RNA–Protein interactions for RNA: ENST00000505944.5

NR1I3-221, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-221ENST00000505944 HIST1H2BJP06899 126 aa4.52□□□□□ -1.69
NR1I3-221ENST00000505944 HIST1H2BOP23527 126 aa4.52□□□□□ -1.69
NR1I3-221ENST00000505944 HIST1H2BBP33778 126 aa4.52□□□□□ -1.69
NR1I3-221ENST00000505944 HIST1H2BDP58876 126 aa4.52□□□□□ -1.69
NR1I3-221ENST00000505944 HIST1H2BCP62807 126 aa4.52□□□□□ -1.69
NR1I3-221ENST00000505944 REG3AQ06141 175 aa4.52□□□□□ -1.69
NR1I3-221ENST00000505944 HIST2H2BEQ16778 126 aa4.52□□□□□ -1.69
NR1I3-221ENST00000505944 TMEM97Q5BJF2 176 aa4.52□□□□□ -1.69
NR1I3-221ENST00000505944 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.52□□□□□ -1.69
NR1I3-221ENST00000505944 C2orf66Q6UXQ4 117 aa4.52□□□□□ -1.69
NR1I3-221ENST00000505944 LINC00173Q6ZV60 143 aa4.52□□□□□ -1.69
NR1I3-221ENST00000505944 FAM19A2Q8N3H0 131 aa4.52□□□□□ -1.69
NR1I3-221ENST00000505944 HIST1H2BHQ93079 126 aa4.52□□□□□ -1.69
NR1I3-221ENST00000505944 HIST1H2BNQ99877 126 aa4.52□□□□□ -1.69
NR1I3-221ENST00000505944 HIST1H2BMQ99879 126 aa4.52□□□□□ -1.69
NR1I3-221ENST00000505944 PKHD1L1Q86WI1 4243 aa4.51□□□□□ -1.69
NR1I3-221ENST00000505944 XCL1P47992 114 aa4.51□□□□□ -1.69
NR1I3-221ENST00000505944 HAMPP81172 84 aa4.51□□□□□ -1.69
NR1I3-221ENST00000505944 KRTAP19-4Q3LI73 84 aa4.51□□□□□ -1.69
NR1I3-221ENST00000505944 PDZD11Q5EBL8 140 aa4.51□□□□□ -1.69
NR1I3-221ENST00000505944 DGAT2L7PQ6IED9 249 aa4.51□□□□□ -1.69
NR1I3-221ENST00000505944 BAALCQ8WXS3 180 aa4.51□□□□□ -1.69
NR1I3-221ENST00000505944 TMEM101Q96IK0 257 aa4.51□□□□□ -1.69
NR1I3-221ENST00000505944 LRP1Q07954 4544 aaKnown RBP4.51□□□□□ -1.69
NR1I3-221ENST00000505944 IGLV4-3A0A075B6K6 122 aa4.5□□□□□ -1.69
NR1I3-221ENST00000505944 GAGE12HA6NDE8 117 aa4.5□□□□□ -1.69
NR1I3-221ENST00000505944 IFITM10A6NMD0 228 aa4.5□□□□□ -1.69
NR1I3-221ENST00000505944 LINC00614P0C842 121 aa4.5□□□□□ -1.69
NR1I3-221ENST00000505944 MAJINQ3KP22 176 aa4.5□□□□□ -1.69
NR1I3-221ENST00000505944 ORMDL2Q53FV1 153 aa4.5□□□□□ -1.69
NR1I3-221ENST00000505944 ZNF664Q8N3J9 261 aa4.5□□□□□ -1.69
NR1I3-221ENST00000505944 CHCHD10Q8WYQ3 142 aaPredicted RBP4.5□□□□□ -1.69
NR1I3-221ENST00000505944 TOMM6Q96B49 74 aa4.5□□□□□ -1.69
NR1I3-221ENST00000505944 SCGB3A1Q96QR1 104 aa4.5□□□□□ -1.69
NR1I3-221ENST00000505944 CDC42SE2Q9NRR3 84 aa4.5□□□□□ -1.69
NR1I3-221ENST00000505944 CYSLTR1Q9Y271 337 aa4.5□□□□□ -1.69
NR1I3-221ENST00000505944 LINC00959A0A1B0GUT2 108 aa4.49□□□□□ -1.69
NR1I3-221ENST00000505944 A0A1B0GUV1 79 aa4.49□□□□□ -1.69
NR1I3-221ENST00000505944 C1orf196B1AJZ1 125 aa4.49□□□□□ -1.69
NR1I3-221ENST00000505944 H0Y8G0 127 aa4.49□□□□□ -1.69
NR1I3-221ENST00000505944 CCL25O15444 150 aa4.49□□□□□ -1.69
NR1I3-221ENST00000505944 FABP4P15090 132 aa4.49□□□□□ -1.69
NR1I3-221ENST00000505944 NDUFA6P56556 154 aa4.49□□□□□ -1.69
NR1I3-221ENST00000505944 Q6ZSA8 131 aa4.49□□□□□ -1.69
NR1I3-221ENST00000505944 MRPL52Q86TS9 123 aaKnown RBP4.49□□□□□ -1.69
NR1I3-221ENST00000505944 Q8N814 137 aa4.49□□□□□ -1.69
NR1I3-221ENST00000505944 LINC00526Q96FQ7 95 aa4.49□□□□□ -1.69
NR1I3-221ENST00000505944 C1orf43Q9BWL3 253 aa4.49□□□□□ -1.69
NR1I3-221ENST00000505944 SPANXA1Q9NS26 97 aa4.49□□□□□ -1.69
NR1I3-221ENST00000505944 PRR34Q9NV39 138 aa4.49□□□□□ -1.69
NR1I3-221ENST00000505944 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.48□□□□□ -1.69
NR1I3-221ENST00000505944 TRAV8-3A0A0A6YYJ7 113 aa4.48□□□□□ -1.69
NR1I3-221ENST00000505944 LINC01546A6NGU7 62 aa4.48□□□□□ -1.69
NR1I3-221ENST00000505944 IGIPA6NJ69 53 aa4.48□□□□□ -1.69
NR1I3-221ENST00000505944 HSBP1O75506 76 aa4.48□□□□□ -1.69
NR1I3-221ENST00000505944 HBDP02042 147 aa4.48□□□□□ -1.69
NR1I3-221ENST00000505944 ZNF25P17030 456 aaPredicted RBP4.48□□□□□ -1.69
NR1I3-221ENST00000505944 PKIAP61925 76 aa4.48□□□□□ -1.69
NR1I3-221ENST00000505944 Q0VG73 95 aa4.48□□□□□ -1.69
NR1I3-221ENST00000505944 LINC01620Q4KN68 170 aa4.48□□□□□ -1.69
NR1I3-221ENST00000505944 HIGD2BQ4VC39 106 aa4.48□□□□□ -1.69
NR1I3-221ENST00000505944 KRTAP26-1Q6PEX3 210 aa4.48□□□□□ -1.69
NR1I3-221ENST00000505944 C5orf38Q86SI9 138 aa4.48□□□□□ -1.69
NR1I3-221ENST00000505944 TMEM18Q96B42 140 aa4.48□□□□□ -1.69
NR1I3-221ENST00000505944 TMEM141Q96I45 108 aa4.48□□□□□ -1.69
NR1I3-221ENST00000505944 TM2D2Q9BX73 214 aa4.48□□□□□ -1.69
NR1I3-221ENST00000505944 KRTAP4-9Q9BYQ8 210 aa4.48□□□□□ -1.69
NR1I3-221ENST00000505944 LRCOL1A6NCL2 159 aa4.47□□□□□ -1.69
NR1I3-221ENST00000505944 USP17L23D6RBM5 183 aa4.47□□□□□ -1.69
NR1I3-221ENST00000505944 H7C423 109 aa4.47□□□□□ -1.69
NR1I3-221ENST00000505944 COX6A2Q02221 97 aa4.47□□□□□ -1.69
NR1I3-221ENST00000505944 MIAQ16674 131 aa4.47□□□□□ -1.69
NR1I3-221ENST00000505944 PMCHL2Q9BQD1 86 aa4.47□□□□□ -1.69
NR1I3-221ENST00000505944 TIMM21Q9BVV7 248 aa4.47□□□□□ -1.69
NR1I3-221ENST00000505944 A0A0J9YXV3 536 aa4.46□□□□□ -1.7
NR1I3-221ENST00000505944 RAB5BP61020 215 aa4.46□□□□□ -1.7
NR1I3-221ENST00000505944 MRPS36P82909 103 aaKnown RBP4.46□□□□□ -1.7
NR1I3-221ENST00000505944 FOXI1Q12951 378 aa4.46□□□□□ -1.7
NR1I3-221ENST00000505944 PET117Q6UWS5 81 aa4.46□□□□□ -1.7
NR1I3-221ENST00000505944 Q6ZN92 141 aa4.46□□□□□ -1.7
NR1I3-221ENST00000505944 TEX43Q6ZNM6 134 aa4.46□□□□□ -1.7
NR1I3-221ENST00000505944 CHCHD1Q96BP2 118 aaKnown RBP4.46□□□□□ -1.7
NR1I3-221ENST00000505944 VCX2Q9H322 139 aa4.46□□□□□ -1.7
NR1I3-221ENST00000505944 FAM30AQ9NZY2 134 aa4.46□□□□□ -1.7
NR1I3-221ENST00000505944 COX11Q9Y6N1 276 aa4.46□□□□□ -1.7
NR1I3-221ENST00000505944 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.45□□□□□ -1.7
NR1I3-221ENST00000505944 PRSS1P07477 247 aa4.45□□□□□ -1.7
NR1I3-221ENST00000505944 UBE2D1P51668 147 aa4.45□□□□□ -1.7
NR1I3-221ENST00000505944 SS18Q15532 418 aa4.45□□□□□ -1.7
NR1I3-221ENST00000505944 LINC00242Q5T6M2 205 aa4.45□□□□□ -1.7
NR1I3-221ENST00000505944 ERASQ7Z444 233 aa4.45□□□□□ -1.7
NR1I3-221ENST00000505944 C15orf56Q8N910 161 aa4.45□□□□□ -1.7
NR1I3-221ENST00000505944 RMI2Q96E14 147 aa4.45□□□□□ -1.7
NR1I3-221ENST00000505944 AMELXQ99217 191 aa4.45□□□□□ -1.7
NR1I3-221ENST00000505944 TIMM17AQ99595 171 aa4.45□□□□□ -1.7
NR1I3-221ENST00000505944 CST9LQ9H4G1 147 aa4.45□□□□□ -1.7
NR1I3-221ENST00000505944 PYGO1Q9Y3Y4 419 aa4.45□□□□□ -1.7
NR1I3-221ENST00000505944 IGHV3-64A0A075B6Q5 118 aa4.44□□□□□ -1.7
NR1I3-221ENST00000505944 A4D1N5 150 aa4.44□□□□□ -1.7
NR1I3-221ENST00000505944 K7EMI3 77 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms