RNA–Protein interactions for RNA: ENST00000506842.1

HERC6-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-207ENST00000506842 GNG13Q9P2W3 67 aa2.87□□□□□ -1.95
HERC6-207ENST00000506842 TRBV25-1A0A075B6N4 114 aa2.86□□□□□ -1.95
HERC6-207ENST00000506842 IGKV2D-24A0A075B6R9 120 aa2.86□□□□□ -1.95
HERC6-207ENST00000506842 A0A096LNJ9 63 aa2.86□□□□□ -1.95
HERC6-207ENST00000506842 TRAV8-4A0A0B4J246 113 aa2.86□□□□□ -1.95
HERC6-207ENST00000506842 MUC21A0A0G2JKD1 596 aa2.86□□□□□ -1.95
HERC6-207ENST00000506842 MUC21A0A140T8X8 626 aa2.86□□□□□ -1.95
HERC6-207ENST00000506842 A0A1B0GV50 99 aa2.86□□□□□ -1.95
HERC6-207ENST00000506842 TMEM250H0YL14 139 aa2.86□□□□□ -1.95
HERC6-207ENST00000506842 IFNA1P01562 189 aa2.86□□□□□ -1.95
HERC6-207ENST00000506842 P01737 135 aa2.86□□□□□ -1.95
HERC6-207ENST00000506842 TRGC1P0CF51 173 aa2.86□□□□□ -1.95
HERC6-207ENST00000506842 SMIM17P0DL12 118 aa2.86□□□□□ -1.95
HERC6-207ENST00000506842 BCL2P10415 239 aa2.86□□□□□ -1.95
HERC6-207ENST00000506842 GNG4P50150 75 aa2.86□□□□□ -1.95
HERC6-207ENST00000506842 KRTAP10-4P60372 401 aaPredicted RBP2.86□□□□□ -1.95
HERC6-207ENST00000506842 RBX1P62877 108 aa2.86□□□□□ -1.95
HERC6-207ENST00000506842 MPV17L2Q567V2 206 aa2.86□□□□□ -1.95
HERC6-207ENST00000506842 CENPWQ5EE01 88 aa2.86□□□□□ -1.95
HERC6-207ENST00000506842 RASL11AQ6T310 242 aa2.86□□□□□ -1.95
HERC6-207ENST00000506842 LYZL1Q6UWQ5 148 aa2.86□□□□□ -1.95
HERC6-207ENST00000506842 FAM231DQ6ZW35 169 aa2.86□□□□□ -1.95
HERC6-207ENST00000506842 PCP2Q8IVA1 136 aa2.86□□□□□ -1.95
HERC6-207ENST00000506842 Q8N9L7 120 aa2.86□□□□□ -1.95
HERC6-207ENST00000506842 C9orf163Q8N9P6 203 aa2.86□□□□□ -1.95
HERC6-207ENST00000506842 FAM104AQ969W3 186 aa2.86□□□□□ -1.95
HERC6-207ENST00000506842 AP1S3Q96PC3 154 aa2.86□□□□□ -1.95
HERC6-207ENST00000506842 CHAC1Q9BUX1 264 aa2.86□□□□□ -1.95
HERC6-207ENST00000506842 DNAH5Q8TE73 4624 aa2.86□□□□□ -1.95
HERC6-207ENST00000506842 APOBP04114 4563 aaKnown RBP2.86□□□□□ -1.95
HERC6-207ENST00000506842 IGHV1-24A0A0C4DH33 117 aa2.85□□□□□ -1.95
HERC6-207ENST00000506842 K7EN84 100 aa2.85□□□□□ -1.95
HERC6-207ENST00000506842 ANGP03950 147 aaKnown RBP2.85□□□□□ -1.95
HERC6-207ENST00000506842 UBE2AP49459 152 aa2.85□□□□□ -1.95
HERC6-207ENST00000506842 KRTAP12-2P59991 146 aa2.85□□□□□ -1.95
HERC6-207ENST00000506842 ZNF56Q15929 161 aa2.85□□□□□ -1.95
HERC6-207ENST00000506842 TEX261Q6UWH6 196 aa2.85□□□□□ -1.95
HERC6-207ENST00000506842 SDIM1Q6ZPB5 146 aa2.85□□□□□ -1.95
HERC6-207ENST00000506842 CIRBP-AS1Q8TBR5 109 aa2.85□□□□□ -1.95
HERC6-207ENST00000506842 DEFB104AQ8WTQ1 72 aa2.85□□□□□ -1.95
HERC6-207ENST00000506842 DPH3P1Q9H4G8 78 aa2.85□□□□□ -1.95
HERC6-207ENST00000506842 IGLV4-60A0A075B6I1 120 aa2.84□□□□□ -1.95
HERC6-207ENST00000506842 TRBV6-5A0A0K0K1A5 114 aa2.84□□□□□ -1.95
HERC6-207ENST00000506842 A8MWL6 223 aa2.84□□□□□ -1.95
HERC6-207ENST00000506842 LECT2O14960 151 aa2.84□□□□□ -1.95
HERC6-207ENST00000506842 NCR2O95944 276 aa2.84□□□□□ -1.95
HERC6-207ENST00000506842 HERVK_113P61574 105 aa2.84□□□□□ -1.95
HERC6-207ENST00000506842 CNBPP62633 177 aaKnown RBP2.84□□□□□ -1.95
HERC6-207ENST00000506842 CIRBPQ14011 172 aaKnown RBP2.84□□□□□ -1.95
HERC6-207ENST00000506842 SCXQ7RTU7 201 aa2.84□□□□□ -1.95
HERC6-207ENST00000506842 LINC00269Q8N2A0 174 aa2.84□□□□□ -1.95
HERC6-207ENST00000506842 C15orf56Q8N910 161 aa2.84□□□□□ -1.95
HERC6-207ENST00000506842 GATD1Q8NB37 220 aa2.84□□□□□ -1.95
HERC6-207ENST00000506842 TMEM243Q9BU79 118 aa2.84□□□□□ -1.95
HERC6-207ENST00000506842 RPP21Q9H633 154 aaKnown RBP2.84□□□□□ -1.95
HERC6-207ENST00000506842 SMKR1H3BMG3 65 aa2.83□□□□□ -1.96
HERC6-207ENST00000506842 OXTP01178 125 aa2.83□□□□□ -1.96
HERC6-207ENST00000506842 CRPP02741 224 aa2.83□□□□□ -1.96
HERC6-207ENST00000506842 TLX1NBP0CAT3 122 aa2.83□□□□□ -1.96
HERC6-207ENST00000506842 NKX2-5P52952 324 aaPredicted RBP2.83□□□□□ -1.96
HERC6-207ENST00000506842 POLR2KP53803 58 aaKnown RBP2.83□□□□□ -1.96
HERC6-207ENST00000506842 COTL1Q14019 142 aa2.83□□□□□ -1.96
HERC6-207ENST00000506842 LINC01551Q86U37 167 aa2.83□□□□□ -1.96
HERC6-207ENST00000506842 RNASE7Q9H1E1 156 aaKnown RBP2.83□□□□□ -1.96
HERC6-207ENST00000506842 SMDT1Q9H4I9 107 aa2.83□□□□□ -1.96
HERC6-207ENST00000506842 OSTCQ9NRP0 149 aa2.83□□□□□ -1.96
HERC6-207ENST00000506842 FAT1Q14517 4588 aa2.83□□□□□ -1.96
HERC6-207ENST00000506842 IGLV4-69A0A075B6H9 119 aa2.82□□□□□ -1.96
HERC6-207ENST00000506842 GATCO43716 136 aaKnown RBP2.82□□□□□ -1.96
HERC6-207ENST00000506842 MGPP08493 103 aa2.82□□□□□ -1.96
HERC6-207ENST00000506842 ESDP10768 282 aa2.82□□□□□ -1.96
HERC6-207ENST00000506842 HAMPP81172 84 aa2.82□□□□□ -1.96
HERC6-207ENST00000506842 ALKAL2Q6UX46 152 aa2.82□□□□□ -1.96
HERC6-207ENST00000506842 AKAP14Q86UN6 197 aa2.82□□□□□ -1.96
HERC6-207ENST00000506842 TSKUQ8WUA8 353 aa2.82□□□□□ -1.96
HERC6-207ENST00000506842 TMEM191AQ9H0A3 160 aa2.82□□□□□ -1.96
HERC6-207ENST00000506842 DMBT1Q9UGM3 2413 aaPredicted RBP2.81□□□□□ -1.96
HERC6-207ENST00000506842 ABCA13Q86UQ4 5058 aa2.81□□□□□ -1.96
HERC6-207ENST00000506842 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.81□□□□□ -1.96
HERC6-207ENST00000506842 TRBV27A0A0K0K1C4 114 aa2.81□□□□□ -1.96
HERC6-207ENST00000506842 A0A1B0GUT8 65 aa2.81□□□□□ -1.96
HERC6-207ENST00000506842 SDHAF1A6NFY7 115 aa2.81□□□□□ -1.96
HERC6-207ENST00000506842 I3L3M4 83 aa2.81□□□□□ -1.96
HERC6-207ENST00000506842 CCL25O15444 150 aa2.81□□□□□ -1.96
HERC6-207ENST00000506842 SRP19P09132 144 aaKnown RBP2.81□□□□□ -1.96
HERC6-207ENST00000506842 ZNF25P17030 456 aaPredicted RBP2.81□□□□□ -1.96
HERC6-207ENST00000506842 RAB4AP20338 218 aa2.81□□□□□ -1.96
HERC6-207ENST00000506842 TMEM241Q24JQ0 296 aa2.81□□□□□ -1.96
HERC6-207ENST00000506842 Q6ZVH6 145 aa2.81□□□□□ -1.96
HERC6-207ENST00000506842 SMIM15Q7Z3B0 74 aa2.81□□□□□ -1.96
HERC6-207ENST00000506842 MRPL52Q86TS9 123 aaKnown RBP2.81□□□□□ -1.96
HERC6-207ENST00000506842 RPL39LQ96EH5 51 aaKnown RBP2.81□□□□□ -1.96
HERC6-207ENST00000506842 V9GYV3 84 aa2.81□□□□□ -1.96
HERC6-207ENST00000506842 SRRM2Q9UQ35 2752 aaKnown RBP2.8□□□□□ -1.96
HERC6-207ENST00000506842 IGLV10-54A0A075B6I4 117 aa2.8□□□□□ -1.96
HERC6-207ENST00000506842 TRBV24-1A0A075B6N3 115 aa2.8□□□□□ -1.96
HERC6-207ENST00000506842 TRAV26-2A0A0B4J265 109 aa2.8□□□□□ -1.96
HERC6-207ENST00000506842 A0A1B0GVX0 72 aa2.8□□□□□ -1.96
HERC6-207ENST00000506842 LINC00862A6NCI5 91 aa2.8□□□□□ -1.96
HERC6-207ENST00000506842 ZNF727A8MUV8 499 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms