RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 RYR2Q92736 4967 aa3.68□□□□□ -1.82
HMGB1P44-201ENST00000508597 TRAV8-4A0A0B4J246 113 aa3.68□□□□□ -1.82
HMGB1P44-201ENST00000508597 CRPP02741 224 aa3.68□□□□□ -1.82
HMGB1P44-201ENST00000508597 ANGP03950 147 aaKnown RBP3.68□□□□□ -1.82
HMGB1P44-201ENST00000508597 MRPS36P82909 103 aaKnown RBP3.68□□□□□ -1.82
HMGB1P44-201ENST00000508597 MIAQ16674 131 aa3.68□□□□□ -1.82
HMGB1P44-201ENST00000508597 MPV17L2Q567V2 206 aa3.68□□□□□ -1.82
HMGB1P44-201ENST00000508597 C1orf134Q5TEV5 83 aa3.68□□□□□ -1.82
HMGB1P44-201ENST00000508597 RNASEKQ6P5S7 137 aaKnown RBP3.68□□□□□ -1.82
HMGB1P44-201ENST00000508597 C6orf223Q8N319 242 aa3.68□□□□□ -1.82
HMGB1P44-201ENST00000508597 STPG4Q8N801 248 aa3.68□□□□□ -1.82
HMGB1P44-201ENST00000508597 OR5A1Q8NGJ0 315 aa3.68□□□□□ -1.82
HMGB1P44-201ENST00000508597 PRR34Q9NV39 138 aa3.68□□□□□ -1.82
HMGB1P44-201ENST00000508597 UBE2D4Q9Y2X8 147 aa3.68□□□□□ -1.82
HMGB1P44-201ENST00000508597 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P44-201ENST00000508597 IGKV2-29A2NJV5 120 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P44-201ENST00000508597 A4D1N5 150 aa3.67□□□□□ -1.82
HMGB1P44-201ENST00000508597 C1orf196B1AJZ1 125 aa3.67□□□□□ -1.82
HMGB1P44-201ENST00000508597 IGHV3-30P01768 117 aa3.67□□□□□ -1.82
HMGB1P44-201ENST00000508597 IGHV3-33P01772 117 aa3.67□□□□□ -1.82
HMGB1P44-201ENST00000508597 IGHV3-30-3P0DP02 117 aa3.67□□□□□ -1.82
HMGB1P44-201ENST00000508597 IGHV3-30-5P0DP03 117 aa3.67□□□□□ -1.82
HMGB1P44-201ENST00000508597 CTAG1AP78358 180 aa3.67□□□□□ -1.82
HMGB1P44-201ENST00000508597 C2orf66Q6UXQ4 117 aa3.67□□□□□ -1.82
HMGB1P44-201ENST00000508597 LINC00336Q6ZUF6 198 aa3.67□□□□□ -1.82
HMGB1P44-201ENST00000508597 BAGE3Q86Y29 109 aa3.67□□□□□ -1.82
HMGB1P44-201ENST00000508597 ZNF664Q8N3J9 261 aa3.67□□□□□ -1.82
HMGB1P44-201ENST00000508597 TOMM6Q96B49 74 aa3.67□□□□□ -1.82
HMGB1P44-201ENST00000508597 TMEM141Q96I45 108 aa3.67□□□□□ -1.82
HMGB1P44-201ENST00000508597 TIMM17AQ99595 171 aa3.67□□□□□ -1.82
HMGB1P44-201ENST00000508597 CDC42SE2Q9NRR3 84 aa3.67□□□□□ -1.82
HMGB1P44-201ENST00000508597 KLK12Q9UKR0 248 aa3.67□□□□□ -1.82
HMGB1P44-201ENST00000508597 HYDINQ4G0P3 5121 aa3.67□□□□□ -1.82
HMGB1P44-201ENST00000508597 FRAS1Q86XX4 4008 aa3.67□□□□□ -1.82
HMGB1P44-201ENST00000508597 IGLV4-60A0A075B6I1 120 aa3.66□□□□□ -1.82
HMGB1P44-201ENST00000508597 SMIM1B2RUZ4 78 aa3.66□□□□□ -1.82
HMGB1P44-201ENST00000508597 M0R2N4 97 aa3.66□□□□□ -1.82
HMGB1P44-201ENST00000508597 HBDP02042 147 aa3.66□□□□□ -1.82
HMGB1P44-201ENST00000508597 PRSS1P07477 247 aa3.66□□□□□ -1.82
HMGB1P44-201ENST00000508597 REG3AQ06141 175 aa3.66□□□□□ -1.82
HMGB1P44-201ENST00000508597 Q6ZN92 141 aa3.66□□□□□ -1.82
HMGB1P44-201ENST00000508597 ERASQ7Z444 233 aa3.66□□□□□ -1.82
HMGB1P44-201ENST00000508597 LINC00269Q8N2A0 174 aa3.66□□□□□ -1.82
HMGB1P44-201ENST00000508597 Q8N976 141 aa3.66□□□□□ -1.82
HMGB1P44-201ENST00000508597 UBE2WQ96B02 151 aa3.66□□□□□ -1.82
HMGB1P44-201ENST00000508597 IGIPA6NJ69 53 aa3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 PSCAO43653 123 aa3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 HIST1H2BKO60814 126 aa3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 HSBP1O75506 76 aa3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 ATP5LO75964 103 aa3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 HIST1H2BJP06899 126 aa3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 HIST1H2BOP23527 126 aa3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 HIST1H2BBP33778 126 aa3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 HIST1H2BDP58876 126 aa3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 HIST1H2BCP62807 126 aa3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 RPL39P62891 51 aaKnown RBP3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 SEC11AP67812 179 aa3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 SS18Q15532 418 aa3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 HIST2H2BEQ16778 126 aa3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 COA6Q5JTJ3 125 aaKnown RBP3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 ENHOQ6UWT2 76 aa3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 TEX43Q6ZNM6 134 aa3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 LINC00518Q8N0U6 118 aa3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 DEFB104AQ8WTQ1 72 aa3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 HIST1H2BHQ93079 126 aa3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 PACRGQ96M98 296 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 SCGB3A1Q96QR1 104 aa3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 HIST1H2BNQ99877 126 aa3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 HIST1H2BMQ99879 126 aa3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 C2orf88Q9BSF0 95 aa3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 VCX2Q9H322 139 aa3.65□□□□□ -1.83
HMGB1P44-201ENST00000508597 IGLV4-3A0A075B6K6 122 aa3.64□□□□□ -1.83
HMGB1P44-201ENST00000508597 IGKV2D-24A0A075B6R9 120 aa3.64□□□□□ -1.83
HMGB1P44-201ENST00000508597 LINC00959A0A1B0GUT2 108 aa3.64□□□□□ -1.83
HMGB1P44-201ENST00000508597 LINC01547P58512 204 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P44-201ENST00000508597 Q6ZRN7 208 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P44-201ENST00000508597 FAM19A3Q7Z5A8 133 aa3.64□□□□□ -1.83
HMGB1P44-201ENST00000508597 AMELXQ99217 191 aa3.64□□□□□ -1.83
HMGB1P44-201ENST00000508597 HECTD4Q9Y4D8 3996 aa3.63□□□□□ -1.83
HMGB1P44-201ENST00000508597 RYR3Q15413 4870 aa3.63□□□□□ -1.83
HMGB1P44-201ENST00000508597 A0A096LNJ9 63 aa3.63□□□□□ -1.83
HMGB1P44-201ENST00000508597 RTL8CO15255 209 aa3.63□□□□□ -1.83
HMGB1P44-201ENST00000508597 SERF1AO75920 110 aa3.63□□□□□ -1.83
HMGB1P44-201ENST00000508597 CDK2AP2O75956 126 aa3.63□□□□□ -1.83
HMGB1P44-201ENST00000508597 SMIM6P0DI80 62 aa3.63□□□□□ -1.83
HMGB1P44-201ENST00000508597 KRTAP10-6P60371 365 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P44-201ENST00000508597 PMVKQ15126 192 aa3.63□□□□□ -1.83
HMGB1P44-201ENST00000508597 C14orf177Q52M58 125 aa3.63□□□□□ -1.83
HMGB1P44-201ENST00000508597 PDZD11Q5EBL8 140 aa3.63□□□□□ -1.83
HMGB1P44-201ENST00000508597 CD164L2Q6UWJ8 174 aa3.63□□□□□ -1.83
HMGB1P44-201ENST00000508597 Q6ZUT4 128 aa3.63□□□□□ -1.83
HMGB1P44-201ENST00000508597 LINC01561Q8N1V8 128 aa3.63□□□□□ -1.83
HMGB1P44-201ENST00000508597 Q9HAA7 133 aa3.63□□□□□ -1.83
HMGB1P44-201ENST00000508597 HSPB8Q9UJY1 196 aa3.63□□□□□ -1.83
HMGB1P44-201ENST00000508597 DNAH17Q9UFH2 4485 aa3.63□□□□□ -1.83
HMGB1P44-201ENST00000508597 TRAV13-1A0A0B4J241 112 aa3.62□□□□□ -1.83
HMGB1P44-201ENST00000508597 TRAV12-1A0A0B4J245 112 aa3.62□□□□□ -1.83
HMGB1P44-201ENST00000508597 LEPROTL1O95214 131 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms