RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 MRPL51Q4U2R6 128 aaKnown RBP2.18□□□□□ -2.06
NEDD4-208ENST00000508342 ANAPC13Q9BS18 74 aa2.18□□□□□ -2.06
NEDD4-208ENST00000508342 PPDPFQ9H3Y8 114 aa2.18□□□□□ -2.06
NEDD4-208ENST00000508342 HELZ2Q9BYK8 2649 aaKnown RBP2.18□□□□□ -2.06
NEDD4-208ENST00000508342 IGLV1-51P01701 117 aa2.18□□□□□ -2.06
NEDD4-208ENST00000508342 COX7BP24311 80 aa2.18□□□□□ -2.06
NEDD4-208ENST00000508342 CIRBP-AS1Q8TBR5 109 aa2.18□□□□□ -2.06
NEDD4-208ENST00000508342 SERP1Q9Y6X1 66 aa2.18□□□□□ -2.06
NEDD4-208ENST00000508342 ITPR3Q14573 2671 aa2.18□□□□□ -2.06
NEDD4-208ENST00000508342 H0YIZ8 118 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 EIF4EBP1Q13541 118 aaPredicted RBP2.17□□□□□ -2.06
NEDD4-208ENST00000508342 ZNF664Q8N3J9 261 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 SMCPP49901 116 aaPredicted RBP2.17□□□□□ -2.06
NEDD4-208ENST00000508342 HRCT1Q6UXD1 115 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 Q6ZTI0 123 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 UPK3BQ9BT76 320 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 RNF126Q9BV68 326 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 PRO1854Q9UHT4 67 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 IGLV9-49A0A0B4J1Y8 123 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 A0A0J9YX75 114 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 C19orf71A6NCJ1 209 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 H3BMG7 143 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 CTRLP40313 264 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 SMIM20Q8N5G0 67 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 MSRB1Q9NZV6 116 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 HYDINQ4G0P3 5121 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 CFAP46Q8IYW2 2715 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 LOC107984640A0A0U1RRK4 108 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 LGALS9BQ3B8N2 356 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 Q6ZTC4 211 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 LHFPL1Q86WI0 220 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 CHCHD10Q8WYQ3 142 aaPredicted RBP2.17□□□□□ -2.06
NEDD4-208ENST00000508342 IGHV3OR16-9A0A0B4J2B5 98 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 MAPKAPK5-AS1Q8N8E1 139 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 ASPMQ8IZT6 3477 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 E9PLD3 99 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 SYS1-DBNDD2H3BUS1 97 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 BAALC-AS2P0C853 105 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 Q6ZRM9 215 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 Q6ZVQ6 151 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 YPEL4Q96NS1 127 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 XAGE1AQ9HD64 81 aa2.17□□□□□ -2.06
NEDD4-208ENST00000508342 COL6A3P12111 3177 aa2.16□□□□□ -2.06
NEDD4-208ENST00000508342 PLAC8L1A1L4L8 177 aa2.16□□□□□ -2.06
NEDD4-208ENST00000508342 K7EIM0 57 aa2.16□□□□□ -2.06
NEDD4-208ENST00000508342 IFITM1P13164 125 aa2.16□□□□□ -2.06
NEDD4-208ENST00000508342 EBI3Q14213 229 aa2.16□□□□□ -2.06
NEDD4-208ENST00000508342 HIST1H2BLQ99880 126 aa2.16□□□□□ -2.06
NEDD4-208ENST00000508342 MYO15AQ9UKN7 3530 aa2.16□□□□□ -2.06
NEDD4-208ENST00000508342 DNAH14Q0VDD8 3507 aa2.16□□□□□ -2.06
NEDD4-208ENST00000508342 TRBV6-1A0A0K0K1D8 114 aa2.16□□□□□ -2.06
NEDD4-208ENST00000508342 K7EP34 96 aa2.16□□□□□ -2.06
NEDD4-208ENST00000508342 REG3GQ6UW15 175 aa2.16□□□□□ -2.06
NEDD4-208ENST00000508342 BSNQ9UPA5 3926 aa2.16□□□□□ -2.06
NEDD4-208ENST00000508342 IGLV4-69A0A075B6H9 119 aa2.16□□□□□ -2.06
NEDD4-208ENST00000508342 SMIM26A0A096LP01 95 aa2.16□□□□□ -2.06
NEDD4-208ENST00000508342 SPTSSBQ8NFR3 76 aa2.16□□□□□ -2.06
NEDD4-208ENST00000508342 MRPL35Q9NZE8 188 aaKnown RBP2.16□□□□□ -2.06
NEDD4-208ENST00000508342 LELP1Q5T871 98 aa2.16□□□□□ -2.06
NEDD4-208ENST00000508342 Q8N6K4 173 aa2.16□□□□□ -2.06
NEDD4-208ENST00000508342 A0A096LNT2 108 aa2.16□□□□□ -2.06
NEDD4-208ENST00000508342 HIGD1BQ9P298 99 aa2.16□□□□□ -2.06
NEDD4-208ENST00000508342 TMEM256-PLSCR3K7ERE1 68 aa2.15□□□□□ -2.06
NEDD4-208ENST00000508342 IGLC2P0DOY2 106 aa2.15□□□□□ -2.06
NEDD4-208ENST00000508342 IGLC3P0DOY3 106 aa2.15□□□□□ -2.06
NEDD4-208ENST00000508342 PDE6GP18545 87 aa2.15□□□□□ -2.06
NEDD4-208ENST00000508342 COX6B2Q6YFQ2 88 aa2.15□□□□□ -2.06
NEDD4-208ENST00000508342 MIR7-3HGQ8N6C7 128 aa2.15□□□□□ -2.06
NEDD4-208ENST00000508342 C1orf147Q96MC9 270 aaPredicted RBP2.15□□□□□ -2.06
NEDD4-208ENST00000508342 NAA38Q9BRA0 125 aaKnown RBP2.15□□□□□ -2.06
NEDD4-208ENST00000508342 JMJD7-PLA2G4BH0Y9G9 81 aa2.15□□□□□ -2.06
NEDD4-208ENST00000508342 IGLV2-14P01704 120 aa2.15□□□□□ -2.06
NEDD4-208ENST00000508342 Q5BKY6 102 aa2.15□□□□□ -2.06
NEDD4-208ENST00000508342 BPY2O14599 106 aa2.15□□□□□ -2.07
NEDD4-208ENST00000508342 C3orf22Q8N5N4 141 aa2.15□□□□□ -2.07
NEDD4-208ENST00000508342 TRBV7-7A0A0K0K1E9 115 aa2.15□□□□□ -2.07
NEDD4-208ENST00000508342 Q6ZVH6 145 aa2.15□□□□□ -2.07
NEDD4-208ENST00000508342 FXYD5Q96DB9 178 aa2.15□□□□□ -2.07
NEDD4-208ENST00000508342 RPL39LQ96EH5 51 aaKnown RBP2.15□□□□□ -2.07
NEDD4-208ENST00000508342 A0A0J9YXV3 536 aa2.15□□□□□ -2.07
NEDD4-208ENST00000508342 NDUFC1O43677 76 aa2.15□□□□□ -2.07
NEDD4-208ENST00000508342 LINC01556Q5JQF7 62 aa2.15□□□□□ -2.07
NEDD4-208ENST00000508342 Q6ZSR3 168 aa2.15□□□□□ -2.07
NEDD4-208ENST00000508342 ZFAND2AQ8N6M9 145 aa2.15□□□□□ -2.07
NEDD4-208ENST00000508342 COL6A5A8TX70 2615 aa2.15□□□□□ -2.07
NEDD4-208ENST00000508342 IGKV2-28A0A075B6P5 120 aa2.15□□□□□ -2.07
NEDD4-208ENST00000508342 TRBV6-8A0A0A6YYG3 113 aa2.15□□□□□ -2.07
NEDD4-208ENST00000508342 LOC100131303A0A0U1RQF7 123 aa2.15□□□□□ -2.07
NEDD4-208ENST00000508342 K7EQG2 157 aa2.15□□□□□ -2.07
NEDD4-208ENST00000508342 IGKV2D-28P01615 120 aa2.15□□□□□ -2.07
NEDD4-208ENST00000508342 C1orf137Q5JT78 98 aa2.15□□□□□ -2.07
NEDD4-208ENST00000508342 GDF5OSQ5U4N7 250 aa2.15□□□□□ -2.07
NEDD4-208ENST00000508342 PRR15LQ9BU68 103 aa2.15□□□□□ -2.07
NEDD4-208ENST00000508342 LINC00574Q9H8X3 128 aa2.15□□□□□ -2.07
NEDD4-208ENST00000508342 NPYP01303 97 aa2.14□□□□□ -2.07
NEDD4-208ENST00000508342 CRIP2P52943 208 aaPredicted RBP2.14□□□□□ -2.07
NEDD4-208ENST00000508342 AKAP13Q12802 2813 aa2.14□□□□□ -2.07
NEDD4-208ENST00000508342 TEX49A0A1B0GTD5 131 aa2.14□□□□□ -2.07
NEDD4-208ENST00000508342 SLPIP03973 132 aa2.14□□□□□ -2.07
NEDD4-208ENST00000508342 DEFB1P60022 68 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms