RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 UBE2D1P51668 147 aa5.59□□□□□ -1.51
PDGFC-205ENST00000506880 FOXI1Q12951 378 aa5.59□□□□□ -1.51
PDGFC-205ENST00000506880 ODF1Q14990 250 aa5.59□□□□□ -1.51
PDGFC-205ENST00000506880 PDZD11Q5EBL8 140 aa5.59□□□□□ -1.51
PDGFC-205ENST00000506880 Q6ZUT4 128 aa5.59□□□□□ -1.51
PDGFC-205ENST00000506880 Q8N3U1 123 aa5.59□□□□□ -1.51
PDGFC-205ENST00000506880 HSPB8Q9UJY1 196 aa5.59□□□□□ -1.51
PDGFC-205ENST00000506880 DNAH2Q9P225 4427 aa5.59□□□□□ -1.51
PDGFC-205ENST00000506880 IGLV5-45A0A087WSX0 123 aa5.58□□□□□ -1.52
PDGFC-205ENST00000506880 A0A087WZ39 114 aa5.58□□□□□ -1.52
PDGFC-205ENST00000506880 TINCRA0A1B0GVN0 87 aa5.58□□□□□ -1.52
PDGFC-205ENST00000506880 FAM104AQ969W3 186 aa5.58□□□□□ -1.52
PDGFC-205ENST00000506880 C2orf48Q96LS8 159 aa5.58□□□□□ -1.52
PDGFC-205ENST00000506880 FAT2Q9NYQ8 4349 aa5.58□□□□□ -1.52
PDGFC-205ENST00000506880 EPPK1P58107 5090 aaKnown RBP5.57□□□□□ -1.52
PDGFC-205ENST00000506880 TRAV13-1A0A0B4J241 112 aa5.57□□□□□ -1.52
PDGFC-205ENST00000506880 GAGE12HA6NDE8 117 aa5.57□□□□□ -1.52
PDGFC-205ENST00000506880 USP17L23D6RBM5 183 aa5.57□□□□□ -1.52
PDGFC-205ENST00000506880 MALP21145 153 aa5.57□□□□□ -1.52
PDGFC-205ENST00000506880 CXCL5P42830 114 aa5.57□□□□□ -1.52
PDGFC-205ENST00000506880 RNF151Q2KHN1 245 aa5.57□□□□□ -1.52
PDGFC-205ENST00000506880 URB1-AS1Q96HZ7 61 aa5.57□□□□□ -1.52
PDGFC-205ENST00000506880 IGLV10-54A0A075B6I4 117 aa5.56□□□□□ -1.52
PDGFC-205ENST00000506880 A0A096LNJ9 63 aa5.56□□□□□ -1.52
PDGFC-205ENST00000506880 H3BRM9 83 aa5.56□□□□□ -1.52
PDGFC-205ENST00000506880 HIST1H2BKO60814 126 aa5.56□□□□□ -1.52
PDGFC-205ENST00000506880 HIST1H2BJP06899 126 aa5.56□□□□□ -1.52
PDGFC-205ENST00000506880 HIST1H2BOP23527 126 aa5.56□□□□□ -1.52
PDGFC-205ENST00000506880 HIST1H2BBP33778 126 aa5.56□□□□□ -1.52
PDGFC-205ENST00000506880 XCL1P47992 114 aa5.56□□□□□ -1.52
PDGFC-205ENST00000506880 HIST1H2BDP58876 126 aa5.56□□□□□ -1.52
PDGFC-205ENST00000506880 HIST1H2BCP62807 126 aa5.56□□□□□ -1.52
PDGFC-205ENST00000506880 HIST2H2BEQ16778 126 aa5.56□□□□□ -1.52
PDGFC-205ENST00000506880 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.56□□□□□ -1.52
PDGFC-205ENST00000506880 LINC00242Q5T6M2 205 aa5.56□□□□□ -1.52
PDGFC-205ENST00000506880 LINC00173Q6ZV60 143 aa5.56□□□□□ -1.52
PDGFC-205ENST00000506880 MAPKAPK5-AS1Q8N8E1 139 aa5.56□□□□□ -1.52
PDGFC-205ENST00000506880 HIST1H2BHQ93079 126 aa5.56□□□□□ -1.52
PDGFC-205ENST00000506880 IFI27L1Q96BM0 104 aa5.56□□□□□ -1.52
PDGFC-205ENST00000506880 HIST1H2BNQ99877 126 aa5.56□□□□□ -1.52
PDGFC-205ENST00000506880 HIST1H2BMQ99879 126 aa5.56□□□□□ -1.52
PDGFC-205ENST00000506880 CST9LQ9H4G1 147 aa5.56□□□□□ -1.52
PDGFC-205ENST00000506880 GEMIN7Q9H840 131 aaKnown RBP5.56□□□□□ -1.52
PDGFC-205ENST00000506880 LINC00474Q9P2X8 69 aa5.56□□□□□ -1.52
PDGFC-205ENST00000506880 PKHD1P08F94 4074 aa5.55□□□□□ -1.52
PDGFC-205ENST00000506880 IGHV3-64A0A075B6Q5 118 aa5.55□□□□□ -1.52
PDGFC-205ENST00000506880 IGLV5-52A0A0A0MRZ9 124 aa5.55□□□□□ -1.52
PDGFC-205ENST00000506880 ZNF561-AS1K7EIQ3 104 aa5.55□□□□□ -1.52
PDGFC-205ENST00000506880 CDK2AP2O75956 126 aa5.55□□□□□ -1.52
PDGFC-205ENST00000506880 LEPROTL1O95214 131 aa5.55□□□□□ -1.52
PDGFC-205ENST00000506880 IGLC3P0DOY3 106 aa5.55□□□□□ -1.52
PDGFC-205ENST00000506880 CLPSL2Q6UWE3 100 aa5.55□□□□□ -1.52
PDGFC-205ENST00000506880 SPATA12Q7Z6I5 190 aa5.55□□□□□ -1.52
PDGFC-205ENST00000506880 C9orf163Q8N9P6 203 aa5.55□□□□□ -1.52
PDGFC-205ENST00000506880 BAALCQ8WXS3 180 aa5.55□□□□□ -1.52
PDGFC-205ENST00000506880 C16orf90A8MZG2 172 aa5.54□□□□□ -1.52
PDGFC-205ENST00000506880 SERF1AO75920 110 aa5.54□□□□□ -1.52
PDGFC-205ENST00000506880 GCSHP23434 173 aa5.54□□□□□ -1.52
PDGFC-205ENST00000506880 Q8IZM0 81 aa5.54□□□□□ -1.52
PDGFC-205ENST00000506880 C15orf56Q8N910 161 aa5.54□□□□□ -1.52
PDGFC-205ENST00000506880 IGLV4-69A0A075B6H9 119 aa5.53□□□□□ -1.52
PDGFC-205ENST00000506880 IGKV3OR2-268A0A0C4DH90 116 aa5.53□□□□□ -1.52
PDGFC-205ENST00000506880 TRBV30A0A0K0K1B3 111 aa5.53□□□□□ -1.52
PDGFC-205ENST00000506880 hDV102S1A0JD36 115 aa5.53□□□□□ -1.52
PDGFC-205ENST00000506880 F8VRH5 84 aa5.53□□□□□ -1.52
PDGFC-205ENST00000506880 SCO1O75880 301 aa5.53□□□□□ -1.52
PDGFC-205ENST00000506880 PRSS1P07477 247 aa5.53□□□□□ -1.52
PDGFC-205ENST00000506880 PLNP26678 52 aa5.53□□□□□ -1.52
PDGFC-205ENST00000506880 DEFB104AQ8WTQ1 72 aa5.53□□□□□ -1.52
PDGFC-205ENST00000506880 MAP1LC3CQ9BXW4 147 aa5.53□□□□□ -1.52
PDGFC-205ENST00000506880 MRPL35Q9NZE8 188 aaKnown RBP5.53□□□□□ -1.52
PDGFC-205ENST00000506880 PKD1P98161 4303 aa5.52□□□□□ -1.53
PDGFC-205ENST00000506880 NDUFA1O15239 70 aa5.52□□□□□ -1.53
PDGFC-205ENST00000506880 LCE1DQ5T752 114 aa5.52□□□□□ -1.53
PDGFC-205ENST00000506880 Q6ZSA8 131 aa5.52□□□□□ -1.53
PDGFC-205ENST00000506880 KRTAP4-2Q9BYR5 136 aa5.52□□□□□ -1.53
PDGFC-205ENST00000506880 LINC00587B1AMM8 73 aa5.51□□□□□ -1.53
PDGFC-205ENST00000506880 PRSS2P07478 247 aa5.51□□□□□ -1.53
PDGFC-205ENST00000506880 TLX1NBP0CAT3 122 aa5.51□□□□□ -1.53
PDGFC-205ENST00000506880 LINC00310P59036 64 aa5.51□□□□□ -1.53
PDGFC-205ENST00000506880 SYCNQ0VAF6 134 aa5.51□□□□□ -1.53
PDGFC-205ENST00000506880 CIRBPQ14011 172 aaKnown RBP5.51□□□□□ -1.53
PDGFC-205ENST00000506880 OPRPNQ99935 248 aaPredicted RBP5.51□□□□□ -1.53
PDGFC-205ENST00000506880 IGLV5-39A0A0G2JS06 123 aa5.5□□□□□ -1.53
PDGFC-205ENST00000506880 C11orf86A6NJI1 115 aa5.5□□□□□ -1.53
PDGFC-205ENST00000506880 S100A6P06703 90 aa5.5□□□□□ -1.53
PDGFC-205ENST00000506880 KRTAP10-2P60368 255 aa5.5□□□□□ -1.53
PDGFC-205ENST00000506880 SPAG11BQ08648 103 aa5.5□□□□□ -1.53
PDGFC-205ENST00000506880 RNASE13Q5GAN3 156 aaKnown RBP5.5□□□□□ -1.53
PDGFC-205ENST00000506880 PET117Q6UWS5 81 aa5.5□□□□□ -1.53
PDGFC-205ENST00000506880 LINC00469Q8N7U9 141 aa5.5□□□□□ -1.53
PDGFC-205ENST00000506880 ORAOV1Q8WV07 137 aa5.5□□□□□ -1.53
PDGFC-205ENST00000506880 CARD19Q96LW7 228 aa5.5□□□□□ -1.53
PDGFC-205ENST00000506880 CHAC1Q9BUX1 264 aa5.5□□□□□ -1.53
PDGFC-205ENST00000506880 CHTOPQ9Y3Y2 248 aaKnown RBP5.5□□□□□ -1.53
PDGFC-205ENST00000506880 SNRPEP62304 92 aaKnown RBP5.49□□□□□ -1.53
PDGFC-205ENST00000506880 COX17Q14061 63 aa5.49□□□□□ -1.53
PDGFC-205ENST00000506880 WFDC2Q14508 124 aa5.49□□□□□ -1.53
PDGFC-205ENST00000506880 C5orf38Q86SI9 138 aa5.49□□□□□ -1.53
PDGFC-205ENST00000506880 CAMK2N2Q96S95 79 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms