RNA–Protein interactions for RNA: ENST00000507905.6

SMN1-206, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 431 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-206ENST00000507905 SYNE1Q8NF91 8797 aaKnown RBP0.31□□□□□ -2.36
SMN1-206ENST00000507905 COX6CP09669 75 aa0.31□□□□□ -2.36
SMN1-206ENST00000507905 SPRR4Q96PI1 79 aa0.31□□□□□ -2.36
SMN1-206ENST00000507905 TP53AIP1Q9HCN2 124 aa0.31□□□□□ -2.36
SMN1-206ENST00000507905 ABCC5O15440 1437 aa0.3□□□□□ -2.36
SMN1-206ENST00000507905 NSD3Q9BZ95 1437 aa0.3□□□□□ -2.36
SMN1-206ENST00000507905 ANK2Q01484 3957 aa0.3□□□□□ -2.36
SMN1-206ENST00000507905 EHBP1L1Q8N3D4 1523 aa0.3□□□□□ -2.36
SMN1-206ENST00000507905 C2CD3Q4AC94 2353 aa0.3□□□□□ -2.36
SMN1-206ENST00000507905 TRAV30A0A087WSZ9 112 aa0.3□□□□□ -2.36
SMN1-206ENST00000507905 GNGT2O14610 69 aa0.3□□□□□ -2.36
SMN1-206ENST00000507905 KRTDAPP60985 99 aa0.3□□□□□ -2.36
SMN1-206ENST00000507905 SHANK2Q9UPX8 1470 aa0.29□□□□□ -2.36
SMN1-206ENST00000507905 TOP2BQ02880 1626 aa0.29□□□□□ -2.36
SMN1-206ENST00000507905 RAPGEF6Q8TEU7 1601 aa0.29□□□□□ -2.36
SMN1-206ENST00000507905 FAM223BA6NKX1 122 aa0.29□□□□□ -2.36
SMN1-206ENST00000507905 CFDP00746 253 aaPredicted RBP0.29□□□□□ -2.36
SMN1-206ENST00000507905 C10orf113Q5VZT2 155 aa0.29□□□□□ -2.36
SMN1-206ENST00000507905 Q8IZM0 81 aa0.29□□□□□ -2.36
SMN1-206ENST00000507905 TMEM263Q8WUH6 116 aaKnown RBP0.29□□□□□ -2.36
SMN1-206ENST00000507905 BIVM-ERCC5R4GMW8 1640 aa0.28□□□□□ -2.36
SMN1-206ENST00000507905 SCN7AQ01118 1682 aa0.28□□□□□ -2.36
SMN1-206ENST00000507905 ABCA3Q99758 1704 aa0.28□□□□□ -2.36
SMN1-206ENST00000507905 A0A1B0GWA3 101 aa0.28□□□□□ -2.36
SMN1-206ENST00000507905 I3L2K1 104 aa0.28□□□□□ -2.36
SMN1-206ENST00000507905 MT-ATP8P03928 68 aa0.28□□□□□ -2.36
SMN1-206ENST00000507905 FXYD6-FXYD2A0A087WZ82 144 aa0.27□□□□□ -2.37
SMN1-206ENST00000507905 FDCSPQ8NFU4 85 aa0.27□□□□□ -2.37
SMN1-206ENST00000507905 ANKHD1Q8IWZ3 2542 aaKnown RBP0.27□□□□□ -2.37
SMN1-206ENST00000507905 IGSF10Q6WRI0 2623 aa0.27□□□□□ -2.37
SMN1-206ENST00000507905 FAT4Q6V0I7 4981 aa0.27□□□□□ -2.37
SMN1-206ENST00000507905 CHD1O14646 1710 aa0.27□□□□□ -2.37
SMN1-206ENST00000507905 MYO7BQ6PIF6 2116 aa0.26□□□□□ -2.37
SMN1-206ENST00000507905 CELSR1Q9NYQ6 3014 aa0.26□□□□□ -2.37
SMN1-206ENST00000507905 MPC2O95563 127 aa0.26□□□□□ -2.37
SMN1-206ENST00000507905 NCMAPQ5T1S8 102 aa0.26□□□□□ -2.37
SMN1-206ENST00000507905 LCN9Q8WX39 176 aa0.26□□□□□ -2.37
SMN1-206ENST00000507905 U3KQA8 63 aa0.26□□□□□ -2.37
SMN1-206ENST00000507905 ADGRL2O95490 1459 aa0.26□□□□□ -2.37
SMN1-206ENST00000507905 TOPAZ1Q8N9V7 1692 aa0.26□□□□□ -2.37
SMN1-206ENST00000507905 MUC2Q02817 5179 aa0.26□□□□□ -2.37
SMN1-206ENST00000507905 NCOR2Q9Y618 2525 aa0.25□□□□□ -2.37
SMN1-206ENST00000507905 PTPRQQ9UMZ3 2332 aa0.25□□□□□ -2.37
SMN1-206ENST00000507905 COL4A6Q14031 1691 aa0.25□□□□□ -2.37
SMN1-206ENST00000507905 ARHGEF12Q9NZN5 1544 aa0.25□□□□□ -2.37
SMN1-206ENST00000507905 CNTLNQ9NXG0 1405 aa0.25□□□□□ -2.37
SMN1-206ENST00000507905 TRBV6-1A0A0K0K1D8 114 aa0.25□□□□□ -2.37
SMN1-206ENST00000507905 SAA2P0DJI9 122 aaPredicted RBP0.25□□□□□ -2.37
SMN1-206ENST00000507905 LINC01600Q96MT4 127 aa0.25□□□□□ -2.37
SMN1-206ENST00000507905 USF3Q68DE3 2245 aa0.25□□□□□ -2.37
SMN1-206ENST00000507905 HRNRQ86YZ3 2850 aaPredicted RBP0.24□□□□□ -2.37
SMN1-206ENST00000507905 DIP2CQ9Y2E4 1556 aa0.24□□□□□ -2.37
SMN1-206ENST00000507905 A0A0G2JND7 137 aa0.24□□□□□ -2.37
SMN1-206ENST00000507905 WFDC2Q14508 124 aa0.24□□□□□ -2.37
SMN1-206ENST00000507905 ACBD7Q8N6N7 88 aa0.24□□□□□ -2.37
SMN1-206ENST00000507905 CACFD1Q9UGQ2 172 aa0.24□□□□□ -2.37
SMN1-206ENST00000507905 AP4S1Q9Y587 144 aa0.24□□□□□ -2.37
SMN1-206ENST00000507905 UBR5O95071 2799 aaPredicted RBP0.24□□□□□ -2.37
SMN1-206ENST00000507905 PAPPAQ13219 1627 aa0.24□□□□□ -2.37
SMN1-206ENST00000507905 NHSL1Q5SYE7 1610 aa0.24□□□□□ -2.37
SMN1-206ENST00000507905 GOLGA4Q13439 2230 aaKnown RBP0.23□□□□□ -2.37
SMN1-206ENST00000507905 POLA1P09884 1462 aaPredicted RBP0.23□□□□□ -2.37
SMN1-206ENST00000507905 ASIPP42127 132 aa0.23□□□□□ -2.37
SMN1-206ENST00000507905 PIGYQ3MUY2 71 aa0.23□□□□□ -2.37
SMN1-206ENST00000507905 PMCHL2Q9BQD1 86 aa0.23□□□□□ -2.37
SMN1-206ENST00000507905 AKAP6Q13023 2319 aa0.22□□□□□ -2.37
SMN1-206ENST00000507905 PRO1933Q9H354 126 aa0.22□□□□□ -2.37
SMN1-206ENST00000507905 MAGI1Q96QZ7 1491 aaPredicted RBP0.22□□□□□ -2.37
SMN1-206ENST00000507905 PIEZO2Q9H5I5 2752 aa0.22□□□□□ -2.37
SMN1-206ENST00000507905 ANKRD36BQ8N2N9 1353 aa0.21□□□□□ -2.38
SMN1-206ENST00000507905 CACNA1AO00555 2505 aa0.21□□□□□ -2.38
SMN1-206ENST00000507905 PDCD11Q14690 1871 aaKnown RBP0.21□□□□□ -2.38
SMN1-206ENST00000507905 A0A087WVE0 104 aa0.21□□□□□ -2.38
SMN1-206ENST00000507905 C7orf77A4D0Y5 90 aa0.21□□□□□ -2.38
SMN1-206ENST00000507905 M0R143 59 aa0.21□□□□□ -2.38
SMN1-206ENST00000507905 DEFB109BQ30KR1 87 aa0.21□□□□□ -2.38
SMN1-206ENST00000507905 C1orf167Q5SNV9 1468 aa0.21□□□□□ -2.38
SMN1-206ENST00000507905 LINC00959A0A1B0GUT2 108 aa0.2□□□□□ -2.38
SMN1-206ENST00000507905 NDUFC1O43677 76 aa0.2□□□□□ -2.38
SMN1-206ENST00000507905 MRC2Q9UBG0 1479 aa0.2□□□□□ -2.38
SMN1-206ENST00000507905 ZFHX3Q15911 3703 aa0.2□□□□□ -2.38
SMN1-206ENST00000507905 PPRC1Q5VV67 1664 aaKnown RBP0.2□□□□□ -2.38
SMN1-206ENST00000507905 PRDM15P57071 1507 aaPredicted RBP0.19□□□□□ -2.38
SMN1-206ENST00000507905 PKDREJQ9NTG1 2253 aa0.19□□□□□ -2.38
SMN1-206ENST00000507905 MLH3Q9UHC1 1453 aa0.19□□□□□ -2.38
SMN1-206ENST00000507905 TRBV25-1A0A075B6N4 114 aa0.19□□□□□ -2.38
SMN1-206ENST00000507905 LINC00032P0C843 101 aa0.19□□□□□ -2.38
SMN1-206ENST00000507905 SPRR1AP35321 89 aa0.19□□□□□ -2.38
SMN1-206ENST00000507905 Q5VSD8 79 aa0.19□□□□□ -2.38
SMN1-206ENST00000507905 TRGV9Q99603 122 aa0.19□□□□□ -2.38
SMN1-206ENST00000507905 VAMP8Q9BV40 100 aa0.19□□□□□ -2.38
SMN1-206ENST00000507905 DPY30Q9C005 99 aa0.19□□□□□ -2.38
SMN1-206ENST00000507905 LINC00846Q9NV44 126 aa0.19□□□□□ -2.38
SMN1-206ENST00000507905 SPTBN4Q9H254 2564 aa0.19□□□□□ -2.38
SMN1-206ENST00000507905 STAB1Q9NY15 2570 aa0.19□□□□□ -2.38
SMN1-206ENST00000507905 DOPEY2Q9Y3R5 2298 aa0.18□□□□□ -2.38
SMN1-206ENST00000507905 NUP188Q5SRE5 1749 aa0.18□□□□□ -2.38
SMN1-206ENST00000507905 HIVEP3Q5T1R4 2406 aa0.18□□□□□ -2.38
SMN1-206ENST00000507905 NLRP1Q9C000 1473 aa0.18□□□□□ -2.38
SMN1-206ENST00000507905 TRBV7-4A0A0J9YYF1 115 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms