710 VCX2Q9H322 139 aa9.5□□□□□ -0.89
COL1A1-212ENST00000510710 TRAV12-1A0A0B4J245 112 aa9.49□□□□□ -0.89
COL1A1-212ENST00000510710 TRAV8-4A0A0B4J246 113 aa9.49□□□□□ -0.89
COL1A1-212ENST00000510710 S100A2P29034 98 aa9.49□□□□□ -0.89
COL1A1-212ENST00000510710 UBE2D1P51668 147 aa9.49□□□□□ -0.89
COL1A1-212ENST00000510710 PMVKQ15126 192 aa9.49□□□□□ -0.89
COL1A1-212ENST00000510710 Q6ZN92 141 aa9.49□□□□□ -0.89
COL1A1-212ENST00000510710 A0A087WYN8 130 aa9.48□□□□□ -0.89
COL1A1-212ENST00000510710 C3orf79P0CE67 100 aa9.48□□□□□ -0.89
COL1A1-212ENST00000510710 IGKV3OR2-268A0A0C4DH90 116 aa9.47□□□□□ -0.89
COL1A1-212ENST00000510710 CCL25O15444 150 aa9.47□□□□□ -0.89
COL1A1-212ENST00000510710 CHTF8P0CG12 524 aa9.47□□□□□ -0.89
COL1A1-212ENST00000510710 IGLV4-69A0A075B6H9 119 aa9.46□□□□□ -0.9
COL1A1-212ENST00000510710 TRAV13-1A0A0B4J241 112 aa9.46□□□□□ -0.9
COL1A1-212ENST00000510710 SYS1-DBNDD2H3BUS1 97 aa9.46□□□□□ -0.9
COL1A1-212ENST00000510710 SLPIP03973 132 aa9.46□□□□□ -0.9
COL1A1-212ENST00000510710 ODF1Q14990 250 aa9.46□□□□□ -0.9
COL1A1-212ENST00000510710 LINC00242Q5T6M2 205 aa9.46□□□□□ -0.9
COL1A1-212ENST00000510710 C2orf88Q9BSF0 95 aa9.46□□□□□ -0.9
COL1A1-212ENST00000510710 MAP1LC3CQ9BXW4 147 aa9.46□□□□□ -0.9
COL1A1-212ENST00000510710 IGLC3P0DOY3 106 aa9.45□□□□□ -0.9
COL1A1-212ENST00000510710 SPACA4Q8TDM5 124 aa9.45□□□□□ -0.9
COL1A1-212ENST00000510710 C7orf33Q8WU49 177 aa9.45□□□□□ -0.9
COL1A1-212ENST00000510710 CHCHD10Q8WYQ3 142 aaPredicted RBP9.45□□□□□ -0.9
COL1A1-212ENST00000510710 A0A0J9YXV3 536 aa9.44□□□□□ -0.9
COL1A1-212ENST00000510710 COX6A2Q02221 97 aa9.44□□□□□ -0.9
COL1A1-212ENST00000510710 SS18Q15532 418 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms