RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 GVINP1Q7Z2Y8 2422 aa3.52□□□□□ -1.85
HMGB3P16-201ENST00000508037 SPTBN1Q01082 2364 aaKnown RBP3.51□□□□□ -1.85
HMGB3P16-201ENST00000508037 TRGV2A0A075B6R0 118 aa3.51□□□□□ -1.85
HMGB3P16-201ENST00000508037 TRGV4A0A0C4DH28 118 aa3.51□□□□□ -1.85
HMGB3P16-201ENST00000508037 hADV29S1A0JD25 119 aa3.51□□□□□ -1.85
HMGB3P16-201ENST00000508037 NDUFC2-KCTD14E9PQ53 114 aa3.51□□□□□ -1.85
HMGB3P16-201ENST00000508037 BCE1O60756 84 aa3.51□□□□□ -1.85
HMGB3P16-201ENST00000508037 CCL18P55774 89 aa3.51□□□□□ -1.85
HMGB3P16-201ENST00000508037 DEFB136Q30KP8 78 aa3.51□□□□□ -1.85
HMGB3P16-201ENST00000508037 NTM-AS1Q6ZSK4 140 aa3.51□□□□□ -1.85
HMGB3P16-201ENST00000508037 C1orf158Q8N1D5 194 aa3.51□□□□□ -1.85
HMGB3P16-201ENST00000508037 LINC00337Q8N6G1 96 aa3.51□□□□□ -1.85
HMGB3P16-201ENST00000508037 MUC7Q8TAX7 377 aa3.51□□□□□ -1.85
HMGB3P16-201ENST00000508037 SMIM11BQ8TCY0 68 aa3.51□□□□□ -1.85
HMGB3P16-201ENST00000508037 Q9HAA7 133 aa3.51□□□□□ -1.85
HMGB3P16-201ENST00000508037 TOMM7Q9P0U1 55 aa3.51□□□□□ -1.85
HMGB3P16-201ENST00000508037 Q9UF83 564 aa3.51□□□□□ -1.85
HMGB3P16-201ENST00000508037 DOPEY2Q9Y3R5 2298 aa3.51□□□□□ -1.85
HMGB3P16-201ENST00000508037 ZZEF1O43149 2961 aa3.51□□□□□ -1.85
HMGB3P16-201ENST00000508037 RIF1Q5UIP0 2472 aaKnown RBP3.5□□□□□ -1.85
HMGB3P16-201ENST00000508037 COL6A6A6NMZ7 2263 aa3.5□□□□□ -1.85
HMGB3P16-201ENST00000508037 IGKV2-28A0A075B6P5 120 aa3.5□□□□□ -1.85
HMGB3P16-201ENST00000508037 A0A096LNT2 108 aa3.5□□□□□ -1.85
HMGB3P16-201ENST00000508037 TRBV6-8A0A0A6YYG3 113 aa3.5□□□□□ -1.85
HMGB3P16-201ENST00000508037 TRBV10-3A0A0K0K1G6 114 aa3.5□□□□□ -1.85
HMGB3P16-201ENST00000508037 TMEM256-PLSCR3K7ERE1 68 aa3.5□□□□□ -1.85
HMGB3P16-201ENST00000508037 LECT2O14960 151 aa3.5□□□□□ -1.85
HMGB3P16-201ENST00000508037 LY6G6DO95868 133 aa3.5□□□□□ -1.85
HMGB3P16-201ENST00000508037 IGKV2D-28P01615 120 aa3.5□□□□□ -1.85
HMGB3P16-201ENST00000508037 CCKP06307 115 aa3.5□□□□□ -1.85
HMGB3P16-201ENST00000508037 SS18Q15532 418 aa3.5□□□□□ -1.85
HMGB3P16-201ENST00000508037 ODF3L2Q3SX64 289 aa3.5□□□□□ -1.85
HMGB3P16-201ENST00000508037 C5orf47Q569G3 176 aa3.5□□□□□ -1.85
HMGB3P16-201ENST00000508037 C6orf226Q5I0X4 101 aa3.5□□□□□ -1.85
HMGB3P16-201ENST00000508037 Q6ZTI0 123 aa3.5□□□□□ -1.85
HMGB3P16-201ENST00000508037 Q8IZM0 81 aa3.5□□□□□ -1.85
HMGB3P16-201ENST00000508037 C2orf48Q96LS8 159 aa3.5□□□□□ -1.85
HMGB3P16-201ENST00000508037 LINC00167Q96N53 147 aa3.5□□□□□ -1.85
HMGB3P16-201ENST00000508037 NOP10Q9NPE3 64 aaKnown RBP3.5□□□□□ -1.85
HMGB3P16-201ENST00000508037 C14orf132Q9NPU4 83 aa3.5□□□□□ -1.85
HMGB3P16-201ENST00000508037 C22orf24Q9Y442 160 aa3.5□□□□□ -1.85
HMGB3P16-201ENST00000508037 TTC28Q96AY4 2481 aa3.5□□□□□ -1.85
HMGB3P16-201ENST00000508037 COL6A3P12111 3177 aa3.5□□□□□ -1.85
HMGB3P16-201ENST00000508037 PIEZO2Q9H5I5 2752 aa3.49□□□□□ -1.85
HMGB3P16-201ENST00000508037 ABCA2Q9BZC7 2435 aa3.49□□□□□ -1.85
HMGB3P16-201ENST00000508037 NACAE9PAV3 2078 aa3.49□□□□□ -1.85
HMGB3P16-201ENST00000508037 A0A087WYN8 130 aa3.49□□□□□ -1.85
HMGB3P16-201ENST00000508037 IGHV3OR16-9A0A0B4J2B5 98 aa3.49□□□□□ -1.85
HMGB3P16-201ENST00000508037 USP17L23D6RBM5 183 aa3.49□□□□□ -1.85
HMGB3P16-201ENST00000508037 NDUFC2O95298 119 aa3.49□□□□□ -1.85
HMGB3P16-201ENST00000508037 PRM2P04554 102 aa3.49□□□□□ -1.85
HMGB3P16-201ENST00000508037 IGHV4-31P0DP07 118 aa3.49□□□□□ -1.85
HMGB3P16-201ENST00000508037 KRTAP10-2P60368 255 aa3.49□□□□□ -1.85
HMGB3P16-201ENST00000508037 COX17Q14061 63 aa3.49□□□□□ -1.85
HMGB3P16-201ENST00000508037 Q96MF0 132 aa3.49□□□□□ -1.85
HMGB3P16-201ENST00000508037 UBL5Q9BZL1 73 aa3.49□□□□□ -1.85
HMGB3P16-201ENST00000508037 IGKV3D-7A0A0C4DH55 119 aa3.48□□□□□ -1.85
HMGB3P16-201ENST00000508037 A0A1B0GUV1 79 aa3.48□□□□□ -1.85
HMGB3P16-201ENST00000508037 ZNF561-AS1K7EIQ3 104 aa3.48□□□□□ -1.85
HMGB3P16-201ENST00000508037 CCL24O00175 119 aa3.48□□□□□ -1.85
HMGB3P16-201ENST00000508037 PDE6GP18545 87 aa3.48□□□□□ -1.85
HMGB3P16-201ENST00000508037 PFN2P35080 140 aa3.48□□□□□ -1.85
HMGB3P16-201ENST00000508037 C18orf65Q6ZTR6 163 aa3.48□□□□□ -1.85
HMGB3P16-201ENST00000508037 LINC00846Q9NV44 126 aa3.48□□□□□ -1.85
HMGB3P16-201ENST00000508037 IGKV3OR2-268A0A0C4DH90 116 aa3.47□□□□□ -1.85
HMGB3P16-201ENST00000508037 LINC00959A0A1B0GUT2 108 aa3.47□□□□□ -1.85
HMGB3P16-201ENST00000508037 C3orf56Q8N813 242 aa3.47□□□□□ -1.85
HMGB3P16-201ENST00000508037 Q8N814 137 aa3.47□□□□□ -1.85
HMGB3P16-201ENST00000508037 KRTAP4-5Q9BYR2 181 aa3.47□□□□□ -1.85
HMGB3P16-201ENST00000508037 ZFHX2Q9C0A1 2572 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P16-201ENST00000508037 HIVEP3Q5T1R4 2406 aa3.46□□□□□ -1.85
HMGB3P16-201ENST00000508037 LOC400499M0QZD8 3231 aa3.46□□□□□ -1.86
HMGB3P16-201ENST00000508037 DMDP11532 3685 aa3.46□□□□□ -1.86
HMGB3P16-201ENST00000508037 SMIM9A6NGZ8 99 aa3.46□□□□□ -1.86
HMGB3P16-201ENST00000508037 NCR3O14931 201 aa3.46□□□□□ -1.86
HMGB3P16-201ENST00000508037 FHL2Q14192 279 aa3.46□□□□□ -1.86
HMGB3P16-201ENST00000508037 LYPD5Q6UWN5 251 aa3.46□□□□□ -1.86
HMGB3P16-201ENST00000508037 FAM19A5Q7Z5A7 132 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P16-201ENST00000508037 KIR2DL5BQ8NHK3 375 aa3.46□□□□□ -1.86
HMGB3P16-201ENST00000508037 UPK3BQ9BT76 320 aa3.46□□□□□ -1.86
HMGB3P16-201ENST00000508037 ZNF292O60281 2723 aa3.46□□□□□ -1.86
HMGB3P16-201ENST00000508037 WDFY4Q6ZS81 3184 aa3.46□□□□□ -1.86
HMGB3P16-201ENST00000508037 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.45□□□□□ -1.86
HMGB3P16-201ENST00000508037 IGLV4-60A0A075B6I1 120 aa3.45□□□□□ -1.86
HMGB3P16-201ENST00000508037 LOC110117498A0A087WWA1 95 aa3.45□□□□□ -1.86
HMGB3P16-201ENST00000508037 IGHV4-28A0A0C4DH34 117 aa3.45□□□□□ -1.86
HMGB3P16-201ENST00000508037 LOC107984640A0A0U1RRK4 108 aa3.45□□□□□ -1.86
HMGB3P16-201ENST00000508037 PLAC8L1A1L4L8 177 aa3.45□□□□□ -1.86
HMGB3P16-201ENST00000508037 DEFB113Q30KQ7 82 aa3.45□□□□□ -1.86
HMGB3P16-201ENST00000508037 CD164L2Q6UWJ8 174 aa3.45□□□□□ -1.86
HMGB3P16-201ENST00000508037 DPH3Q96FX2 82 aa3.45□□□□□ -1.86
HMGB3P16-201ENST00000508037 KRTAP3-1Q9BYR8 98 aa3.45□□□□□ -1.86
HMGB3P16-201ENST00000508037 MGAQ8IWI9 3026 aa3.45□□□□□ -1.86
HMGB3P16-201ENST00000508037 SPTAN1Q13813 2472 aaKnown RBP3.45□□□□□ -1.86
HMGB3P16-201ENST00000508037 TRAV7A0A075B6U4 112 aa3.44□□□□□ -1.86
HMGB3P16-201ENST00000508037 LOC100131303A0A0U1RQF7 123 aa3.44□□□□□ -1.86
HMGB3P16-201ENST00000508037 IGLV1-51P01701 117 aa3.44□□□□□ -1.86
HMGB3P16-201ENST00000508037 GIG44P09565 113 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P16-201ENST00000508037 GYPEP15421 78 aa3.44□□□□□ -1.86
HMGB3P16-201ENST00000508037 RPL35AP18077 110 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms