RNA–Protein interactions for RNA: ENST00000509407.5

SPARCL1-206, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-206ENST00000509407 PPP1R17O96001 155 aa2.91□□□□□ -1.94
SPARCL1-206ENST00000509407 PDE6HQ13956 83 aa2.91□□□□□ -1.94
SPARCL1-206ENST00000509407 KPRPQ5T749 579 aaPredicted RBP2.91□□□□□ -1.94
SPARCL1-206ENST00000509407 FAM74A4Q5TZK3 123 aa2.91□□□□□ -1.94
SPARCL1-206ENST00000509407 NCBP2-AS2Q69YL0 99 aa2.91□□□□□ -1.94
SPARCL1-206ENST00000509407 SDK2Q58EX2 2172 aa2.91□□□□□ -1.94
SPARCL1-206ENST00000509407 NOTCH3Q9UM47 2321 aa2.91□□□□□ -1.94
SPARCL1-206ENST00000509407 MED13Q9UHV7 2174 aa2.9□□□□□ -1.94
SPARCL1-206ENST00000509407 HTTP42858 3142 aa2.9□□□□□ -1.95
SPARCL1-206ENST00000509407 A0A0J9YY99 117 aa2.9□□□□□ -1.95
SPARCL1-206ENST00000509407 LINC01549A6NIU2 74 aa2.9□□□□□ -1.95
SPARCL1-206ENST00000509407 C10orf142B7Z368 130 aa2.9□□□□□ -1.95
SPARCL1-206ENST00000509407 HCRTO43612 131 aa2.9□□□□□ -1.95
SPARCL1-206ENST00000509407 IGHV3-30P01768 117 aa2.9□□□□□ -1.95
SPARCL1-206ENST00000509407 IGHV3-30-5P0DP03 117 aa2.9□□□□□ -1.95
SPARCL1-206ENST00000509407 CNBPP62633 177 aaKnown RBP2.9□□□□□ -1.95
SPARCL1-206ENST00000509407 C9orf163Q8N9P6 203 aa2.9□□□□□ -1.95
SPARCL1-206ENST00000509407 PRR15LQ9BU68 103 aa2.9□□□□□ -1.95
SPARCL1-206ENST00000509407 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
SPARCL1-206ENST00000509407 PSORS1C2Q9UIG4 136 aa2.9□□□□□ -1.95
SPARCL1-206ENST00000509407 LRRC37A2A6NM11 1700 aa2.9□□□□□ -1.95
SPARCL1-206ENST00000509407 SIP14410 1827 aa2.89□□□□□ -1.95
SPARCL1-206ENST00000509407 ZNF861PO60384 105 aa2.89□□□□□ -1.95
SPARCL1-206ENST00000509407 SPINT4Q6UDR6 99 aa2.89□□□□□ -1.95
SPARCL1-206ENST00000509407 Q9BRP9 147 aa2.89□□□□□ -1.95
SPARCL1-206ENST00000509407 CMC2Q9NRP2 79 aa2.89□□□□□ -1.95
SPARCL1-206ENST00000509407 MPDZO75970 2070 aa2.89□□□□□ -1.95
SPARCL1-206ENST00000509407 CLPSL1A2RUU4 121 aa2.88□□□□□ -1.95
SPARCL1-206ENST00000509407 ZGRF1Q86YA3 2104 aa2.88□□□□□ -1.95
SPARCL1-206ENST00000509407 HEATR1Q9H583 2144 aaKnown RBP2.88□□□□□ -1.95
SPARCL1-206ENST00000509407 PRR34Q9NV39 138 aa2.88□□□□□ -1.95
SPARCL1-206ENST00000509407 KIF25-AS1Q9Y6Z4 181 aa2.88□□□□□ -1.95
SPARCL1-206ENST00000509407 R4GMQ9 66 aa2.88□□□□□ -1.95
SPARCL1-206ENST00000509407 HEATR5BQ9P2D3 2071 aa2.88□□□□□ -1.95
SPARCL1-206ENST00000509407 MKI67P46013 3256 aaKnown RBP2.87□□□□□ -1.95
SPARCL1-206ENST00000509407 TRBV7-4A0A0J9YYF1 115 aa2.87□□□□□ -1.95
SPARCL1-206ENST00000509407 TRBV6-5A0A0K0K1A5 114 aa2.87□□□□□ -1.95
SPARCL1-206ENST00000509407 TRBV30A0A0K0K1B3 111 aa2.87□□□□□ -1.95
SPARCL1-206ENST00000509407 S100A3P33764 101 aa2.87□□□□□ -1.95
SPARCL1-206ENST00000509407 GDF5OSQ5U4N7 250 aa2.87□□□□□ -1.95
SPARCL1-206ENST00000509407 PRO3102Q9H379 93 aa2.87□□□□□ -1.95
SPARCL1-206ENST00000509407 ABRACLQ9P1F3 81 aa2.87□□□□□ -1.95
SPARCL1-206ENST00000509407 SNURFQ9Y675 71 aa2.87□□□□□ -1.95
SPARCL1-206ENST00000509407 DNAH12Q6ZR08 3092 aa2.87□□□□□ -1.95
SPARCL1-206ENST00000509407 BAZ2BQ9UIF8 2168 aaKnown RBP2.86□□□□□ -1.95
SPARCL1-206ENST00000509407 IGKV3-7A0A075B6H7 116 aa2.86□□□□□ -1.95
SPARCL1-206ENST00000509407 IGKV3D-15A0A087WSY6 115 aa2.86□□□□□ -1.95
SPARCL1-206ENST00000509407 F8VRH5 84 aa2.86□□□□□ -1.95
SPARCL1-206ENST00000509407 KRTAP5-9P26371 169 aa2.86□□□□□ -1.95
SPARCL1-206ENST00000509407 CD52P31358 61 aa2.86□□□□□ -1.95
SPARCL1-206ENST00000509407 DEFB103AP81534 67 aa2.86□□□□□ -1.95
SPARCL1-206ENST00000509407 C14orf177Q52M58 125 aa2.86□□□□□ -1.95
SPARCL1-206ENST00000509407 Q6ZTI0 123 aa2.86□□□□□ -1.95
SPARCL1-206ENST00000509407 CYYR1Q96J86 154 aa2.86□□□□□ -1.95
SPARCL1-206ENST00000509407 TXNDC17Q9BRA2 123 aa2.86□□□□□ -1.95
SPARCL1-206ENST00000509407 GFRA4Q9GZZ7 299 aa2.86□□□□□ -1.95
SPARCL1-206ENST00000509407 BRCA2P51587 3418 aa2.86□□□□□ -1.95
SPARCL1-206ENST00000509407 SHROOM3Q8TF72 1996 aa2.85□□□□□ -1.95
SPARCL1-206ENST00000509407 A0A1B0GUT8 65 aa2.85□□□□□ -1.95
SPARCL1-206ENST00000509407 A0A1B0GVY2 172 aa2.85□□□□□ -1.95
SPARCL1-206ENST00000509407 DNAL4O96015 105 aa2.85□□□□□ -1.95
SPARCL1-206ENST00000509407 PPYP01298 95 aa2.85□□□□□ -1.95
SPARCL1-206ENST00000509407 PRO2289Q9P1D8 64 aa2.85□□□□□ -1.95
SPARCL1-206ENST00000509407 COL27A1Q8IZC6 1860 aaPredicted RBP2.84□□□□□ -1.95
SPARCL1-206ENST00000509407 NDUFB1O75438 58 aa2.84□□□□□ -1.95
SPARCL1-206ENST00000509407 IGKV1-17P01599 117 aa2.84□□□□□ -1.95
SPARCL1-206ENST00000509407 HMGA1P17096 107 aaKnown RBP2.84□□□□□ -1.95
SPARCL1-206ENST00000509407 COX7B2Q8TF08 81 aa2.84□□□□□ -1.95
SPARCL1-206ENST00000509407 PATE1Q8WXA2 126 aa2.84□□□□□ -1.95
SPARCL1-206ENST00000509407 LINC01558Q9Y6Z2 57 aa2.84□□□□□ -1.95
SPARCL1-206ENST00000509407 R4GN34 69 aa2.84□□□□□ -1.95
SPARCL1-206ENST00000509407 ANKRD36A6QL64 1941 aa2.83□□□□□ -1.96
SPARCL1-206ENST00000509407 COL4A4P53420 1690 aaPredicted RBP2.83□□□□□ -1.96
SPARCL1-206ENST00000509407 CTSGP08311 255 aa2.83□□□□□ -1.96
SPARCL1-206ENST00000509407 CCL3L1P16619 93 aa2.83□□□□□ -1.96
SPARCL1-206ENST00000509407 FCER1GP30273 86 aa2.83□□□□□ -1.96
SPARCL1-206ENST00000509407 KRTAP10-3P60369 221 aa2.83□□□□□ -1.96
SPARCL1-206ENST00000509407 LY6EQ16553 131 aa2.83□□□□□ -1.96
SPARCL1-206ENST00000509407 ZNF563Q8TA94 476 aa2.83□□□□□ -1.96
SPARCL1-206ENST00000509407 PI4KAP42356 2102 aa2.83□□□□□ -1.96
SPARCL1-206ENST00000509407 MYO7AQ13402 2215 aa2.83□□□□□ -1.96
SPARCL1-206ENST00000509407 A0A087WVE0 104 aa2.82□□□□□ -1.96
SPARCL1-206ENST00000509407 IGKV3D-7A0A0C4DH55 119 aa2.82□□□□□ -1.96
SPARCL1-206ENST00000509407 A0A1W2PNU3 283 aaPredicted RBP2.82□□□□□ -1.96
SPARCL1-206ENST00000509407 M0R3E3 92 aa2.82□□□□□ -1.96
SPARCL1-206ENST00000509407 IFI6P09912 130 aa2.82□□□□□ -1.96
SPARCL1-206ENST00000509407 RANBP2P49792 3224 aaKnown RBP2.81□□□□□ -1.96
SPARCL1-206ENST00000509407 CUL9Q8IWT3 2517 aa2.81□□□□□ -1.96
SPARCL1-206ENST00000509407 UQCR11O14957 56 aa2.81□□□□□ -1.96
SPARCL1-206ENST00000509407 IL9P15248 144 aa2.81□□□□□ -1.96
SPARCL1-206ENST00000509407 PDE6GP18545 87 aa2.81□□□□□ -1.96
SPARCL1-206ENST00000509407 LINC00612Q8N6U2 182 aa2.81□□□□□ -1.96
SPARCL1-206ENST00000509407 FDCSPQ8NFU4 85 aa2.81□□□□□ -1.96
SPARCL1-206ENST00000509407 LINC00846Q9NV44 126 aa2.81□□□□□ -1.96
SPARCL1-206ENST00000509407 MDC1Q14676 2089 aaKnown RBP2.81□□□□□ -1.96
SPARCL1-206ENST00000509407 SPTBP11277 2137 aa2.81□□□□□ -1.96
SPARCL1-206ENST00000509407 PRRC2BQ5JSZ5 2229 aaKnown RBP2.81□□□□□ -1.96
SPARCL1-206ENST00000509407 M0R135 149 aa2.8□□□□□ -1.96
SPARCL1-206ENST00000509407 MGPP08493 103 aa2.8□□□□□ -1.96
SPARCL1-206ENST00000509407 CCL18P55774 89 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms