RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 MLANAQ16655 118 aa6.99□□□□□ -1.29
PDLIM5-207ENST00000503974 SCGB3A1Q96QR1 104 aa6.99□□□□□ -1.29
PDLIM5-207ENST00000503974 TRGV3P03979 118 aa6.98□□□□□ -1.29
PDLIM5-207ENST00000503974 BEAN1Q3B7T3 259 aa6.98□□□□□ -1.29
PDLIM5-207ENST00000503974 KTN1-AS1Q86SY8 53 aa6.98□□□□□ -1.29
PDLIM5-207ENST00000503974 TOMM6Q96B49 74 aa6.98□□□□□ -1.29
PDLIM5-207ENST00000503974 USMG5Q96IX5 58 aa6.98□□□□□ -1.29
PDLIM5-207ENST00000503974 COL6A5A8TX70 2615 aa6.97□□□□□ -1.29
PDLIM5-207ENST00000503974 K7EIM0 57 aa6.97□□□□□ -1.29
PDLIM5-207ENST00000503974 BCE1O60756 84 aa6.97□□□□□ -1.29
PDLIM5-207ENST00000503974 SUB1P53999 127 aaKnown RBP eCLIP6.97□□□□□ -1.29
PDLIM5-207ENST00000503974 FAM229BQ4G0N7 80 aa6.97□□□□□ -1.29
PDLIM5-207ENST00000503974 PAPPA-AS1Q5QFB9 102 aa6.97□□□□□ -1.29
PDLIM5-207ENST00000503974 C22orf24Q9Y442 160 aa6.97□□□□□ -1.29
PDLIM5-207ENST00000503974 I3L2K1 104 aa6.97□□□□□ -1.29
PDLIM5-207ENST00000503974 ADAMTSL4-AS1Q5T5F5 129 aa6.97□□□□□ -1.29
PDLIM5-207ENST00000503974 C11orf68Q9H3H3 251 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-207ENST00000503974 TENM1Q9UKZ4 2725 aa6.96□□□□□ -1.29
PDLIM5-207ENST00000503974 C11orf86A6NJI1 115 aa6.96□□□□□ -1.29
PDLIM5-207ENST00000503974 SH2D1AO60880 128 aa6.96□□□□□ -1.29
PDLIM5-207ENST00000503974 NXPH4O95158 308 aa6.96□□□□□ -1.29
PDLIM5-207ENST00000503974 GP9P14770 177 aa6.96□□□□□ -1.29
PDLIM5-207ENST00000503974 C15orf32Q32M92 178 aa6.96□□□□□ -1.29
PDLIM5-207ENST00000503974 FAM222AQ5U5X8 452 aa6.96□□□□□ -1.29
PDLIM5-207ENST00000503974 C4orf3Q8WVX3 66 aa6.96□□□□□ -1.29
PDLIM5-207ENST00000503974 CNFNQ9BYD5 112 aa6.96□□□□□ -1.29
PDLIM5-207ENST00000503974 TRAV13-2A0A0B4J235 113 aa6.96□□□□□ -1.3
PDLIM5-207ENST00000503974 C8orf87E5RJ46 101 aa6.96□□□□□ -1.3
PDLIM5-207ENST00000503974 IGLV4-69A0A075B6H9 119 aa6.95□□□□□ -1.3
PDLIM5-207ENST00000503974 TRAV7A0A075B6U4 112 aa6.95□□□□□ -1.3
PDLIM5-207ENST00000503974 F8W735 103 aaPredicted RBP6.95□□□□□ -1.3
PDLIM5-207ENST00000503974 F8WEM9 126 aa6.95□□□□□ -1.3
PDLIM5-207ENST00000503974 M0R3E3 92 aa6.95□□□□□ -1.3
PDLIM5-207ENST00000503974 RPL28P46779 137 aaKnown RBP6.95□□□□□ -1.3
PDLIM5-207ENST00000503974 SOSTDC1Q6X4U4 206 aa6.95□□□□□ -1.3
PDLIM5-207ENST00000503974 C18orf65Q6ZTR6 163 aa6.95□□□□□ -1.3
PDLIM5-207ENST00000503974 MSRB1Q9NZV6 116 aa6.95□□□□□ -1.3
PDLIM5-207ENST00000503974 NDUFC1O43677 76 aa6.94□□□□□ -1.3
PDLIM5-207ENST00000503974 PRR26Q8N8Z3 221 aa6.94□□□□□ -1.3
PDLIM5-207ENST00000503974 SPATA3Q8NHX4 192 aa6.94□□□□□ -1.3
PDLIM5-207ENST00000503974 IGHV3-11P01762 117 aa6.94□□□□□ -1.3
PDLIM5-207ENST00000503974 S100A7L2Q5SY68 101 aa6.94□□□□□ -1.3
PDLIM5-207ENST00000503974 STAB1Q9NY15 2570 aa6.94□□□□□ -1.3
PDLIM5-207ENST00000503974 NACAE9PAV3 2078 aa6.94□□□□□ -1.3
PDLIM5-207ENST00000503974 IGKV1D-37A0A075B6S9 117 aa6.93□□□□□ -1.3
PDLIM5-207ENST00000503974 A0A0J9YX75 114 aa6.93□□□□□ -1.3
PDLIM5-207ENST00000503974 IGIPA6NJ69 53 aa6.93□□□□□ -1.3
PDLIM5-207ENST00000503974 M0R378 163 aa6.93□□□□□ -1.3
PDLIM5-207ENST00000503974 BAALC-AS2P0C853 105 aa6.93□□□□□ -1.3
PDLIM5-207ENST00000503974 THAP8Q8NA92 274 aa6.93□□□□□ -1.3
PDLIM5-207ENST00000503974 MRPL36Q9P0J6 103 aaKnown RBP6.93□□□□□ -1.3
PDLIM5-207ENST00000503974 TRBV27A0A0K0K1C4 114 aa6.92□□□□□ -1.3
PDLIM5-207ENST00000503974 IGHV3-48P01763 117 aa6.92□□□□□ -1.3
PDLIM5-207ENST00000503974 ZNF575Q86XF7 245 aa6.92□□□□□ -1.3
PDLIM5-207ENST00000503974 LINC00846Q9NV44 126 aa6.92□□□□□ -1.3
PDLIM5-207ENST00000503974 IGHV3-21A0A0B4J1V1 117 aa6.92□□□□□ -1.3
PDLIM5-207ENST00000503974 SDHAF1A6NFY7 115 aa6.92□□□□□ -1.3
PDLIM5-207ENST00000503974 TRBV12-3P01733 135 aa6.92□□□□□ -1.3
PDLIM5-207ENST00000503974 VPREB1P12018 145 aa6.92□□□□□ -1.3
PDLIM5-207ENST00000503974 RMI2Q96E14 147 aa6.92□□□□□ -1.3
PDLIM5-207ENST00000503974 C8orf49Q96NF6 230 aa6.92□□□□□ -1.3
PDLIM5-207ENST00000503974 S4R3C0 116 aa6.92□□□□□ -1.3
PDLIM5-207ENST00000503974 ANK2Q01484 3957 aa6.92□□□□□ -1.3
PDLIM5-207ENST00000503974 TRAV23DV6A0A075B6W5 121 aa6.91□□□□□ -1.3
PDLIM5-207ENST00000503974 IGHV4OR15-8A0A075B7B6 117 aa6.91□□□□□ -1.3
PDLIM5-207ENST00000503974 A0A087WW49 117 aa6.91□□□□□ -1.3
PDLIM5-207ENST00000503974 CLEC19AQ6UXS0 136 aa6.91□□□□□ -1.3
PDLIM5-207ENST00000503974 COX8CQ7Z4L0 72 aa6.91□□□□□ -1.3
PDLIM5-207ENST00000503974 LINC00588Q9Y4M8 146 aa6.91□□□□□ -1.3
PDLIM5-207ENST00000503974 LEPROTO15243 131 aa6.91□□□□□ -1.3
PDLIM5-207ENST00000503974 IGHV3-23P01764 117 aa6.91□□□□□ -1.3
PDLIM5-207ENST00000503974 CTSGP08311 255 aa6.91□□□□□ -1.3
PDLIM5-207ENST00000503974 DEFB136Q30KP8 78 aa6.91□□□□□ -1.3
PDLIM5-207ENST00000503974 CCL24O00175 119 aa6.9□□□□□ -1.3
PDLIM5-207ENST00000503974 ESRGQ1W209 222 aa6.9□□□□□ -1.3
PDLIM5-207ENST00000503974 SMIM2Q9BVW6 85 aa6.9□□□□□ -1.3
PDLIM5-207ENST00000503974 TMEM14CQ9P0S9 112 aa6.9□□□□□ -1.3
PDLIM5-207ENST00000503974 COX7A2LO14548 114 aa6.89□□□□□ -1.31
PDLIM5-207ENST00000503974 DNAL4O96015 105 aa6.89□□□□□ -1.31
PDLIM5-207ENST00000503974 IGKV1-17P01599 117 aa6.89□□□□□ -1.31
PDLIM5-207ENST00000503974 C2orf66Q6UXQ4 117 aa6.89□□□□□ -1.31
PDLIM5-207ENST00000503974 GPHB5Q86YW7 130 aa6.89□□□□□ -1.31
PDLIM5-207ENST00000503974 LITAFQ99732 161 aa6.89□□□□□ -1.31
PDLIM5-207ENST00000503974 NDUFS5O43920 106 aa6.88□□□□□ -1.31
PDLIM5-207ENST00000503974 ATP5EP2Q5VTU8 51 aa6.88□□□□□ -1.31
PDLIM5-207ENST00000503974 SNURFQ9Y675 71 aa6.88□□□□□ -1.31
PDLIM5-207ENST00000503974 TRAV12-3A0A0B4J271 114 aa6.88□□□□□ -1.31
PDLIM5-207ENST00000503974 A0A0J9YXY3 114 aa6.88□□□□□ -1.31
PDLIM5-207ENST00000503974 NDUFA4O00483 81 aa6.88□□□□□ -1.31
PDLIM5-207ENST00000503974 SLURP1P55000 103 aa6.88□□□□□ -1.31
PDLIM5-207ENST00000503974 TMEM61Q8N0U2 210 aa6.88□□□□□ -1.31
PDLIM5-207ENST00000503974 WFDC9Q8NEX5 89 aa6.88□□□□□ -1.31
PDLIM5-207ENST00000503974 ZFAND3Q9H8U3 227 aa6.88□□□□□ -1.31
PDLIM5-207ENST00000503974 A0A087WZ39 114 aa6.87□□□□□ -1.31
PDLIM5-207ENST00000503974 TRBV10-3A0A0K0K1G6 114 aa6.87□□□□□ -1.31
PDLIM5-207ENST00000503974 Q1T7F1 81 aa6.87□□□□□ -1.31
PDLIM5-207ENST00000503974 TSHBP01222 138 aa6.86□□□□□ -1.31
PDLIM5-207ENST00000503974 MIFP14174 115 aa6.86□□□□□ -1.31
PDLIM5-207ENST00000503974 RNASE4P34096 147 aaKnown RBP6.86□□□□□ -1.31
PDLIM5-207ENST00000503974 LYPD1Q8N2G4 141 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms