RNA–Protein interactions for RNA: ENST00000510676.6

PTCD2-208, Transcript of pentatricopeptide repeat domain 2, human

TSL 5

Gene PTCD2, Length 1,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD2-208	ENST00000510676	MB	P02144	154 aa		5.8	□□□□□ -1.48
PTCD2-208	ENST00000510676	MRPL55	Q7Z7F7	128 aa	Known RBP	5.8	□□□□□ -1.48
PTCD2-208	ENST00000510676	RPL39L	Q96EH5	51 aa	Known RBP	5.8	□□□□□ -1.48
PTCD2-208	ENST00000510676	PSMG3	Q9BT73	122 aa	Predicted RBP	5.8	□□□□□ -1.48
PTCD2-208	ENST00000510676	ACTR3C	Q9C0K3	210 aa	Predicted RBP	5.8	□□□□□ -1.48
PTCD2-208	ENST00000510676	CSDC2	Q9Y534	153 aa	Known RBP	5.8	□□□□□ -1.48
PTCD2-208	ENST00000510676	IGHV3OR16-9	A0A0B4J2B5	98 aa		5.79	□□□□□ -1.48
PTCD2-208	ENST00000510676		I3L3M4	83 aa		5.79	□□□□□ -1.48
PTCD2-208	ENST00000510676	SPINK1	P00995	79 aa		5.79	□□□□□ -1.48
PTCD2-208	ENST00000510676	ATP6V0C	P27449	155 aa		5.79	□□□□□ -1.48
PTCD2-208	ENST00000510676	SERF2	P84101	59 aa		5.79	□□□□□ -1.48
PTCD2-208	ENST00000510676	TRAV13-1	A0A0B4J241	112 aa		5.78	□□□□□ -1.48
PTCD2-208	ENST00000510676		F2Z2F3	143 aa		5.78	□□□□□ -1.48
PTCD2-208	ENST00000510676	FHIT	P49789	147 aa		5.78	□□□□□ -1.48
PTCD2-208	ENST00000510676	KIAA0087	Q14695	138 aa		5.78	□□□□□ -1.48
PTCD2-208	ENST00000510676	TPPP3	Q9BW30	176 aa		5.78	□□□□□ -1.48
PTCD2-208	ENST00000510676	NUDT15	Q9NV35	164 aa		5.78	□□□□□ -1.48
PTCD2-208	ENST00000510676	LINC00846	Q9NV44	126 aa		5.78	□□□□□ -1.48
PTCD2-208	ENST00000510676	SIX6	O95475	246 aa		5.77	□□□□□ -1.49
PTCD2-208	ENST00000510676	S100A9	P06702	114 aa	Known RBP	5.77	□□□□□ -1.49
PTCD2-208	ENST00000510676	AKR1C3	P42330	323 aa		5.77	□□□□□ -1.49
PTCD2-208	ENST00000510676	UBE2A	P49459	152 aa		5.77	□□□□□ -1.49
PTCD2-208	ENST00000510676	ZNF726P1	Q15940	193 aa		5.77	□□□□□ -1.49
PTCD2-208	ENST00000510676	KRTAP19-6	Q3LI70	58 aa		5.77	□□□□□ -1.49
PTCD2-208	ENST00000510676	CST9LP1	Q5W188	147 aa		5.77	□□□□□ -1.49
PTCD2-208	ENST00000510676	FAM19A2	Q8N3H0	131 aa		5.77	□□□□□ -1.49
PTCD2-208	ENST00000510676	TNFSF18	Q9UNG2	199 aa		5.77	□□□□□ -1.49
PTCD2-208	ENST00000510676	TRBV6-5	A0A0K0K1A5	114 aa		5.76	□□□□□ -1.49
PTCD2-208	ENST00000510676	UPK1B	O75841	260 aa		5.76	□□□□□ -1.49
PTCD2-208	ENST00000510676	PMCH	P20382	165 aa		5.76	□□□□□ -1.49
PTCD2-208	ENST00000510676		Q8N377	158 aa		5.76	□□□□□ -1.49
PTCD2-208	ENST00000510676	PPP1R1C	Q8WVI7	109 aa		5.76	□□□□□ -1.49
PTCD2-208	ENST00000510676	MDN1	Q9NU22	5596 aa		5.76	□□□□□ -1.49
PTCD2-208	ENST00000510676	C7orf77	A4D0Y5	90 aa		5.75	□□□□□ -1.49
PTCD2-208	ENST00000510676	INMT-MINDY4	F8WBC2	141 aa		5.75	□□□□□ -1.49
PTCD2-208	ENST00000510676	PLA2G10	O15496	165 aa		5.75	□□□□□ -1.49
PTCD2-208	ENST00000510676	S100A5	P33763	92 aa		5.75	□□□□□ -1.49
PTCD2-208	ENST00000510676	RPS29	P62273	56 aa	Known RBP	5.75	□□□□□ -1.49
PTCD2-208	ENST00000510676	TEX261	Q6UWH6	196 aa		5.75	□□□□□ -1.49
PTCD2-208	ENST00000510676	BAGE2	Q86Y30	109 aa		5.75	□□□□□ -1.49
PTCD2-208	ENST00000510676	PLEKHB2	Q96CS7	222 aa		5.75	□□□□□ -1.49
PTCD2-208	ENST00000510676	LINC00167	Q96N53	147 aa		5.75	□□□□□ -1.49
PTCD2-208	ENST00000510676	RNASE7	Q9H1E1	156 aa	Known RBP	5.75	□□□□□ -1.49
PTCD2-208	ENST00000510676	CTXND1	A0A1B0GTU2	59 aa		5.74	□□□□□ -1.49
PTCD2-208	ENST00000510676	CCDC160	A6NGH7	325 aa		5.74	□□□□□ -1.49
PTCD2-208	ENST00000510676	MPC2	O95563	127 aa		5.74	□□□□□ -1.49
PTCD2-208	ENST00000510676	FOXA3	P55318	350 aa	Predicted RBP	5.74	□□□□□ -1.49
PTCD2-208	ENST00000510676	RPS20	P60866	119 aa	Known RBP	5.74	□□□□□ -1.49
PTCD2-208	ENST00000510676	RNASE13	Q5GAN3	156 aa	Known RBP	5.74	□□□□□ -1.49
PTCD2-208	ENST00000510676		Q8NBF4	154 aa		5.74	□□□□□ -1.49
PTCD2-208	ENST00000510676	CNFN	Q9BYD5	112 aa		5.74	□□□□□ -1.49
PTCD2-208	ENST00000510676	TMEM242	Q9NWH2	141 aa		5.74	□□□□□ -1.49
PTCD2-208	ENST00000510676	RPL37AP8	A6NKH3	93 aa		5.73	□□□□□ -1.49
PTCD2-208	ENST00000510676	ZNF727	A8MUV8	499 aa		5.73	□□□□□ -1.49
PTCD2-208	ENST00000510676	PET100	P0DJ07	73 aa		5.73	□□□□□ -1.49
PTCD2-208	ENST00000510676	LYZL1	Q6UWQ5	148 aa		5.73	□□□□□ -1.49
PTCD2-208	ENST00000510676	C2orf82	Q6UX34	121 aa		5.73	□□□□□ -1.49
PTCD2-208	ENST00000510676	STOML3	Q8TAV4	291 aa		5.73	□□□□□ -1.49
PTCD2-208	ENST00000510676	MARVELD1	Q9BSK0	173 aa		5.73	□□□□□ -1.49
PTCD2-208	ENST00000510676	LYRM1	O43325	122 aa		5.72	□□□□□ -1.49
PTCD2-208	ENST00000510676	IL7	P13232	177 aa		5.72	□□□□□ -1.49
PTCD2-208	ENST00000510676	H2BFS	P57053	126 aa		5.72	□□□□□ -1.49
PTCD2-208	ENST00000510676	C9orf62	Q8N4C0	152 aa		5.72	□□□□□ -1.49
PTCD2-208	ENST00000510676	XAGE1A	Q9HD64	81 aa		5.72	□□□□□ -1.49
PTCD2-208	ENST00000510676	TRBV27	A0A0K0K1C4	114 aa		5.71	□□□□□ -1.5
PTCD2-208	ENST00000510676	SLC25A20	O43772	301 aa		5.71	□□□□□ -1.5
PTCD2-208	ENST00000510676	SMAGP	Q0VAQ4	97 aa		5.71	□□□□□ -1.5
PTCD2-208	ENST00000510676		Q6ZUT4	128 aa		5.71	□□□□□ -1.5
PTCD2-208	ENST00000510676	LINC00469	Q8N7U9	141 aa		5.71	□□□□□ -1.5
PTCD2-208	ENST00000510676	POLR2K	P53803	58 aa	Known RBP	5.7	□□□□□ -1.5
PTCD2-208	ENST00000510676	PNRC1	Q12796	327 aa	Predicted RBP	5.7	□□□□□ -1.5
PTCD2-208	ENST00000510676	TIMM21	Q9BVV7	248 aa		5.7	□□□□□ -1.5
PTCD2-208	ENST00000510676	RAB19	A4D1S5	217 aa		5.69	□□□□□ -1.5
PTCD2-208	ENST00000510676	PRLH	P81277	87 aa		5.69	□□□□□ -1.5
PTCD2-208	ENST00000510676	TWIST1	Q15672	202 aa		5.69	□□□□□ -1.5
PTCD2-208	ENST00000510676	CCDC32	Q9BV29	185 aa		5.69	□□□□□ -1.5
PTCD2-208	ENST00000510676	XKRY2	A2RUG3	117 aa		5.68	□□□□□ -1.5
PTCD2-208	ENST00000510676	MT2A	P02795	61 aa		5.68	□□□□□ -1.5
PTCD2-208	ENST00000510676	DEFA1	P59665	94 aa		5.68	□□□□□ -1.5
PTCD2-208	ENST00000510676	FAM104A	Q969W3	186 aa		5.68	□□□□□ -1.5
PTCD2-208	ENST00000510676	GNB1L	Q9BYB4	327 aa		5.68	□□□□□ -1.5
PTCD2-208	ENST00000510676	ST20	Q9HBF5	79 aa		5.68	□□□□□ -1.5
PTCD2-208	ENST00000510676	KMT2D	O14686	5537 aa		5.67	□□□□□ -1.5
PTCD2-208	ENST00000510676	IGLV5-37	A0A075B6J1	123 aa		5.67	□□□□□ -1.5
PTCD2-208	ENST00000510676	TRIAP1	O43715	76 aa		5.67	□□□□□ -1.5
PTCD2-208	ENST00000510676	IFNA1	P01562	189 aa		5.67	□□□□□ -1.5
PTCD2-208	ENST00000510676	RPL32	P62910	135 aa	Known RBP	5.67	□□□□□ -1.5
PTCD2-208	ENST00000510676	SPRR4	Q96PI1	79 aa		5.67	□□□□□ -1.5
PTCD2-208	ENST00000510676	MAP1LC3B2	A6NCE7	125 aa		5.65	□□□□□ -1.5
PTCD2-208	ENST00000510676	TMUB2	Q71RG4	321 aa		5.65	□□□□□ -1.5
PTCD2-208	ENST00000510676	MAP1LC3B	Q9GZQ8	125 aa		5.65	□□□□□ -1.5
PTCD2-208	ENST00000510676	TGIF2-C20orf24	A0A0A6YYL0	155 aa		5.64	□□□□□ -1.51
PTCD2-208	ENST00000510676	NOL3	O60936	208 aa	Known RBP	5.64	□□□□□ -1.51
PTCD2-208	ENST00000510676	RPL35	P42766	123 aa	Known RBP	5.64	□□□□□ -1.51
PTCD2-208	ENST00000510676	MT1F	P04733	61 aa		5.63	□□□□□ -1.51
PTCD2-208	ENST00000510676	SMIM15	Q7Z3B0	74 aa		5.63	□□□□□ -1.51
PTCD2-208	ENST00000510676	FAM19A1	Q7Z5A9	133 aa		5.63	□□□□□ -1.51
PTCD2-208	ENST00000510676	CBLN2	Q8IUK8	224 aa		5.63	□□□□□ -1.51
PTCD2-208	ENST00000510676	LINC01561	Q8N1V8	128 aa		5.63	□□□□□ -1.51
PTCD2-208	ENST00000510676	VCY	O14598	125 aa		5.62	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms