RNA–Protein interactions for RNA: ENST00000510545.5

CLDND1-222, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-222ENST00000510545 TRAV26-1A0A087WT03 109 aa11.23□□□□□ -0.61
CLDND1-222ENST00000510545 SMAGPQ0VAQ4 97 aa11.23□□□□□ -0.61
CLDND1-222ENST00000510545 C10orf126Q8N4M7 172 aa11.23□□□□□ -0.61
CLDND1-222ENST00000510545 F5H768 121 aa11.23□□□□□ -0.61
CLDND1-222ENST00000510545 K7ERU9 68 aa11.22□□□□□ -0.61
CLDND1-222ENST00000510545 HTN3P15516 51 aa11.22□□□□□ -0.61
CLDND1-222ENST00000510545 HERVK_113P63121 156 aa11.22□□□□□ -0.61
CLDND1-222ENST00000510545 VPS25Q9BRG1 176 aa11.22□□□□□ -0.61
CLDND1-222ENST00000510545 SRSF9Q13242 221 aaKnown RBP eCLIP11.21□□□□□ -0.62
CLDND1-222ENST00000510545 C12orf74Q32Q52 190 aa11.2□□□□□ -0.62
CLDND1-222ENST00000510545 SPANXB1Q9NS25 103 aaPredicted RBP11.2□□□□□ -0.62
CLDND1-222ENST00000510545 IGKV3OR2-268A0A0C4DH90 116 aa11.19□□□□□ -0.62
CLDND1-222ENST00000510545 A0A0J9YXY3 114 aa11.19□□□□□ -0.62
CLDND1-222ENST00000510545 PRB2P02812 416 aaPredicted RBP11.19□□□□□ -0.62
CLDND1-222ENST00000510545 IGLV5-39A0A0G2JS06 123 aa11.18□□□□□ -0.62
CLDND1-222ENST00000510545 IGHV3-30P01768 117 aa11.18□□□□□ -0.62
CLDND1-222ENST00000510545 IGHV3-30-5P0DP03 117 aa11.18□□□□□ -0.62
CLDND1-222ENST00000510545 NDUFA12Q9UI09 145 aa11.18□□□□□ -0.62
CLDND1-222ENST00000510545 SMIM1B2RUZ4 78 aa11.18□□□□□ -0.62
CLDND1-222ENST00000510545 TMEM262E9PQX1 116 aa11.17□□□□□ -0.62
CLDND1-222ENST00000510545 ZFAND6Q6FIF0 208 aa11.17□□□□□ -0.62
CLDND1-222ENST00000510545 IGLL5B9A064 214 aa11.17□□□□□ -0.62
CLDND1-222ENST00000510545 A0A1B0GWB2 263 aa11.16□□□□□ -0.62
CLDND1-222ENST00000510545 LITAFQ99732 161 aa11.16□□□□□ -0.62
CLDND1-222ENST00000510545 Q8N3U1 123 aa11.15□□□□□ -0.62
CLDND1-222ENST00000510545 MGAM2Q2M2H8 2515 aa11.15□□□□□ -0.62
CLDND1-222ENST00000510545 A0A1B0GUV1 79 aa11.15□□□□□ -0.62
CLDND1-222ENST00000510545 TEX48A0A1B0GUV7 120 aa11.14□□□□□ -0.63
CLDND1-222ENST00000510545 MRPL23Q16540 153 aaKnown RBP11.14□□□□□ -0.63
CLDND1-222ENST00000510545 ADAMTSL4-AS1Q5T5F5 129 aa11.14□□□□□ -0.63
CLDND1-222ENST00000510545 LINC00959A0A1B0GUT2 108 aa11.12□□□□□ -0.63
CLDND1-222ENST00000510545 Q6ZTC4 211 aa11.12□□□□□ -0.63
CLDND1-222ENST00000510545 MDFIQ99750 246 aa11.12□□□□□ -0.63
CLDND1-222ENST00000510545 C11orf68Q9H3H3 251 aaKnown RBP11.12□□□□□ -0.63
CLDND1-222ENST00000510545 ICOSQ9Y6W8 199 aa11.12□□□□□ -0.63
CLDND1-222ENST00000510545 IGHV3OR16-9A0A0B4J2B5 98 aa11.12□□□□□ -0.63
CLDND1-222ENST00000510545 A0A0J9YWU9 116 aa11.12□□□□□ -0.63
CLDND1-222ENST00000510545 NDUFA1O15239 70 aa11.12□□□□□ -0.63
CLDND1-222ENST00000510545 CLPSL2Q6UWE3 100 aa11.12□□□□□ -0.63
CLDND1-222ENST00000510545 TMEM238C9JI98 176 aa11.11□□□□□ -0.63
CLDND1-222ENST00000510545 MUSTN1Q8IVN3 82 aa11.11□□□□□ -0.63
CLDND1-222ENST00000510545 Q9H8V8 135 aa11.11□□□□□ -0.63
CLDND1-222ENST00000510545 HUWE1Q7Z6Z7 4374 aaKnown RBP11.11□□□□□ -0.63
CLDND1-222ENST00000510545 TMEM238LA0A1B0GVL6 79 aa11.1□□□□□ -0.63
CLDND1-222ENST00000510545 A6NJY4 79 aa11.1□□□□□ -0.63
CLDND1-222ENST00000510545 K7EIL1 84 aa11.1□□□□□ -0.63
CLDND1-222ENST00000510545 EIF4EBP3O60516 100 aaPredicted RBP11.09□□□□□ -0.63
CLDND1-222ENST00000510545 APOMO95445 188 aa11.09□□□□□ -0.63
CLDND1-222ENST00000510545 A4D1N5 150 aa11.09□□□□□ -0.63
CLDND1-222ENST00000510545 CFC1BP0CG36 223 aa11.09□□□□□ -0.63
CLDND1-222ENST00000510545 CFC1P0CG37 223 aa11.09□□□□□ -0.63
CLDND1-222ENST00000510545 ZNF625Q96I27 306 aaPredicted RBP11.09□□□□□ -0.63
CLDND1-222ENST00000510545 NANOS2P60321 138 aaKnown RBP11.08□□□□□ -0.64
CLDND1-222ENST00000510545 RPL24P83731 157 aaKnown RBP11.08□□□□□ -0.64
CLDND1-222ENST00000510545 C5orf38Q86SI9 138 aa11.08□□□□□ -0.64
CLDND1-222ENST00000510545 LINC00269Q8N2A0 174 aa11.08□□□□□ -0.64
CLDND1-222ENST00000510545 LELP1Q5T871 98 aa11.08□□□□□ -0.64
CLDND1-222ENST00000510545 A0A087WZ39 114 aa11.07□□□□□ -0.64
CLDND1-222ENST00000510545 H3BMG7 143 aa11.07□□□□□ -0.64
CLDND1-222ENST00000510545 XCL1P47992 114 aa11.07□□□□□ -0.64
CLDND1-222ENST00000510545 DAND5Q8N907 189 aa11.07□□□□□ -0.64
CLDND1-222ENST00000510545 SPANXDQ9BXN6 97 aa11.07□□□□□ -0.64
CLDND1-222ENST00000510545 SPANXCQ9NY87 97 aa11.07□□□□□ -0.64
CLDND1-222ENST00000510545 F8W1H4 67 aa11.06□□□□□ -0.64
CLDND1-222ENST00000510545 PRSS2P07478 247 aa11.06□□□□□ -0.64
CLDND1-222ENST00000510545 KPRPQ5T749 579 aaPredicted RBP11.06□□□□□ -0.64
CLDND1-222ENST00000510545 LYPD5Q6UWN5 251 aa11.06□□□□□ -0.64
CLDND1-222ENST00000510545 SH2D6Q7Z4S9 175 aa11.06□□□□□ -0.64
CLDND1-222ENST00000510545 PGPEP1Q9NXJ5 209 aa11.06□□□□□ -0.64
CLDND1-222ENST00000510545 NPC2P61916 151 aa11.06□□□□□ -0.64
CLDND1-222ENST00000510545 MIAQ16674 131 aa11.06□□□□□ -0.64
CLDND1-222ENST00000510545 TIMM17BO60830 172 aa11.05□□□□□ -0.64
CLDND1-222ENST00000510545 ANGP03950 147 aaKnown RBP11.05□□□□□ -0.64
CLDND1-222ENST00000510545 MRAPQ8TCY5 172 aa11.05□□□□□ -0.64
CLDND1-222ENST00000510545 WFDC2Q14508 124 aa11.05□□□□□ -0.64
CLDND1-222ENST00000510545 SS18Q15532 418 aa11.05□□□□□ -0.64
CLDND1-222ENST00000510545 COX7B2Q8TF08 81 aa11.05□□□□□ -0.64
CLDND1-222ENST00000510545 TOMM7Q9P0U1 55 aa11.05□□□□□ -0.64
CLDND1-222ENST00000510545 A0A0U1RRA0 63 aa11.04□□□□□ -0.64
CLDND1-222ENST00000510545 TSPAN13O95857 204 aa11.04□□□□□ -0.64
CLDND1-222ENST00000510545 DEFB121Q5J5C9 76 aa11.04□□□□□ -0.64
CLDND1-222ENST00000510545 C11orf45Q8TAV5 145 aa11.04□□□□□ -0.64
CLDND1-222ENST00000510545 H3BNG1 76 aa11.03□□□□□ -0.64
CLDND1-222ENST00000510545 REG3AQ06141 175 aa11.03□□□□□ -0.64
CLDND1-222ENST00000510545 TM2D3Q9BRN9 247 aa11.03□□□□□ -0.64
CLDND1-222ENST00000510545 IGLV10-54A0A075B6I4 117 aa11.02□□□□□ -0.64
CLDND1-222ENST00000510545 SPATA25Q9BR10 227 aa11.02□□□□□ -0.64
CLDND1-222ENST00000510545 DEFB131BA0A096LNP1 70 aa11.01□□□□□ -0.65
CLDND1-222ENST00000510545 SFTA2Q6UW10 78 aa11.01□□□□□ -0.65
CLDND1-222ENST00000510545 MTURNQ8N3F0 131 aa11.01□□□□□ -0.65
CLDND1-222ENST00000510545 CHCHD10Q8WYQ3 142 aaPredicted RBP11□□□□□ -0.65
CLDND1-222ENST00000510545 PRO1854Q9UHT4 67 aa11□□□□□ -0.65
CLDND1-222ENST00000510545 PRO0461Q9UI25 63 aa11□□□□□ -0.65
CLDND1-222ENST00000510545 HERV-K104P63124 156 aa11□□□□□ -0.65
CLDND1-222ENST00000510545 CIRBPQ14011 172 aaKnown RBP11□□□□□ -0.65
CLDND1-222ENST00000510545 MEIG1Q5JSS6 88 aa11□□□□□ -0.65
CLDND1-222ENST00000510545 A0A0B4J2C4 111 aa10.99□□□□□ -0.65
CLDND1-222ENST00000510545 SOSTDC1Q6X4U4 206 aa10.99□□□□□ -0.65
CLDND1-222ENST00000510545 ETDBQ3ZM63 59 aa10.99□□□□□ -0.65
CLDND1-222ENST00000510545 CD164L2Q6UWJ8 174 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms