RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 IGHV3-64A0A075B6Q5 118 aa1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 TRAV7A0A075B6U4 112 aa1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 SMIM31A0A1B0GVY4 71 aa1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 FABP5P3A8MUU1 101 aa1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 H3BRN7 92 aa1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 GABARAPH6UMI1 98 aa1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 PDE6DO43924 150 aa1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 SSSCA1O60232 199 aa1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 ATG12O94817 140 aa1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 CCL18P55774 89 aa1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 DEFA1P59665 94 aa1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 TMEM258P61165 79 aa1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 RRAS2P62070 204 aaPredicted RBP1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 RHOBP62745 196 aa1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 SLC38A11Q08AI6 406 aa1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 SMCO1Q147U7 214 aa1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 ESRGQ1W209 222 aa1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 SPANXN5Q5MJ07 72 aa1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 IBA57Q5T440 356 aaKnown RBP1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 Q6ZRN7 208 aaPredicted RBP1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 Q6ZTI0 123 aa1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 CLVS1Q8IUQ0 354 aaPredicted RBP1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 C15orf53Q8NAA6 179 aa1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 TERB2Q8NHR7 220 aa1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 SMIM4Q8WVI0 70 aa1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 TOMM6Q96B49 74 aa1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 RPRMQ9NS64 109 aa1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 PRO2289Q9P1D8 64 aa1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 SRRM2Q9UQ35 2752 aaKnown RBP1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 DNAH8Q96JB1 4490 aa1.49□□□□□ -2.17
TRAPPC11-205ENST00000506426 LRP1Q07954 4544 aaKnown RBP1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 TRGV2A0A075B6R0 118 aa1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 TRAV9-1A0A075B6T8 112 aa1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 A0A087WXM4 84 aa1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 TRGV1A0A0A0MS02 117 aa1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 TRAV5A0A0B4J249 113 aa1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 TRAV12-3A0A0B4J271 114 aa1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 A8MTW9 85 aa1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 SNRPGP15A8MWD9 76 aa1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 H3BQ15 152 aa1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 H7C2G1 150 aa1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 J3QQQ9 107 aa1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 M0R3E3 92 aa1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 PPBPP02775 128 aa1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 IL5P05113 134 aa1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 AKAIN1P0CW23 69 aa1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 CYP2G1PQ6ZSU1 146 aa1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 WFDC10BQ8IUB3 73 aa1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 TMEM229BQ8NBD8 167 aa1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 Q8TAT8 98 aa1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 TMEM263Q8WUH6 116 aaKnown RBP1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 AP3S1Q92572 193 aa1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 TRGV9Q99603 122 aa1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 TXNDC17Q9BRA2 123 aa1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 DERL1Q9BUN8 251 aa1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 HIGD1AQ9Y241 93 aa1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 U3KQ87 197 aa1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 MUC4Q99102 2169 aa1.48□□□□□ -2.17
TRAPPC11-205ENST00000506426 RNF213Q63HN8 5207 aa1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 A0A087WTM6 91 aa1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 IGKV2-40A0A087WW87 121 aaPredicted RBP1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 TMSB15BA0A087X1C1 80 aa1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 UBE2L5PA0A1B0GUS4 154 aa1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 H7BYZ3 331 aa1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 PITX3O75364 302 aa1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 HYPMO75409 117 aa1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 IGKV2D-40P01614 121 aaPredicted RBP1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 FABP1P07148 127 aa1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 SFTA3P0C7M3 94 aa1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 METTL15P1P0C7V9 234 aa1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 PYYP10082 97 aa1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 RPL7P18124 248 aaKnown RBP1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 S100A5P33763 92 aa1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 WFDC2Q14508 124 aa1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 SURF2Q15527 256 aaPredicted RBP1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 PATE2Q6UY27 113 aa1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 LINC00305Q7Z4B0 112 aa1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 S100A7AQ86SG5 101 aa1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 KTN1-AS1Q86SY8 53 aa1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 EXOC3-AS1Q8N2X6 119 aa1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 MGST2Q99735 147 aa1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 PRRT1Q99946 306 aa1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 UQCC1Q9NVA1 299 aa1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 PSENENQ9NZ42 101 aa1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 TIMM8BQ9Y5J9 83 aaPredicted RBP1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 V9GYH0 126 aa1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 FAT3Q8TDW7 4589 aa1.47□□□□□ -2.17
TRAPPC11-205ENST00000506426 A0A0G2JQZ4 141 aa1.46□□□□□ -2.18
TRAPPC11-205ENST00000506426 HMSDA8MTL9 139 aa1.46□□□□□ -2.18
TRAPPC11-205ENST00000506426 CST7O76096 145 aa1.46□□□□□ -2.18
TRAPPC11-205ENST00000506426 SFT2D2O95562 160 aa1.46□□□□□ -2.18
TRAPPC11-205ENST00000506426 IGHV3-30P01768 117 aa1.46□□□□□ -2.18
TRAPPC11-205ENST00000506426 IGHV3-33P01772 117 aa1.46□□□□□ -2.18
TRAPPC11-205ENST00000506426 OR4E1P0C645 316 aa1.46□□□□□ -2.18
TRAPPC11-205ENST00000506426 IGLC2P0DOY2 106 aa1.46□□□□□ -2.18
TRAPPC11-205ENST00000506426 IGHV3-30-5P0DP03 117 aa1.46□□□□□ -2.18
TRAPPC11-205ENST00000506426 RNASE4P34096 147 aaKnown RBP1.46□□□□□ -2.18
TRAPPC11-205ENST00000506426 MRPS10P82664 201 aaKnown RBP1.46□□□□□ -2.18
TRAPPC11-205ENST00000506426 SAMD13Q5VXD3 122 aa1.46□□□□□ -2.18
TRAPPC11-205ENST00000506426 MIC13Q5XKP0 118 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms