RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 IBA57-AS1B1ANH7 110 aa9.73□□□□□ -0.85
HMGCL-208ENST00000509389 SMR3BP02814 79 aaPredicted RBP9.73□□□□□ -0.85
HMGCL-208ENST00000509389 CST9LQ9H4G1 147 aa9.73□□□□□ -0.85
HMGCL-208ENST00000509389 VPS13BQ7Z7G8 4022 aa9.73□□□□□ -0.85
HMGCL-208ENST00000509389 IGLV4-69A0A075B6H9 119 aa9.72□□□□□ -0.85
HMGCL-208ENST00000509389 IGLV5-52A0A0A0MRZ9 124 aa9.72□□□□□ -0.85
HMGCL-208ENST00000509389 PRSS1P07477 247 aa9.72□□□□□ -0.85
HMGCL-208ENST00000509389 FAM19A3Q7Z5A8 133 aa9.72□□□□□ -0.85
HMGCL-208ENST00000509389 OPRPNQ99935 248 aaPredicted RBP9.72□□□□□ -0.85
HMGCL-208ENST00000509389 CDC42SE2Q9NRR3 84 aa9.72□□□□□ -0.85
HMGCL-208ENST00000509389 HAMPP81172 84 aa9.71□□□□□ -0.86
HMGCL-208ENST00000509389 NTN5Q8WTR8 489 aaPredicted RBP9.71□□□□□ -0.86
HMGCL-208ENST00000509389 Q9HAA7 133 aa9.71□□□□□ -0.86
HMGCL-208ENST00000509389 MRPL35Q9NZE8 188 aaKnown RBP9.71□□□□□ -0.86
HMGCL-208ENST00000509389 FLG2Q5D862 2391 aaPredicted RBP9.71□□□□□ -0.86
HMGCL-208ENST00000509389 UBE2L6O14933 153 aa9.7□□□□□ -0.86
HMGCL-208ENST00000509389 IGHV3-30P01768 117 aa9.7□□□□□ -0.86
HMGCL-208ENST00000509389 IGHV3-33P01772 117 aa9.7□□□□□ -0.86
HMGCL-208ENST00000509389 IGLC3P0DOY3 106 aa9.7□□□□□ -0.86
HMGCL-208ENST00000509389 IGHV3-30-3P0DP02 117 aa9.7□□□□□ -0.86
HMGCL-208ENST00000509389 IGHV3-30-5P0DP03 117 aa9.7□□□□□ -0.86
HMGCL-208ENST00000509389 PKIAP61925 76 aa9.7□□□□□ -0.86
HMGCL-208ENST00000509389 SRRM2Q9UQ35 2752 aaKnown RBP9.69□□□□□ -0.86
HMGCL-208ENST00000509389 H0Y8G0 127 aa9.69□□□□□ -0.86
HMGCL-208ENST00000509389 DPM2O94777 84 aa9.69□□□□□ -0.86
HMGCL-208ENST00000509389 PLNP26678 52 aa9.69□□□□□ -0.86
HMGCL-208ENST00000509389 ZC2HC1BQ5TFG8 222 aa9.69□□□□□ -0.86
HMGCL-208ENST00000509389 Q8N814 137 aa9.69□□□□□ -0.86
HMGCL-208ENST00000509389 OR5A1Q8NGJ0 315 aa9.69□□□□□ -0.86
HMGCL-208ENST00000509389 PMCHL2Q9BQD1 86 aa9.69□□□□□ -0.86
HMGCL-208ENST00000509389 CHCHD5Q9BSY4 110 aa9.69□□□□□ -0.86
HMGCL-208ENST00000509389 CHTOPQ9Y3Y2 248 aaKnown RBP9.69□□□□□ -0.86
HMGCL-208ENST00000509389 IGLV4-60A0A075B6I1 120 aa9.68□□□□□ -0.86
HMGCL-208ENST00000509389 UBE2D1P51668 147 aa9.68□□□□□ -0.86
HMGCL-208ENST00000509389 GAGE6Q13070 117 aa9.68□□□□□ -0.86
HMGCL-208ENST00000509389 MPV17L2Q567V2 206 aa9.68□□□□□ -0.86
HMGCL-208ENST00000509389 ZNF664Q8N3J9 261 aa9.68□□□□□ -0.86
HMGCL-208ENST00000509389 VCX2Q9H322 139 aa9.68□□□□□ -0.86
HMGCL-208ENST00000509389 MYCBP2O75592 4640 aa9.67□□□□□ -0.86
HMGCL-208ENST00000509389 DNAH8Q96JB1 4490 aa9.67□□□□□ -0.86
HMGCL-208ENST00000509389 FAM229AH3BQW9 127 aa9.67□□□□□ -0.86
HMGCL-208ENST00000509389 IGKCP01834 107 aa9.67□□□□□ -0.86
HMGCL-208ENST00000509389 RBX1P62877 108 aa9.67□□□□□ -0.86
HMGCL-208ENST00000509389 AMMECR1LQ6DCA0 310 aa9.67□□□□□ -0.86
HMGCL-208ENST00000509389 C11orf86A6NJI1 115 aa9.66□□□□□ -0.86
HMGCL-208ENST00000509389 ATOH7Q8N100 152 aa9.66□□□□□ -0.86
HMGCL-208ENST00000509389 TMEM101Q96IK0 257 aa9.66□□□□□ -0.86
HMGCL-208ENST00000509389 IGLV5-45A0A087WSX0 123 aa9.65□□□□□ -0.86
HMGCL-208ENST00000509389 RNASE13Q5GAN3 156 aaKnown RBP9.65□□□□□ -0.86
HMGCL-208ENST00000509389 DGAT2L7PQ6IED9 249 aa9.65□□□□□ -0.86
HMGCL-208ENST00000509389 Q8N3U1 123 aa9.65□□□□□ -0.86
HMGCL-208ENST00000509389 C2orf88Q9BSF0 95 aa9.65□□□□□ -0.86
HMGCL-208ENST00000509389 VAMP8Q9BV40 100 aa9.65□□□□□ -0.86
HMGCL-208ENST00000509389 FAM30AQ9NZY2 134 aa9.65□□□□□ -0.86
HMGCL-208ENST00000509389 TINCRA0A1B0GVN0 87 aa9.64□□□□□ -0.87
HMGCL-208ENST00000509389 WFDC2Q14508 124 aa9.64□□□□□ -0.87
HMGCL-208ENST00000509389 MAJINQ3KP22 176 aa9.64□□□□□ -0.87
HMGCL-208ENST00000509389 TM2D2Q9BX73 214 aa9.64□□□□□ -0.87
HMGCL-208ENST00000509389 S100A12P80511 92 aa9.63□□□□□ -0.87
HMGCL-208ENST00000509389 CHAC1Q9BUX1 264 aa9.63□□□□□ -0.87
HMGCL-208ENST00000509389 PRR34Q9NV39 138 aa9.63□□□□□ -0.87
HMGCL-208ENST00000509389 A0A0J9YXV3 536 aa9.63□□□□□ -0.87
HMGCL-208ENST00000509389 hDV102S1A0JD36 115 aa9.63□□□□□ -0.87
HMGCL-208ENST00000509389 ZNF22P17026 224 aaPredicted RBP9.63□□□□□ -0.87
HMGCL-208ENST00000509389 ANKRD39Q53RE8 183 aa9.63□□□□□ -0.87
HMGCL-208ENST00000509389 LINC00242Q5T6M2 205 aa9.63□□□□□ -0.87
HMGCL-208ENST00000509389 PAM16Q9Y3D7 125 aa9.63□□□□□ -0.87
HMGCL-208ENST00000509389 TRAV8-3A0A0A6YYJ7 113 aa9.61□□□□□ -0.87
HMGCL-208ENST00000509389 LECT2O14960 151 aa9.61□□□□□ -0.87
HMGCL-208ENST00000509389 CCL25O15444 150 aa9.61□□□□□ -0.87
HMGCL-208ENST00000509389 SEC11AP67812 179 aa9.61□□□□□ -0.87
HMGCL-208ENST00000509389 SPATA45Q537H7 98 aa9.61□□□□□ -0.87
HMGCL-208ENST00000509389 HERVK_113P63121 156 aa9.6□□□□□ -0.87
HMGCL-208ENST00000509389 STPG4Q8N801 248 aa9.6□□□□□ -0.87
HMGCL-208ENST00000509389 LINC00959A0A1B0GUT2 108 aa9.59□□□□□ -0.87
HMGCL-208ENST00000509389 TMEM223A0PJW6 202 aa9.59□□□□□ -0.87
HMGCL-208ENST00000509389 E9PLD3 99 aa9.59□□□□□ -0.87
HMGCL-208ENST00000509389 TMEM262E9PQX1 116 aa9.59□□□□□ -0.87
HMGCL-208ENST00000509389 Q6ZSA8 131 aa9.59□□□□□ -0.87
HMGCL-208ENST00000509389 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.58□□□□□ -0.88
HMGCL-208ENST00000509389 IGKV2D-26A0A0A0MRZ7 120 aa9.58□□□□□ -0.88
HMGCL-208ENST00000509389 IGHV3OR16-9A0A0B4J2B5 98 aa9.58□□□□□ -0.88
HMGCL-208ENST00000509389 HSBP1L1C9JCN9 74 aa9.58□□□□□ -0.88
HMGCL-208ENST00000509389 COX6A2Q02221 97 aa9.57□□□□□ -0.88
HMGCL-208ENST00000509389 REG3AQ06141 175 aa9.57□□□□□ -0.88
HMGCL-208ENST00000509389 TRAV13-1A0A0B4J241 112 aa9.56□□□□□ -0.88
HMGCL-208ENST00000509389 ANGP03950 147 aaKnown RBP9.56□□□□□ -0.88
HMGCL-208ENST00000509389 LINC00269Q8N2A0 174 aa9.56□□□□□ -0.88
HMGCL-208ENST00000509389 CDKN2A-AS1Q9UH64 79 aa9.56□□□□□ -0.88
HMGCL-208ENST00000509389 COX11Q9Y6N1 276 aa9.56□□□□□ -0.88
HMGCL-208ENST00000509389 IGLV5-39A0A0G2JS06 123 aa9.55□□□□□ -0.88
HMGCL-208ENST00000509389 DLEU1O43261 78 aa9.55□□□□□ -0.88
HMGCL-208ENST00000509389 PLA2G1BP04054 148 aaKnown RBP9.55□□□□□ -0.88
HMGCL-208ENST00000509389 COX8AP10176 69 aa9.55□□□□□ -0.88
HMGCL-208ENST00000509389 LINC01620Q4KN68 170 aa9.55□□□□□ -0.88
HMGCL-208ENST00000509389 TMEM170BQ5T4T1 132 aa9.55□□□□□ -0.88
HMGCL-208ENST00000509389 ENHOQ6UWT2 76 aa9.55□□□□□ -0.88
HMGCL-208ENST00000509389 LINC00528Q8N1L1 170 aa9.55□□□□□ -0.88
HMGCL-208ENST00000509389 LINC01561Q8N1V8 128 aa9.55□□□□□ -0.88
HMGCL-208ENST00000509389 RMI2Q96E14 147 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms