RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 COL4A5P29400 1685 aa1.98□□□□□ -2.09
GYPA-205ENST00000508337 DOCK11Q5JSL3 2073 aa1.98□□□□□ -2.09
GYPA-205ENST00000508337 DOCK2Q92608 1830 aa1.98□□□□□ -2.09
GYPA-205ENST00000508337 ARFGEF3Q5TH69 2177 aa1.98□□□□□ -2.09
GYPA-205ENST00000508337 LTN1O94822 1766 aa1.98□□□□□ -2.09
GYPA-205ENST00000508337 ABCA4P78363 2273 aa1.97□□□□□ -2.09
GYPA-205ENST00000508337 LOC110117498A0A087WWA1 95 aa1.97□□□□□ -2.09
GYPA-205ENST00000508337 Q96NJ1 140 aa1.97□□□□□ -2.09
GYPA-205ENST00000508337 MYO3AQ8NEV4 1616 aa1.97□□□□□ -2.09
GYPA-205ENST00000508337 PI4KAP42356 2102 aa1.97□□□□□ -2.09
GYPA-205ENST00000508337 TCHHQ07283 1943 aa1.97□□□□□ -2.09
GYPA-205ENST00000508337 DLG5Q8TDM6 1919 aa1.97□□□□□ -2.09
GYPA-205ENST00000508337 CUX1P39880 1505 aa1.96□□□□□ -2.09
GYPA-205ENST00000508337 LMTK2Q8IWU2 1503 aa1.96□□□□□ -2.09
GYPA-205ENST00000508337 CTTNBP2Q8WZ74 1663 aa1.96□□□□□ -2.1
GYPA-205ENST00000508337 FREM1Q5H8C1 2179 aa1.96□□□□□ -2.1
GYPA-205ENST00000508337 DOCK10Q96BY6 2186 aa1.96□□□□□ -2.1
GYPA-205ENST00000508337 PTPN23Q9H3S7 1636 aa1.96□□□□□ -2.1
GYPA-205ENST00000508337 CEP192Q8TEP8 1941 aa1.96□□□□□ -2.1
GYPA-205ENST00000508337 ACYP2P14621 99 aa1.96□□□□□ -2.1
GYPA-205ENST00000508337 GDF5OSQ5U4N7 250 aa1.96□□□□□ -2.1
GYPA-205ENST00000508337 ATP5EP2Q5VTU8 51 aa1.96□□□□□ -2.1
GYPA-205ENST00000508337 ALPK2Q86TB3 2170 aa1.96□□□□□ -2.1
GYPA-205ENST00000508337 ABCC2Q92887 1545 aa1.96□□□□□ -2.1
GYPA-205ENST00000508337 CR1P17927 2039 aa1.95□□□□□ -2.1
GYPA-205ENST00000508337 FXYD6-FXYD2A0A087WZ82 144 aa1.95□□□□□ -2.1
GYPA-205ENST00000508337 CAV3P56539 151 aa1.95□□□□□ -2.1
GYPA-205ENST00000508337 KRTAP12-1P59990 96 aa1.95□□□□□ -2.1
GYPA-205ENST00000508337 ATXN8Q156A1 80 aa1.95□□□□□ -2.1
GYPA-205ENST00000508337 KRTAP13-4Q3LI77 160 aa1.95□□□□□ -2.1
GYPA-205ENST00000508337 CCL19Q99731 98 aa1.95□□□□□ -2.1
GYPA-205ENST00000508337 LTBP2Q14767 1821 aa1.95□□□□□ -2.1
GYPA-205ENST00000508337 PPRC1Q5VV67 1664 aaKnown RBP1.95□□□□□ -2.1
GYPA-205ENST00000508337 ASXL1Q8IXJ9 1541 aa1.95□□□□□ -2.1
GYPA-205ENST00000508337 NRXN2Q9P2S2 1712 aa1.94□□□□□ -2.1
GYPA-205ENST00000508337 A0A1B0GUT8 65 aa1.94□□□□□ -2.1
GYPA-205ENST00000508337 SPINK7P58062 85 aa1.94□□□□□ -2.1
GYPA-205ENST00000508337 Q6ZQY7 126 aa1.94□□□□□ -2.1
GYPA-205ENST00000508337 SMIM4Q8WVI0 70 aa1.94□□□□□ -2.1
GYPA-205ENST00000508337 LINC00846Q9NV44 126 aa1.94□□□□□ -2.1
GYPA-205ENST00000508337 TMEM131LA2VDJ0 1609 aa1.94□□□□□ -2.1
GYPA-205ENST00000508337 COL4A2P08572 1712 aa1.94□□□□□ -2.1
GYPA-205ENST00000508337 LRRC9Q6ZRR7 1453 aa1.94□□□□□ -2.1
GYPA-205ENST00000508337 BRWD1Q9NSI6 2320 aa1.94□□□□□ -2.1
GYPA-205ENST00000508337 RTTNQ86VV8 2226 aa1.93□□□□□ -2.1
GYPA-205ENST00000508337 LRRC37A3O60309 1634 aa1.93□□□□□ -2.1
GYPA-205ENST00000508337 IFI6P09912 130 aa1.93□□□□□ -2.1
GYPA-205ENST00000508337 C10orf113Q5VZT2 155 aa1.93□□□□□ -2.1
GYPA-205ENST00000508337 OBSCN-AS1Q96MR7 158 aa1.93□□□□□ -2.1
GYPA-205ENST00000508337 STRCP1A6NGW2 1772 aa1.93□□□□□ -2.1
GYPA-205ENST00000508337 MED12Q93074 2177 aa1.92□□□□□ -2.1
GYPA-205ENST00000508337 SIP14410 1827 aa1.92□□□□□ -2.1
GYPA-205ENST00000508337 TRBV7-4A0A0J9YYF1 115 aa1.92□□□□□ -2.1
GYPA-205ENST00000508337 H0Y9P7 68 aa1.92□□□□□ -2.1
GYPA-205ENST00000508337 HCRTO43612 131 aa1.92□□□□□ -2.1
GYPA-205ENST00000508337 COX17Q14061 63 aa1.92□□□□□ -2.1
GYPA-205ENST00000508337 SPRR4Q96PI1 79 aa1.92□□□□□ -2.1
GYPA-205ENST00000508337 FXYD6Q9H0Q3 95 aa1.92□□□□□ -2.1
GYPA-205ENST00000508337 PRRC2BQ5JSZ5 2229 aaKnown RBP1.92□□□□□ -2.1
GYPA-205ENST00000508337 OTOGLQ3ZCN5 2332 aa1.92□□□□□ -2.1
GYPA-205ENST00000508337 DIP2CQ9Y2E4 1556 aa1.92□□□□□ -2.1
GYPA-205ENST00000508337 ZMYM4Q5VZL5 1548 aa1.91□□□□□ -2.1
GYPA-205ENST00000508337 ZNF142P52746 1687 aaPredicted RBP1.91□□□□□ -2.1
GYPA-205ENST00000508337 SPATA8Q6RVD6 105 aa1.91□□□□□ -2.1
GYPA-205ENST00000508337 SDK1Q7Z5N4 2213 aa1.91□□□□□ -2.1
GYPA-205ENST00000508337 UBR1Q8IWV7 1749 aa1.91□□□□□ -2.1
GYPA-205ENST00000508337 FN1P02751 2386 aaKnown RBP1.91□□□□□ -2.1
GYPA-205ENST00000508337 DLEC1Q9Y238 1755 aa1.9□□□□□ -2.1
GYPA-205ENST00000508337 RREB1Q92766 1687 aa1.9□□□□□ -2.1
GYPA-205ENST00000508337 ARHGEF5Q12774 1597 aa1.9□□□□□ -2.1
GYPA-205ENST00000508337 TET1Q8NFU7 2136 aa1.9□□□□□ -2.1
GYPA-205ENST00000508337 TRAV21A0A0B4J279 112 aa1.9□□□□□ -2.11
GYPA-205ENST00000508337 WFDC9Q8NEX5 89 aa1.9□□□□□ -2.11
GYPA-205ENST00000508337 TMEM263Q8WUH6 116 aaKnown RBP1.9□□□□□ -2.11
GYPA-205ENST00000508337 LINC00472Q9H8W2 130 aa1.9□□□□□ -2.11
GYPA-205ENST00000508337 PLAC8Q9NZF1 115 aa1.9□□□□□ -2.11
GYPA-205ENST00000508337 KNDC1Q76NI1 1749 aa1.9□□□□□ -2.11
GYPA-205ENST00000508337 MYOM1P52179 1685 aa1.9□□□□□ -2.11
GYPA-205ENST00000508337 COL5A3P25940 1745 aaPredicted RBP1.89□□□□□ -2.11
GYPA-205ENST00000508337 MDC1Q14676 2089 aaKnown RBP1.89□□□□□ -2.11
GYPA-205ENST00000508337 AFDNP55196 1824 aaKnown RBP1.89□□□□□ -2.11
GYPA-205ENST00000508337 NKTRP30414 1462 aaKnown RBP1.88□□□□□ -2.11
GYPA-205ENST00000508337 RALGAPBQ86X10 1494 aa1.88□□□□□ -2.11
GYPA-205ENST00000508337 GBF1Q92538 1859 aa1.88□□□□□ -2.11
GYPA-205ENST00000508337 TRBV30A0A0K0K1B3 111 aa1.88□□□□□ -2.11
GYPA-205ENST00000508337 LINC01549A6NIU2 74 aa1.88□□□□□ -2.11
GYPA-205ENST00000508337 DEFB103AP81534 67 aa1.88□□□□□ -2.11
GYPA-205ENST00000508337 DEFB112Q30KQ8 113 aa1.88□□□□□ -2.11
GYPA-205ENST00000508337 ARFGEF1Q9Y6D6 1849 aa1.88□□□□□ -2.11
GYPA-205ENST00000508337 PCDH15Q96QU1 1955 aa1.88□□□□□ -2.11
GYPA-205ENST00000508337 PRXQ9BXM0 1461 aa1.88□□□□□ -2.11
GYPA-205ENST00000508337 BAHCC1Q9P281 2608 aa1.87□□□□□ -2.11
GYPA-205ENST00000508337 RGPD2P0DJD1 1756 aa1.87□□□□□ -2.11
GYPA-205ENST00000508337 NDUFB1O75438 58 aa1.87□□□□□ -2.11
GYPA-205ENST00000508337 HMGA1P17096 107 aaKnown RBP1.87□□□□□ -2.11
GYPA-205ENST00000508337 HAMPP81172 84 aa1.87□□□□□ -2.11
GYPA-205ENST00000508337 NREPQ16612 68 aa1.87□□□□□ -2.11
GYPA-205ENST00000508337 GAFA1Q96PS6 74 aa1.87□□□□□ -2.11
GYPA-205ENST00000508337 RGPD8O14715 1765 aaPredicted RBP1.87□□□□□ -2.11
GYPA-205ENST00000508337 KDM3BQ7LBC6 1761 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms