RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 CTXND1A0A1B0GTU2 59 aa1.15□□□□□ -2.23
USP53-204ENST00000507906 C9JAW5 83 aa1.15□□□□□ -2.23
USP53-204ENST00000507906 SYS1-DBNDD2H3BUS1 97 aa1.15□□□□□ -2.23
USP53-204ENST00000507906 TRACP01848 142 aa1.15□□□□□ -2.23
USP53-204ENST00000507906 RBP4P02753 201 aa1.15□□□□□ -2.23
USP53-204ENST00000507906 TCRAP04437 139 aa1.15□□□□□ -2.23
USP53-204ENST00000507906 SLC25A5P05141 298 aaKnown RBP1.15□□□□□ -2.23
USP53-204ENST00000507906 SPINK8P0C7L1 97 aa1.15□□□□□ -2.23
USP53-204ENST00000507906 HIST1H1DP16402 221 aaKnown RBP1.15□□□□□ -2.23
USP53-204ENST00000507906 Q56UQ5 140 aa1.15□□□□□ -2.23
USP53-204ENST00000507906 Q6AWC8 147 aa1.15□□□□□ -2.23
USP53-204ENST00000507906 Q6ZS92 163 aa1.15□□□□□ -2.23
USP53-204ENST00000507906 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.15□□□□□ -2.23
USP53-204ENST00000507906 OR10AG1Q8NH19 301 aa1.15□□□□□ -2.23
USP53-204ENST00000507906 LINC00526Q96FQ7 95 aa1.15□□□□□ -2.23
USP53-204ENST00000507906 NAA60Q9H7X0 242 aa1.15□□□□□ -2.23
USP53-204ENST00000507906 TMEM14CQ9P0S9 112 aa1.15□□□□□ -2.23
USP53-204ENST00000507906 HIGD1AQ9Y241 93 aa1.15□□□□□ -2.23
USP53-204ENST00000507906 HILPDAQ9Y5L2 63 aa1.15□□□□□ -2.23
USP53-204ENST00000507906 MPC1Q9Y5U8 109 aa1.15□□□□□ -2.23
USP53-204ENST00000507906 SPCS1Q9Y6A9 102 aa1.15□□□□□ -2.23
USP53-204ENST00000507906 V9GYV3 84 aa1.15□□□□□ -2.23
USP53-204ENST00000507906 PI4KAP42356 2102 aa1.15□□□□□ -2.23
USP53-204ENST00000507906 A0A1B0GWA3 101 aa1.14□□□□□ -2.23
USP53-204ENST00000507906 LOC107986453A0A1B0GWG9 222 aa1.14□□□□□ -2.23
USP53-204ENST00000507906 H3BSH0 61 aa1.14□□□□□ -2.23
USP53-204ENST00000507906 J3QR89 54 aa1.14□□□□□ -2.23
USP53-204ENST00000507906 SSSCA1O60232 199 aa1.14□□□□□ -2.23
USP53-204ENST00000507906 HMGN2P05204 90 aaKnown RBP1.14□□□□□ -2.23
USP53-204ENST00000507906 BLCAPP62952 87 aa1.14□□□□□ -2.23
USP53-204ENST00000507906 SERF2P84101 59 aa1.14□□□□□ -2.23
USP53-204ENST00000507906 CATR1Q13166 79 aa1.14□□□□□ -2.23
USP53-204ENST00000507906 ETDBQ3ZM63 59 aa1.14□□□□□ -2.23
USP53-204ENST00000507906 NMSQ5H8A3 153 aa1.14□□□□□ -2.23
USP53-204ENST00000507906 LINC01545Q5VT33 79 aa1.14□□□□□ -2.23
USP53-204ENST00000507906 SLC48A1Q6P1K1 146 aa1.14□□□□□ -2.23
USP53-204ENST00000507906 SBSPONQ8IVN8 264 aa1.14□□□□□ -2.23
USP53-204ENST00000507906 OTOSQ8NHW6 89 aa1.14□□□□□ -2.23
USP53-204ENST00000507906 ARHGAP5-AS1Q96IT6 56 aa1.14□□□□□ -2.23
USP53-204ENST00000507906 AP1S3Q96PC3 154 aa1.14□□□□□ -2.23
USP53-204ENST00000507906 TMEM191AQ9H0A3 160 aa1.14□□□□□ -2.23
USP53-204ENST00000507906 WFDC10AQ9H1F0 79 aa1.14□□□□□ -2.23
USP53-204ENST00000507906 SPANXA1Q9NS26 97 aa1.14□□□□□ -2.23
USP53-204ENST00000507906 RABAC1Q9UI14 185 aa1.14□□□□□ -2.23
USP53-204ENST00000507906 TECTAO75443 2155 aa1.14□□□□□ -2.23
USP53-204ENST00000507906 IGHV1-24A0A0C4DH33 117 aa1.13□□□□□ -2.23
USP53-204ENST00000507906 LOC107984156A0A0G2JMH3 177 aa1.13□□□□□ -2.23
USP53-204ENST00000507906 SMIM27A0A1W2PRY6 76 aa1.13□□□□□ -2.23
USP53-204ENST00000507906 JMJD7-PLA2G4BH0Y9G9 81 aa1.13□□□□□ -2.23
USP53-204ENST00000507906 M0R2Z0 102 aa1.13□□□□□ -2.23
USP53-204ENST00000507906 DPM2O94777 84 aa1.13□□□□□ -2.23
USP53-204ENST00000507906 NCR2O95944 276 aa1.13□□□□□ -2.23
USP53-204ENST00000507906 IGLV3-1P01715 115 aa1.13□□□□□ -2.23
USP53-204ENST00000507906 HBDP02042 147 aa1.13□□□□□ -2.23
USP53-204ENST00000507906 DBIP07108 87 aaKnown RBP1.13□□□□□ -2.23
USP53-204ENST00000507906 SMIM13P0DJ93 91 aa1.13□□□□□ -2.23
USP53-204ENST00000507906 SAA1P0DJI8 122 aaPredicted RBP1.13□□□□□ -2.23
USP53-204ENST00000507906 LINC00694P0DN24 101 aa1.13□□□□□ -2.23
USP53-204ENST00000507906 HLA-DRB4P13762 266 aa1.13□□□□□ -2.23
USP53-204ENST00000507906 EVI2AP22794 236 aa1.13□□□□□ -2.23
USP53-204ENST00000507906 RPS27P42677 84 aaKnown RBP1.13□□□□□ -2.23
USP53-204ENST00000507906 MEIG1Q5JSS6 88 aa1.13□□□□□ -2.23
USP53-204ENST00000507906 CFAP126Q5VTH2 177 aa1.13□□□□□ -2.23
USP53-204ENST00000507906 CASC2Q6XLA1 102 aa1.13□□□□□ -2.23
USP53-204ENST00000507906 ARL17AQ8IVW1 177 aa1.13□□□□□ -2.23
USP53-204ENST00000507906 PPDPFLQ8WWR9 84 aa1.13□□□□□ -2.23
USP53-204ENST00000507906 HIGD1BQ9P298 99 aa1.13□□□□□ -2.23
USP53-204ENST00000507906 R4GMQ9 66 aa1.13□□□□□ -2.23
USP53-204ENST00000507906 ARL2-SNX15V9GYD0 113 aa1.13□□□□□ -2.23
USP53-204ENST00000507906 HLA-DRB4X5D2U9 266 aa1.13□□□□□ -2.23
USP53-204ENST00000507906 CADP27708 2225 aa1.13□□□□□ -2.23
USP53-204ENST00000507906 ASCC3Q8N3C0 2202 aaKnown RBP1.13□□□□□ -2.23
USP53-204ENST00000507906 NAV3Q8IVL0 2385 aa1.13□□□□□ -2.23
USP53-204ENST00000507906 PDE4DIPQ5VU43 2346 aa1.12□□□□□ -2.23
USP53-204ENST00000507906 TRBV7-3A0A075B6L6 115 aa1.12□□□□□ -2.23
USP53-204ENST00000507906 UBE2L5PA0A1B0GUS4 154 aa1.12□□□□□ -2.23
USP53-204ENST00000507906 TMEM262E9PQX1 116 aa1.12□□□□□ -2.23
USP53-204ENST00000507906 OR2H2O95918 312 aa1.12□□□□□ -2.23
USP53-204ENST00000507906 SCTP09683 121 aa1.12□□□□□ -2.23
USP53-204ENST00000507906 IFI6P09912 130 aa1.12□□□□□ -2.23
USP53-204ENST00000507906 IFITM1P13164 125 aa1.12□□□□□ -2.23
USP53-204ENST00000507906 CCL4P13236 92 aa1.12□□□□□ -2.23
USP53-204ENST00000507906 HMGA1P17096 107 aaKnown RBP1.12□□□□□ -2.23
USP53-204ENST00000507906 SPINT3P49223 89 aa1.12□□□□□ -2.23
USP53-204ENST00000507906 TFF3Q07654 80 aa1.12□□□□□ -2.23
USP53-204ENST00000507906 LINC01600Q96MT4 127 aa1.12□□□□□ -2.23
USP53-204ENST00000507906 PSENENQ9NZ42 101 aa1.12□□□□□ -2.23
USP53-204ENST00000507906 TRBV20-1A0A075B6N2 111 aa1.11□□□□□ -2.23
USP53-204ENST00000507906 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.11□□□□□ -2.23
USP53-204ENST00000507906 TRBV7-7A0A0K0K1E9 115 aa1.11□□□□□ -2.23
USP53-204ENST00000507906 RBAKDNA6NC62 111 aa1.11□□□□□ -2.23
USP53-204ENST00000507906 M0R2P5 195 aa1.11□□□□□ -2.23
USP53-204ENST00000507906 NPFFO15130 113 aa1.11□□□□□ -2.23
USP53-204ENST00000507906 SPINK4O60575 86 aa1.11□□□□□ -2.23
USP53-204ENST00000507906 LEPROTL1O95214 131 aa1.11□□□□□ -2.23
USP53-204ENST00000507906 IGHV3-33P01772 117 aa1.11□□□□□ -2.23
USP53-204ENST00000507906 IGLC6P0CF74 106 aa1.11□□□□□ -2.23
USP53-204ENST00000507906 ARL14EPLP0DKL9 152 aa1.11□□□□□ -2.23
USP53-204ENST00000507906 IAPPP10997 89 aa1.11□□□□□ -2.23
USP53-204ENST00000507906 GCHFRP30047 84 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms