RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 TP53TG1Q9Y2A0 90 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 FN1P02751 2386 aaKnown RBP1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 CSMD2Q7Z408 3487 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 ARHGAP32A7KAX9 2087 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 APCP25054 2843 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 DOPEY2Q9Y3R5 2298 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 TNCP24821 2201 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 CR1P17927 2039 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 TRBV7-3A0A075B6L6 115 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 TRGV1A0A0A0MS02 117 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 TRAV26-2A0A0B4J265 109 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 TRAV4A0A0B4J268 109 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 TRGV4A0A0C4DH28 118 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 SDHAF1A6NFY7 115 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 SMKR1H3BMG3 65 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 NUPR1O60356 82 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 NPYP01303 97 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 C3orf79P0CE67 100 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 SPART-AS1P0CW21 52 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 POLR2KP53803 58 aaKnown RBP1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 LINC00315P59091 139 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 SEC11AP67812 179 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 DEFA6Q01524 100 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 COTL1Q14019 142 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 LINC01545Q5VT33 79 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 CFAP126Q5VTH2 177 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 LGALS9CQ6DKI2 356 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 TEX43Q6ZNM6 134 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 Q6ZQT7 251 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 C1orf158Q8N1D5 194 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 C11orf72Q8NBR9 251 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 TOMM6Q96B49 74 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 SCGB3A1Q96QR1 104 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 TIMM17AQ99595 171 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 PMCHL2Q9BQD1 86 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 GTSF1LQ9H1H1 148 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 VCX2Q9H322 139 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 NOP10Q9NPE3 64 aaKnown RBP1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 SPANXA1Q9NS26 97 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 PRO0255Q9UI72 69 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 HHLA3Q9XRX5 114 aa1.51□□□□□ -2.17
TOPBP1-205ENST00000506779 IGLV4-69A0A075B6H9 119 aa1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 IGLV2-18A0A075B6J9 118 aa1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 TRAV12-1A0A0B4J245 112 aa1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 PCP4L1A6NKN8 68 aa1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 F8VRH5 84 aa1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 H0Y8G0 127 aa1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 UBE2L6O14933 153 aa1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 DPM2O94777 84 aa1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 IGKCP01834 107 aa1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 ATP5G1P05496 136 aa1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 DDTP30046 118 aa1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 CXCL5P42830 114 aa1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 EMP1P54849 157 aa1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 HERVK_113P61574 105 aa1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 PMVKQ15126 192 aa1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 RBMY1FQ15415 496 aaKnown RBP1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 MRPL52Q86TS9 123 aaKnown RBP1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 BOD1L2Q8IYS8 172 aa1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 OR11H2Q8NH07 326 aa1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 RPL39LQ96EH5 51 aaKnown RBP1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 MIEN1Q9BRT3 115 aa1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 C2orf88Q9BSF0 95 aa1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 TIMM21Q9BVV7 248 aa1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 MRPL16Q9NX20 251 aaKnown RBP1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 UQCR10Q9UDW1 63 aa1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 CHTOPQ9Y3Y2 248 aaKnown RBP1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 CSDC2Q9Y534 153 aaKnown RBP1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 AKAP6Q13023 2319 aa1.5□□□□□ -2.17
TOPBP1-205ENST00000506779 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.5□□□□□ -2.173e-13■■■■■ 46.7
TOPBP1-205ENST00000506779 TRBV25-1A0A075B6N4 114 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 A0A087WX48 190 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 IGHV3-73A0A0B4J1V6 119 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 SPRR5A0A1B0GTR4 108 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 PLAC8L1A1L4L8 177 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 LRCOL1A6NCL2 159 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 IGIPA6NJ69 53 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 H3BNG1 76 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 H3BRM9 83 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 M0R143 59 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 SIVA1O15304 175 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 CCL25O15444 150 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 DLEU1O43261 78 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 IGLC3P0DOY3 106 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 DEFB130BP0DP73 79 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 DEFB130AP0DP74 79 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 ZNF25P17030 456 aaPredicted RBP1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 NMUP48645 174 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 SEC61GP60059 68 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 UBE2D3P61077 147 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 DAD1P61803 113 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 UBE2D2P62837 147 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 MRPS36P82909 103 aaKnown RBP1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 MRPL23Q16540 153 aaKnown RBP1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 DEFB135Q30KP9 77 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 SPATA45Q537H7 98 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 DEFB121Q5J5C9 76 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 FAM222AQ5U5X8 452 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 AMMECR1LQ6DCA0 310 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 SLC25A34Q6PIV7 304 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms