RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 TPRP12270 2363 aaKnown RBP0.12□□□□□ -2.39
SMN2-208ENST00000508258 PIEZO1Q92508 2521 aa0.12□□□□□ -2.39
SMN2-208ENST00000508258 GAPVD1Q14C86 1478 aa0.12□□□□□ -2.39
SMN2-208ENST00000508258 FAM208BQ5VWN6 2430 aa0.12□□□□□ -2.39
SMN2-208ENST00000508258 CACNA1EQ15878 2313 aa0.12□□□□□ -2.39
SMN2-208ENST00000508258 MYO7AQ13402 2215 aa0.12□□□□□ -2.39
SMN2-208ENST00000508258 M0R3E3 92 aa0.12□□□□□ -2.39
SMN2-208ENST00000508258 TRAPPC2P0DI81 140 aa0.12□□□□□ -2.39
SMN2-208ENST00000508258 TRAPPC2BP0DI82 140 aa0.12□□□□□ -2.39
SMN2-208ENST00000508258 S100A3P33764 101 aa0.12□□□□□ -2.39
SMN2-208ENST00000508258 SEC11AP67812 179 aa0.12□□□□□ -2.39
SMN2-208ENST00000508258 C10orf113Q5VZT2 155 aa0.12□□□□□ -2.39
SMN2-208ENST00000508258 SFTA2Q6UW10 78 aa0.12□□□□□ -2.39
SMN2-208ENST00000508258 Q8IZM0 81 aa0.12□□□□□ -2.39
SMN2-208ENST00000508258 ACBD7Q8N6N7 88 aa0.12□□□□□ -2.39
SMN2-208ENST00000508258 C1orf167Q5SNV9 1468 aa0.11□□□□□ -2.39
SMN2-208ENST00000508258 TEX14Q8IWB6 1497 aa0.11□□□□□ -2.39
SMN2-208ENST00000508258 FYCO1Q9BQS8 1478 aa0.11□□□□□ -2.39
SMN2-208ENST00000508258 MT-ATP8P03928 68 aa0.11□□□□□ -2.39
SMN2-208ENST00000508258 SAA2P0DJI9 122 aaPredicted RBP0.11□□□□□ -2.39
SMN2-208ENST00000508258 S100A10P60903 97 aa0.11□□□□□ -2.39
SMN2-208ENST00000508258 MLH3Q9UHC1 1453 aa0.1□□□□□ -2.39
SMN2-208ENST00000508258 ASXL3Q9C0F0 2248 aa0.1□□□□□ -2.39
SMN2-208ENST00000508258 CHD9Q3L8U1 2897 aa0.1□□□□□ -2.39
SMN2-208ENST00000508258 ANKRD36BQ8N2N9 1353 aa0.1□□□□□ -2.39
SMN2-208ENST00000508258 OTOGQ6ZRI0 2925 aa0.1□□□□□ -2.39
SMN2-208ENST00000508258 GNGT2O14610 69 aa0.1□□□□□ -2.39
SMN2-208ENST00000508258 NDUFC1O43677 76 aa0.1□□□□□ -2.39
SMN2-208ENST00000508258 MPC2O95563 127 aa0.1□□□□□ -2.39
SMN2-208ENST00000508258 UBA52P62987 128 aaKnown RBP0.1□□□□□ -2.39
SMN2-208ENST00000508258 WFDC2Q14508 124 aa0.1□□□□□ -2.39
SMN2-208ENST00000508258 DEFB123Q8N688 67 aa0.1□□□□□ -2.39
SMN2-208ENST00000508258 LINC00846Q9NV44 126 aa0.1□□□□□ -2.39
SMN2-208ENST00000508258 U3KQA8 63 aa0.1□□□□□ -2.39
SMN2-208ENST00000508258 PPRC1Q5VV67 1664 aaKnown RBP0.1□□□□□ -2.39
SMN2-208ENST00000508258 MAST4O15021 2626 aa0.1□□□□□ -2.39
SMN2-208ENST00000508258 XRN1Q8IZH2 1706 aaKnown RBP0.1□□□□□ -2.39
SMN2-208ENST00000508258 ABCC10Q5T3U5 1492 aa0.1□□□□□ -2.39
SMN2-208ENST00000508258 CSMD3Q7Z407 3707 aa0.09□□□□□ -2.39
SMN2-208ENST00000508258 TRBV6-1A0A0K0K1D8 114 aa0.09□□□□□ -2.4
SMN2-208ENST00000508258 A0A1B0GWA3 101 aa0.09□□□□□ -2.4
SMN2-208ENST00000508258 H7BZZ5 65 aa0.09□□□□□ -2.4
SMN2-208ENST00000508258 PIGYQ3MUY2 71 aa0.09□□□□□ -2.4
SMN2-208ENST00000508258 NCMAPQ5T1S8 102 aa0.09□□□□□ -2.4
SMN2-208ENST00000508258 Q5VSD8 79 aa0.09□□□□□ -2.4
SMN2-208ENST00000508258 LCN9Q8WX39 176 aa0.09□□□□□ -2.4
SMN2-208ENST00000508258 LINC01600Q96MT4 127 aa0.09□□□□□ -2.4
SMN2-208ENST00000508258 PRO1933Q9H354 126 aa0.09□□□□□ -2.4
SMN2-208ENST00000508258 CACFD1Q9UGQ2 172 aa0.09□□□□□ -2.4
SMN2-208ENST00000508258 ANKRD26Q9UPS8 1709 aa0.09□□□□□ -2.4
SMN2-208ENST00000508258 NAV2Q8IVL1 2488 aa0.09□□□□□ -2.4
SMN2-208ENST00000508258 A0A0G2JMZ2 1700 aa0.08□□□□□ -2.4
SMN2-208ENST00000508258 TRBV25-1A0A075B6N4 114 aa0.08□□□□□ -2.4
SMN2-208ENST00000508258 A0A0G2JND7 137 aa0.08□□□□□ -2.4
SMN2-208ENST00000508258 TRBV7-4A0A0J9YYF1 115 aa0.08□□□□□ -2.4
SMN2-208ENST00000508258 LINC00959A0A1B0GUT2 108 aa0.08□□□□□ -2.4
SMN2-208ENST00000508258 PMCHL2Q9BQD1 86 aa0.08□□□□□ -2.4
SMN2-208ENST00000508258 DPY30Q9C005 99 aa0.08□□□□□ -2.4
SMN2-208ENST00000508258 AP4S1Q9Y587 144 aa0.08□□□□□ -2.4
SMN2-208ENST00000508258 POLA1P09884 1462 aaPredicted RBP0.08□□□□□ -2.4
SMN2-208ENST00000508258 PLEKHH2Q8IVE3 1493 aa0.08□□□□□ -2.4
SMN2-208ENST00000508258 NLRP1Q9C000 1473 aa0.08□□□□□ -2.4
SMN2-208ENST00000508258 CACNA1CQ13936 2221 aa0.07□□□□□ -2.4
SMN2-208ENST00000508258 A0A087WVE0 104 aa0.07□□□□□ -2.4
SMN2-208ENST00000508258 M0R143 59 aa0.07□□□□□ -2.4
SMN2-208ENST00000508258 ATOX1O00244 68 aa0.07□□□□□ -2.4
SMN2-208ENST00000508258 CFDP00746 253 aaPredicted RBP0.07□□□□□ -2.4
SMN2-208ENST00000508258 S100A8P05109 93 aa0.07□□□□□ -2.4
SMN2-208ENST00000508258 LINC00032P0C843 101 aa0.07□□□□□ -2.4
SMN2-208ENST00000508258 SPRR1AP35321 89 aa0.07□□□□□ -2.4
SMN2-208ENST00000508258 SERP2Q8N6R1 65 aa0.07□□□□□ -2.4
SMN2-208ENST00000508258 TRGV9Q99603 122 aa0.07□□□□□ -2.4
SMN2-208ENST00000508258 KMT2DO14686 5537 aa0.07□□□□□ -2.4
SMN2-208ENST00000508258 NRXN1Q9ULB1 1477 aa0.07□□□□□ -2.4
SMN2-208ENST00000508258 PDCD11Q14690 1871 aaKnown RBP0.07□□□□□ -2.4
SMN2-208ENST00000508258 MARF1Q9Y4F3 1742 aaKnown RBP0.07□□□□□ -2.4
SMN2-208ENST00000508258 CCNB3Q8WWL7 1395 aa0.06□□□□□ -2.4
SMN2-208ENST00000508258 AKAP12Q02952 1782 aa0.06□□□□□ -2.4
SMN2-208ENST00000508258 PAPPA2Q9BXP8 1791 aa0.06□□□□□ -2.4
SMN2-208ENST00000508258 KIAA0556O60303 1618 aa0.06□□□□□ -2.4
SMN2-208ENST00000508258 TARBP1Q13395 1621 aaKnown RBP0.06□□□□□ -2.4
SMN2-208ENST00000508258 TROQ12816 1431 aaPredicted RBP0.06□□□□□ -2.4
SMN2-208ENST00000508258 HRNRQ86YZ3 2850 aaPredicted RBP0.06□□□□□ -2.4
SMN2-208ENST00000508258 SHPRHQ149N8 1683 aa0.06□□□□□ -2.4
SMN2-208ENST00000508258 ZFYVE26Q68DK2 2539 aa0.06□□□□□ -2.4
SMN2-208ENST00000508258 RAPGEF2Q9Y4G8 1499 aa0.06□□□□□ -2.4
SMN2-208ENST00000508258 TRBV7-7A0A0K0K1E9 115 aa0.06□□□□□ -2.4
SMN2-208ENST00000508258 C7orf77A4D0Y5 90 aa0.06□□□□□ -2.4
SMN2-208ENST00000508258 ASIPP42127 132 aa0.06□□□□□ -2.4
SMN2-208ENST00000508258 PMCHL1Q16048 86 aa0.06□□□□□ -2.4
SMN2-208ENST00000508258 DEFB109BQ30KR1 87 aa0.06□□□□□ -2.4
SMN2-208ENST00000508258 SNHG12Q9BXW3 62 aa0.06□□□□□ -2.4
SMN2-208ENST00000508258 MYO7BQ6PIF6 2116 aa0.05□□□□□ -2.4
SMN2-208ENST00000508258 EPRSP07814 1512 aaKnown RBP0.05□□□□□ -2.4
SMN2-208ENST00000508258 ABCC2Q92887 1545 aa0.05□□□□□ -2.4
SMN2-208ENST00000508258 FXYD6-FXYD2A0A087WZ82 144 aa0.05□□□□□ -2.4
SMN2-208ENST00000508258 SYS1-DBNDD2H3BUS1 97 aa0.05□□□□□ -2.4
SMN2-208ENST00000508258 K7EQZ3 153 aa0.05□□□□□ -2.4
SMN2-208ENST00000508258 UQCRHP07919 91 aa0.05□□□□□ -2.4
SMN2-208ENST00000508258 COX6B1P14854 86 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms