RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 A6NDX4 124 aa5.49□□□□□ -1.53
NEDD9-208ENST00000504387 SMIM9A6NGZ8 99 aa5.49□□□□□ -1.53
NEDD9-208ENST00000504387 B4DSR2 109 aa5.49□□□□□ -1.53
NEDD9-208ENST00000504387 LINC00242Q5T6M2 205 aa5.49□□□□□ -1.53
NEDD9-208ENST00000504387 MIR7-3HGQ8N6C7 128 aa5.49□□□□□ -1.53
NEDD9-208ENST00000504387 DNAJC30Q96LL9 226 aa5.49□□□□□ -1.53
NEDD9-208ENST00000504387 TRAV23DV6A0A075B6W5 121 aa5.49□□□□□ -1.53
NEDD9-208ENST00000504387 FAM240AA0A1B0GVK7 77 aa5.49□□□□□ -1.53
NEDD9-208ENST00000504387 TRACP01848 142 aa5.49□□□□□ -1.53
NEDD9-208ENST00000504387 COX7CP15954 63 aa5.49□□□□□ -1.53
NEDD9-208ENST00000504387 LINC00846Q9NV44 126 aa5.49□□□□□ -1.53
NEDD9-208ENST00000504387 PAX4O43316 350 aa5.48□□□□□ -1.53
NEDD9-208ENST00000504387 PLA2G2AP14555 144 aa5.48□□□□□ -1.53
NEDD9-208ENST00000504387 MALP21145 153 aa5.48□□□□□ -1.53
NEDD9-208ENST00000504387 J3KT08 172 aa5.48□□□□□ -1.53
NEDD9-208ENST00000504387 CRPP02741 224 aa5.48□□□□□ -1.53
NEDD9-208ENST00000504387 PRR3P79522 188 aaKnown RBP5.48□□□□□ -1.53
NEDD9-208ENST00000504387 LINC00526Q96FQ7 95 aa5.48□□□□□ -1.53
NEDD9-208ENST00000504387 K7EQG2 157 aa5.48□□□□□ -1.53
NEDD9-208ENST00000504387 NDUFA1O15239 70 aa5.48□□□□□ -1.53
NEDD9-208ENST00000504387 RPL36AP83881 106 aaKnown RBP5.48□□□□□ -1.53
NEDD9-208ENST00000504387 CLPSL2Q6UWE3 100 aa5.48□□□□□ -1.53
NEDD9-208ENST00000504387 C5orf38Q86SI9 138 aa5.48□□□□□ -1.53
NEDD9-208ENST00000504387 LINC00337Q8N6G1 96 aa5.48□□□□□ -1.53
NEDD9-208ENST00000504387 RPL36ALQ969Q0 106 aaKnown RBP5.48□□□□□ -1.53
NEDD9-208ENST00000504387 C22orf24Q9Y442 160 aa5.48□□□□□ -1.53
NEDD9-208ENST00000504387 GCN1Q92616 2671 aaKnown RBP5.47□□□□□ -1.53
NEDD9-208ENST00000504387 SND1-IT1Q9HBX3 110 aa5.47□□□□□ -1.53
NEDD9-208ENST00000504387 LOC100131303A0A0U1RQF7 123 aa5.47□□□□□ -1.53
NEDD9-208ENST00000504387 RBMY1BA6NDE4 496 aaKnown RBP5.47□□□□□ -1.53
NEDD9-208ENST00000504387 RBMY1EA6NEQ0 496 aaKnown RBP5.47□□□□□ -1.53
NEDD9-208ENST00000504387 RBMY1DP0C7P1 496 aaKnown RBP5.47□□□□□ -1.53
NEDD9-208ENST00000504387 Q96MF0 132 aa5.47□□□□□ -1.53
NEDD9-208ENST00000504387 PYGO1Q9Y3Y4 419 aa5.47□□□□□ -1.53
NEDD9-208ENST00000504387 APCP25054 2843 aa5.47□□□□□ -1.53
NEDD9-208ENST00000504387 SMIM1B2RUZ4 78 aa5.46□□□□□ -1.53
NEDD9-208ENST00000504387 SMIM11BQ8TCY0 68 aa5.46□□□□□ -1.53
NEDD9-208ENST00000504387 AKAP9Q99996 3911 aa5.46□□□□□ -1.53
NEDD9-208ENST00000504387 CXCL5P42830 114 aa5.46□□□□□ -1.54
NEDD9-208ENST00000504387 SPANXA1Q9NS26 97 aa5.46□□□□□ -1.54
NEDD9-208ENST00000504387 OXTP01178 125 aa5.46□□□□□ -1.54
NEDD9-208ENST00000504387 ACYP1P07311 99 aa5.46□□□□□ -1.54
NEDD9-208ENST00000504387 DEFB121Q5J5C9 76 aa5.46□□□□□ -1.54
NEDD9-208ENST00000504387 FLNAP21333 2647 aaKnown RBP5.45□□□□□ -1.54
NEDD9-208ENST00000504387 FAM19A1Q7Z5A9 133 aa5.45□□□□□ -1.54
NEDD9-208ENST00000504387 C2orf48Q96LS8 159 aa5.45□□□□□ -1.54
NEDD9-208ENST00000504387 UBE2L6O14933 153 aa5.45□□□□□ -1.54
NEDD9-208ENST00000504387 C5orf47Q569G3 176 aa5.45□□□□□ -1.54
NEDD9-208ENST00000504387 HIST2H2BCQ6DN03 193 aa5.45□□□□□ -1.54
NEDD9-208ENST00000504387 USP17L23D6RBM5 183 aa5.44□□□□□ -1.54
NEDD9-208ENST00000504387 RPL35AP18077 110 aaKnown RBP5.44□□□□□ -1.54
NEDD9-208ENST00000504387 Q6ZTI0 123 aa5.44□□□□□ -1.54
NEDD9-208ENST00000504387 A0A096LPF7 62 aa5.44□□□□□ -1.54
NEDD9-208ENST00000504387 IGLV1-40P01703 118 aa5.44□□□□□ -1.54
NEDD9-208ENST00000504387 INAFM2P0DMQ5 153 aa5.44□□□□□ -1.54
NEDD9-208ENST00000504387 ZNF415Q09FC8 603 aa5.44□□□□□ -1.54
NEDD9-208ENST00000504387 BEAN1Q3B7T3 259 aa5.44□□□□□ -1.54
NEDD9-208ENST00000504387 C20orf197Q8N268 126 aa5.44□□□□□ -1.54
NEDD9-208ENST00000504387 ATOX1O00244 68 aa5.44□□□□□ -1.54
NEDD9-208ENST00000504387 PSMB8P28062 276 aa5.44□□□□□ -1.54
NEDD9-208ENST00000504387 RPL18AQ02543 176 aaKnown RBP5.44□□□□□ -1.54
NEDD9-208ENST00000504387 NTM-AS1Q6ZSK4 140 aa5.44□□□□□ -1.54
NEDD9-208ENST00000504387 LINC01561Q8N1V8 128 aa5.44□□□□□ -1.54
NEDD9-208ENST00000504387 IMUPQ9GZP8 106 aa5.44□□□□□ -1.54
NEDD9-208ENST00000504387 IGKV2-28A0A075B6P5 120 aa5.43□□□□□ -1.54
NEDD9-208ENST00000504387 IGKV2D-28P01615 120 aa5.43□□□□□ -1.54
NEDD9-208ENST00000504387 ENHOQ6UWT2 76 aa5.43□□□□□ -1.54
NEDD9-208ENST00000504387 LINC01356Q8N9X3 169 aa5.43□□□□□ -1.54
NEDD9-208ENST00000504387 STHQ8IWL8 128 aa5.43□□□□□ -1.54
NEDD9-208ENST00000504387 DPH3Q96FX2 82 aa5.43□□□□□ -1.54
NEDD9-208ENST00000504387 A8MTW9 85 aa5.42□□□□□ -1.54
NEDD9-208ENST00000504387 NOP10Q9NPE3 64 aaKnown RBP5.42□□□□□ -1.54
NEDD9-208ENST00000504387 ITPR3Q14573 2671 aa5.42□□□□□ -1.54
NEDD9-208ENST00000504387 SETXQ7Z333 2677 aaKnown RBP5.42□□□□□ -1.54
NEDD9-208ENST00000504387 TRGV2A0A075B6R0 118 aa5.42□□□□□ -1.54
NEDD9-208ENST00000504387 FHL2Q14192 279 aa5.42□□□□□ -1.54
NEDD9-208ENST00000504387 H3BUA1 57 aa5.42□□□□□ -1.54
NEDD9-208ENST00000504387 GHRHP01286 108 aa5.42□□□□□ -1.54
NEDD9-208ENST00000504387 CCL18P55774 89 aa5.42□□□□□ -1.54
NEDD9-208ENST00000504387 KRTAP10-9P60411 292 aa5.42□□□□□ -1.54
NEDD9-208ENST00000504387 K7EMT4 169 aa5.41□□□□□ -1.54
NEDD9-208ENST00000504387 RPL28P46779 137 aaKnown RBP5.41□□□□□ -1.54
NEDD9-208ENST00000504387 SNURFQ9Y675 71 aa5.41□□□□□ -1.54
NEDD9-208ENST00000504387 XCL1P47992 114 aa5.41□□□□□ -1.54
NEDD9-208ENST00000504387 LRRC75A-AS1Q8N1F1 130 aa5.41□□□□□ -1.54
NEDD9-208ENST00000504387 WFDC10AQ9H1F0 79 aa5.41□□□□□ -1.54
NEDD9-208ENST00000504387 IGLV4-60A0A075B6I1 120 aa5.4□□□□□ -1.54
NEDD9-208ENST00000504387 TIMM17BO60830 172 aa5.4□□□□□ -1.54
NEDD9-208ENST00000504387 SERP2Q8N6R1 65 aa5.4□□□□□ -1.54
NEDD9-208ENST00000504387 TRAV13-2A0A0B4J235 113 aa5.4□□□□□ -1.54
NEDD9-208ENST00000504387 IGLV5-39A0A0G2JS06 123 aa5.4□□□□□ -1.54
NEDD9-208ENST00000504387 CRYGAP11844 174 aa5.4□□□□□ -1.54
NEDD9-208ENST00000504387 KLK9Q2XQG4 91 aa5.4□□□□□ -1.54
NEDD9-208ENST00000504387 C6orf226Q5I0X4 101 aa5.4□□□□□ -1.54
NEDD9-208ENST00000504387 SCXQ7RTU7 201 aa5.4□□□□□ -1.54
NEDD9-208ENST00000504387 COX7B2Q8TF08 81 aa5.4□□□□□ -1.54
NEDD9-208ENST00000504387 HAMPP81172 84 aa5.4□□□□□ -1.55
NEDD9-208ENST00000504387 LINC01600Q96MT4 127 aa5.4□□□□□ -1.55
NEDD9-208ENST00000504387 CDC42SE2Q9NRR3 84 aa5.4□□□□□ -1.55
NEDD9-208ENST00000504387 KMT2BQ9UMN6 2715 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 684 ms