RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 CHCHD7Q9BUK0 85 aa3.14□□□□□ -1.91
CDH9-203ENST00000505045 UQCR10Q9UDW1 63 aa3.14□□□□□ -1.91
CDH9-203ENST00000505045 IGLV4-60A0A075B6I1 120 aa3.14□□□□□ -1.91
CDH9-203ENST00000505045 IGLV5-39A0A0G2JS06 123 aa3.14□□□□□ -1.91
CDH9-203ENST00000505045 USP17L23D6RBM5 183 aa3.14□□□□□ -1.91
CDH9-203ENST00000505045 TMEM262E9PQX1 116 aa3.14□□□□□ -1.91
CDH9-203ENST00000505045 PANO1I0J062 215 aa3.14□□□□□ -1.91
CDH9-203ENST00000505045 CCL25O15444 150 aa3.14□□□□□ -1.91
CDH9-203ENST00000505045 SERF1AO75920 110 aa3.14□□□□□ -1.91
CDH9-203ENST00000505045 P01737 135 aa3.14□□□□□ -1.91
CDH9-203ENST00000505045 HNRNPA3P51991 378 aaKnown RBP3.14□□□□□ -1.91
CDH9-203ENST00000505045 FOXA3P55318 350 aaPredicted RBP3.14□□□□□ -1.91
CDH9-203ENST00000505045 RPS20P60866 119 aaKnown RBP3.14□□□□□ -1.91
CDH9-203ENST00000505045 UBE2V1Q13404 147 aa3.14□□□□□ -1.91
CDH9-203ENST00000505045 SPATA45Q537H7 98 aa3.14□□□□□ -1.91
CDH9-203ENST00000505045 LYZL1Q6UWQ5 148 aa3.14□□□□□ -1.91
CDH9-203ENST00000505045 LINC01551Q86U37 167 aa3.14□□□□□ -1.91
CDH9-203ENST00000505045 STPG4Q8N801 248 aa3.14□□□□□ -1.91
CDH9-203ENST00000505045 C20orf203Q8NBC4 194 aa3.14□□□□□ -1.91
CDH9-203ENST00000505045 PRR34Q9NV39 138 aa3.14□□□□□ -1.91
CDH9-203ENST00000505045 LAMTOR2Q9Y2Q5 125 aa3.14□□□□□ -1.91
CDH9-203ENST00000505045 PAM16Q9Y3D7 125 aa3.14□□□□□ -1.91
CDH9-203ENST00000505045 HMCN2Q8NDA2 5059 aa3.13□□□□□ -1.91
CDH9-203ENST00000505045 IGLV10-54A0A075B6I4 117 aa3.13□□□□□ -1.91
CDH9-203ENST00000505045 GAS8-AS1O95177 125 aa3.13□□□□□ -1.91
CDH9-203ENST00000505045 CRPP02741 224 aa3.13□□□□□ -1.91
CDH9-203ENST00000505045 PRSS1P07477 247 aa3.13□□□□□ -1.91
CDH9-203ENST00000505045 IGLC3P0DOY3 106 aa3.13□□□□□ -1.91
CDH9-203ENST00000505045 NTF3P20783 257 aa3.13□□□□□ -1.91
CDH9-203ENST00000505045 BAGE3Q86Y29 109 aa3.13□□□□□ -1.91
CDH9-203ENST00000505045 LINC00269Q8N2A0 174 aa3.13□□□□□ -1.91
CDH9-203ENST00000505045 OCC1Q8TAD7 63 aa3.13□□□□□ -1.91
CDH9-203ENST00000505045 CIRBP-AS1Q8TBR5 109 aa3.13□□□□□ -1.91
CDH9-203ENST00000505045 RPL39LQ96EH5 51 aaKnown RBP3.13□□□□□ -1.91
CDH9-203ENST00000505045 SMIM12Q96EX1 92 aa3.13□□□□□ -1.91
CDH9-203ENST00000505045 ALKBH7Q9BT30 221 aaPredicted RBP3.13□□□□□ -1.91
CDH9-203ENST00000505045 CNFNQ9BYD5 112 aa3.13□□□□□ -1.91
CDH9-203ENST00000505045 TRBV25-1A0A075B6N4 114 aa3.12□□□□□ -1.91
CDH9-203ENST00000505045 PPBPP02775 128 aa3.12□□□□□ -1.91
CDH9-203ENST00000505045 MT-ND6P03923 174 aa3.12□□□□□ -1.91
CDH9-203ENST00000505045 SMIM17P0DL12 118 aa3.12□□□□□ -1.91
CDH9-203ENST00000505045 KRTDAPP60985 99 aa3.12□□□□□ -1.91
CDH9-203ENST00000505045 WDR73Q6P4I2 378 aa3.12□□□□□ -1.91
CDH9-203ENST00000505045 Q6ZN92 141 aa3.12□□□□□ -1.91
CDH9-203ENST00000505045 SMIM15Q7Z3B0 74 aa3.12□□□□□ -1.91
CDH9-203ENST00000505045 GATD1Q8NB37 220 aa3.12□□□□□ -1.91
CDH9-203ENST00000505045 RMI2Q96E14 147 aa3.12□□□□□ -1.91
CDH9-203ENST00000505045 CHAC1Q9BUX1 264 aa3.12□□□□□ -1.91
CDH9-203ENST00000505045 GNB1LQ9BYB4 327 aa3.12□□□□□ -1.91
CDH9-203ENST00000505045 DPH3P1Q9H4G8 78 aa3.12□□□□□ -1.91
CDH9-203ENST00000505045 RPP21Q9H633 154 aaKnown RBP3.12□□□□□ -1.91
CDH9-203ENST00000505045 IGHV1-24A0A0C4DH33 117 aa3.12□□□□□ -1.91
CDH9-203ENST00000505045 CACNG7P62955 275 aa3.12□□□□□ -1.91
CDH9-203ENST00000505045 REG3AQ06141 175 aa3.12□□□□□ -1.91
CDH9-203ENST00000505045 PMCHL1Q16048 86 aa3.12□□□□□ -1.91
CDH9-203ENST00000505045 MIAQ16674 131 aa3.12□□□□□ -1.91
CDH9-203ENST00000505045 RASL11AQ6T310 242 aa3.12□□□□□ -1.91
CDH9-203ENST00000505045 F2Z2F3 143 aa3.11□□□□□ -1.91
CDH9-203ENST00000505045 C3orf79P0CE67 100 aa3.11□□□□□ -1.91
CDH9-203ENST00000505045 HINT1P49773 126 aaPredicted RBP3.11□□□□□ -1.91
CDH9-203ENST00000505045 BORCS7Q96B45 105 aa3.11□□□□□ -1.91
CDH9-203ENST00000505045 TMEM243Q9BU79 118 aa3.11□□□□□ -1.91
CDH9-203ENST00000505045 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.1□□□□□ -1.91
CDH9-203ENST00000505045 IGKV2-29A2NJV5 120 aaPredicted RBP3.1□□□□□ -1.91
CDH9-203ENST00000505045 H7C1H1 209 aa3.1□□□□□ -1.91
CDH9-203ENST00000505045 CHTF8P0CG12 524 aa3.1□□□□□ -1.91
CDH9-203ENST00000505045 AMTP48728 403 aa3.1□□□□□ -1.91
CDH9-203ENST00000505045 TMEM136Q6ZRR5 245 aa3.1□□□□□ -1.91
CDH9-203ENST00000505045 C15orf56Q8N910 161 aa3.1□□□□□ -1.91
CDH9-203ENST00000505045 PGLYRP4Q96LB8 373 aa3.1□□□□□ -1.91
CDH9-203ENST00000505045 OSTCQ9NRP0 149 aa3.1□□□□□ -1.91
CDH9-203ENST00000505045 V9GYV3 84 aa3.1□□□□□ -1.91
CDH9-203ENST00000505045 TNXBP22105 4242 aa3.1□□□□□ -1.91
CDH9-203ENST00000505045 IGKV3OR2-268A0A0C4DH90 116 aa3.09□□□□□ -1.91
CDH9-203ENST00000505045 PMCHP20382 165 aa3.09□□□□□ -1.91
CDH9-203ENST00000505045 TMEM97Q5BJF2 176 aa3.09□□□□□ -1.91
CDH9-203ENST00000505045 TSKUQ8WUA8 353 aa3.09□□□□□ -1.91
CDH9-203ENST00000505045 VPS25Q9BRG1 176 aa3.09□□□□□ -1.91
CDH9-203ENST00000505045 NAT8BQ9UHF3 227 aa3.09□□□□□ -1.91
CDH9-203ENST00000505045 CHTOPQ9Y3Y2 248 aaKnown RBP3.09□□□□□ -1.91
CDH9-203ENST00000505045 A0A1B0GUV1 79 aa3.09□□□□□ -1.92
CDH9-203ENST00000505045 hDV102S1A0JD36 115 aa3.09□□□□□ -1.92
CDH9-203ENST00000505045 FAM231BA6NCW3 169 aa3.09□□□□□ -1.92
CDH9-203ENST00000505045 SDHAF1A6NFY7 115 aa3.09□□□□□ -1.92
CDH9-203ENST00000505045 HIGD1CA8MV81 97 aa3.09□□□□□ -1.92
CDH9-203ENST00000505045 NCR2O95944 276 aa3.09□□□□□ -1.92
CDH9-203ENST00000505045 APCSP02743 223 aa3.09□□□□□ -1.92
CDH9-203ENST00000505045 VAMP3Q15836 100 aa3.09□□□□□ -1.92
CDH9-203ENST00000505045 C14orf177Q52M58 125 aa3.09□□□□□ -1.92
CDH9-203ENST00000505045 UBR4Q5T4S7 5183 aa3.09□□□□□ -1.92
CDH9-203ENST00000505045 PET117Q6UWS5 81 aa3.09□□□□□ -1.92
CDH9-203ENST00000505045 SDIM1Q6ZPB5 146 aa3.09□□□□□ -1.92
CDH9-203ENST00000505045 FAM231DQ6ZW35 169 aa3.09□□□□□ -1.92
CDH9-203ENST00000505045 C9orf163Q8N9P6 203 aa3.09□□□□□ -1.92
CDH9-203ENST00000505045 RNF185Q96GF1 192 aa3.09□□□□□ -1.92
CDH9-203ENST00000505045 CST9LQ9H4G1 147 aa3.09□□□□□ -1.92
CDH9-203ENST00000505045 SMIM27A0A1W2PRY6 76 aa3.08□□□□□ -1.92
CDH9-203ENST00000505045 SMKR1H3BMG3 65 aa3.08□□□□□ -1.92
CDH9-203ENST00000505045 TAX1BP3O14907 124 aa3.08□□□□□ -1.92
CDH9-203ENST00000505045 UBE2L6O14933 153 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms