RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 A0A0U1RRA0 63 aa10.27□□□□□ -0.77
DDX41-208ENST00000507955 TRGV4A0A0C4DH28 118 aa10.26□□□□□ -0.77
DDX41-208ENST00000507955 CKS1BP61024 79 aa10.26□□□□□ -0.77
DDX41-208ENST00000507955 LINC00242Q5T6M2 205 aa10.26□□□□□ -0.77
DDX41-208ENST00000507955 IGKV3OR2-268A0A0C4DH90 116 aa10.25□□□□□ -0.77
DDX41-208ENST00000507955 CRLF1O75462 422 aa10.25□□□□□ -0.77
DDX41-208ENST00000507955 TMEM101Q96IK0 257 aa10.25□□□□□ -0.77
DDX41-208ENST00000507955 LINC01620Q4KN68 170 aa10.25□□□□□ -0.77
DDX41-208ENST00000507955 SPANXDQ9BXN6 97 aa10.25□□□□□ -0.77
DDX41-208ENST00000507955 SPANXCQ9NY87 97 aa10.25□□□□□ -0.77
DDX41-208ENST00000507955 A0A1B0GV72 72 aa10.24□□□□□ -0.77
DDX41-208ENST00000507955 DEFB4AO15263 64 aa10.24□□□□□ -0.77
DDX41-208ENST00000507955 TRBV10-1A0A0K0K1A3 114 aa10.24□□□□□ -0.77
DDX41-208ENST00000507955 MIAQ16674 131 aa10.24□□□□□ -0.77
DDX41-208ENST00000507955 NTN5Q8WTR8 489 aaPredicted RBP10.24□□□□□ -0.77
DDX41-208ENST00000507955 TRBV30A0A0K0K1B3 111 aa10.23□□□□□ -0.77
DDX41-208ENST00000507955 CMC4P56277 68 aaPredicted RBP10.23□□□□□ -0.77
DDX41-208ENST00000507955 DAZ4Q86SG3 579 aaKnown RBP10.23□□□□□ -0.77
DDX41-208ENST00000507955 DAZ3Q9NR90 486 aaKnown RBP10.23□□□□□ -0.77
DDX41-208ENST00000507955 FHL2Q14192 279 aa10.23□□□□□ -0.77
DDX41-208ENST00000507955 ATXN8Q156A1 80 aa10.23□□□□□ -0.77
DDX41-208ENST00000507955 M0QXV9 152 aa10.22□□□□□ -0.77
DDX41-208ENST00000507955 GAGE6Q13070 117 aa10.22□□□□□ -0.77
DDX41-208ENST00000507955 ZFAND6Q6FIF0 208 aa10.22□□□□□ -0.77
DDX41-208ENST00000507955 FAM110AQ9BQ89 295 aa10.22□□□□□ -0.77
DDX41-208ENST00000507955 CDC42SE2Q9NRR3 84 aa10.22□□□□□ -0.77
DDX41-208ENST00000507955 ICOSQ9Y6W8 199 aa10.22□□□□□ -0.77
DDX41-208ENST00000507955 TEX49A0A1B0GTD5 131 aa10.21□□□□□ -0.77
DDX41-208ENST00000507955 OVOL2Q9BRP0 275 aa10.21□□□□□ -0.77
DDX41-208ENST00000507955 A0A096LPF7 62 aa10.21□□□□□ -0.78
DDX41-208ENST00000507955 UBE2L6O14933 153 aa10.2□□□□□ -0.78
DDX41-208ENST00000507955 CLEC2BQ92478 149 aa10.2□□□□□ -0.78
DDX41-208ENST00000507955 IGLV4-60A0A075B6I1 120 aa10.2□□□□□ -0.78
DDX41-208ENST00000507955 TIRAPP58753 221 aa10.2□□□□□ -0.78
DDX41-208ENST00000507955 TMEM243Q9BU79 118 aa10.2□□□□□ -0.78
DDX41-208ENST00000507955 Q9H8V8 135 aa10.2□□□□□ -0.78
DDX41-208ENST00000507955 PKD1L1Q8TDX9 2849 aa10.19□□□□□ -0.78
DDX41-208ENST00000507955 IGLV5-45A0A087WSX0 123 aa10.19□□□□□ -0.78
DDX41-208ENST00000507955 TRBV10-2A0A0K0K1G8 114 aa10.19□□□□□ -0.78
DDX41-208ENST00000507955 TRBV6-4A0A1B0GX49 114 aa10.19□□□□□ -0.78
DDX41-208ENST00000507955 SMIM1B2RUZ4 78 aa10.19□□□□□ -0.78
DDX41-208ENST00000507955 H7C423 109 aa10.18□□□□□ -0.78
DDX41-208ENST00000507955 LINC01600Q96MT4 127 aa10.18□□□□□ -0.78
DDX41-208ENST00000507955 X6R8D5 127 aa10.18□□□□□ -0.78
DDX41-208ENST00000507955 F8P00451 2351 aa10.18□□□□□ -0.78
DDX41-208ENST00000507955 HERVK_113P63121 156 aa10.18□□□□□ -0.78
DDX41-208ENST00000507955 DEFB135Q30KP9 77 aa10.18□□□□□ -0.78
DDX41-208ENST00000507955 NDUFA1O15239 70 aa10.17□□□□□ -0.78
DDX41-208ENST00000507955 RPL13AP40429 203 aaKnown RBP10.17□□□□□ -0.78
DDX41-208ENST00000507955 CHCHD5Q9BSY4 110 aa10.17□□□□□ -0.78
DDX41-208ENST00000507955 CITED1Q99966 193 aa10.17□□□□□ -0.78
DDX41-208ENST00000507955 TRAV26-1A0A087WT03 109 aa10.16□□□□□ -0.78
DDX41-208ENST00000507955 TMEM262E9PQX1 116 aa10.16□□□□□ -0.78
DDX41-208ENST00000507955 CSDC2Q9Y534 153 aaKnown RBP10.16□□□□□ -0.78
DDX41-208ENST00000507955 IGLV5-39A0A0G2JS06 123 aa10.16□□□□□ -0.78
DDX41-208ENST00000507955 F5H768 121 aa10.16□□□□□ -0.78
DDX41-208ENST00000507955 TIMM17BO60830 172 aa10.15□□□□□ -0.78
DDX41-208ENST00000507955 C2orf82Q6UX34 121 aa10.15□□□□□ -0.78
DDX41-208ENST00000507955 TRBV6-8A0A0A6YYG3 113 aa10.15□□□□□ -0.79
DDX41-208ENST00000507955 GYPEP15421 78 aa10.14□□□□□ -0.79
DDX41-208ENST00000507955 SOSTDC1Q6X4U4 206 aa10.14□□□□□ -0.79
DDX41-208ENST00000507955 RNF183Q96D59 192 aa10.14□□□□□ -0.79
DDX41-208ENST00000507955 STAB1Q9NY15 2570 aa10.14□□□□□ -0.79
DDX41-208ENST00000507955 ANK2Q01484 3957 aa10.14□□□□□ -0.79
DDX41-208ENST00000507955 LST1O00453 97 aa10.14□□□□□ -0.79
DDX41-208ENST00000507955 FAM222AQ5U5X8 452 aa10.14□□□□□ -0.79
DDX41-208ENST00000507955 UBE2WQ96B02 151 aa10.14□□□□□ -0.79
DDX41-208ENST00000507955 FBN1P35555 2871 aaKnown RBP10.13□□□□□ -0.79
DDX41-208ENST00000507955 PRIMA1Q86XR5 153 aa10.13□□□□□ -0.79
DDX41-208ENST00000507955 LINC00308Q8TCZ7 52 aa10.13□□□□□ -0.79
DDX41-208ENST00000507955 TOMM7Q9P0U1 55 aa10.13□□□□□ -0.79
DDX41-208ENST00000507955 IFITM1P13164 125 aa10.13□□□□□ -0.79
DDX41-208ENST00000507955 CLPSL2Q6UWE3 100 aa10.13□□□□□ -0.79
DDX41-208ENST00000507955 COX6CP09669 75 aa10.11□□□□□ -0.79
DDX41-208ENST00000507955 C9orf66Q5T8R8 295 aa10.11□□□□□ -0.79
DDX41-208ENST00000507955 MEIG1Q5JSS6 88 aa10.11□□□□□ -0.79
DDX41-208ENST00000507955 Q8N3U1 123 aa10.11□□□□□ -0.79
DDX41-208ENST00000507955 TRAV8-4A0A0B4J246 113 aa10.1□□□□□ -0.79
DDX41-208ENST00000507955 FAM19A3Q7Z5A8 133 aa10.1□□□□□ -0.79
DDX41-208ENST00000507955 C5orf38Q86SI9 138 aa10.1□□□□□ -0.79
DDX41-208ENST00000507955 H3BT86 120 aa10.1□□□□□ -0.79
DDX41-208ENST00000507955 KIR2DL5BQ8NHK3 375 aa10.1□□□□□ -0.79
DDX41-208ENST00000507955 NHLRC4P0CG21 123 aaPredicted RBP10.09□□□□□ -0.79
DDX41-208ENST00000507955 C11orf68Q9H3H3 251 aaKnown RBP10.09□□□□□ -0.79
DDX41-208ENST00000507955 CIRBPQ14011 172 aaKnown RBP10.08□□□□□ -0.8
DDX41-208ENST00000507955 CELA1Q9UNI1 258 aa10.08□□□□□ -0.8
DDX41-208ENST00000507955 LINC00612Q8N6U2 182 aa10.08□□□□□ -0.8
DDX41-208ENST00000507955 IGHV4-28A0A0C4DH34 117 aa10.07□□□□□ -0.8
DDX41-208ENST00000507955 SNCGO76070 127 aa10.07□□□□□ -0.8
DDX41-208ENST00000507955 ANAPC13Q9BS18 74 aa10.07□□□□□ -0.8
DDX41-208ENST00000507955 C15orf53Q8NAA6 179 aa10.07□□□□□ -0.8
DDX41-208ENST00000507955 XCL1P47992 114 aa10.06□□□□□ -0.8
DDX41-208ENST00000507955 GAGE2BQ13066 116 aa10.06□□□□□ -0.8
DDX41-208ENST00000507955 GAGE2EQ4V326 116 aa10.06□□□□□ -0.8
DDX41-208ENST00000507955 GAGE2DQ9UEU5 116 aa10.06□□□□□ -0.8
DDX41-208ENST00000507955 MAST4O15021 2626 aa10.05□□□□□ -0.8
DDX41-208ENST00000507955 IGHV3OR16-9A0A0B4J2B5 98 aa10.05□□□□□ -0.8
DDX41-208ENST00000507955 PAX4O43316 350 aa10.05□□□□□ -0.8
DDX41-208ENST00000507955 HTN3P15516 51 aa10.05□□□□□ -0.8
DDX41-208ENST00000507955 TTC32Q5I0X7 151 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 267.2 ms