RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 Q56UQ5 140 aa-0.32□□□□□ -2.46
CDC42SE2-204ENST00000502639 TMEM170BQ5T4T1 132 aa-0.32□□□□□ -2.46
CDC42SE2-204ENST00000502639 Q5VSD8 79 aa-0.32□□□□□ -2.46
CDC42SE2-204ENST00000502639 C12orf73Q69YU5 71 aa-0.32□□□□□ -2.46
CDC42SE2-204ENST00000502639 SMIM4Q8WVI0 70 aa-0.32□□□□□ -2.46
CDC42SE2-204ENST00000502639 SPANXDQ9BXN6 97 aa-0.32□□□□□ -2.46
CDC42SE2-204ENST00000502639 NAA60Q9H7X0 242 aa-0.32□□□□□ -2.46
CDC42SE2-204ENST00000502639 CPSF1Q10570 1443 aaKnown RBP-0.32□□□□□ -2.46
CDC42SE2-204ENST00000502639 MXRA5Q9NR99 2828 aa-0.32□□□□□ -2.46
CDC42SE2-204ENST00000502639 ITPR1Q14643 2758 aa-0.33□□□□□ -2.46
CDC42SE2-204ENST00000502639 QRICH2Q9H0J4 1663 aa-0.33□□□□□ -2.46
CDC42SE2-204ENST00000502639 FXYD6-FXYD2A0A087WZ82 144 aa-0.33□□□□□ -2.46
CDC42SE2-204ENST00000502639 F8VRH5 84 aa-0.33□□□□□ -2.46
CDC42SE2-204ENST00000502639 HMGN4O00479 90 aa-0.33□□□□□ -2.46
CDC42SE2-204ENST00000502639 HMGN1P05114 100 aa-0.33□□□□□ -2.46
CDC42SE2-204ENST00000502639 BAGE2Q86Y30 109 aa-0.33□□□□□ -2.46
CDC42SE2-204ENST00000502639 COPS9Q8WXC6 57 aa-0.33□□□□□ -2.46
CDC42SE2-204ENST00000502639 TSC22D3Q99576 134 aa-0.33□□□□□ -2.46
CDC42SE2-204ENST00000502639 SPCS1Q9Y6A9 102 aa-0.33□□□□□ -2.46
CDC42SE2-204ENST00000502639 HTTP42858 3142 aa-0.33□□□□□ -2.46
CDC42SE2-204ENST00000502639 RIMS1Q86UR5 1692 aaKnown RBP-0.33□□□□□ -2.46
CDC42SE2-204ENST00000502639 URB1O60287 2271 aaKnown RBP-0.34□□□□□ -2.46
CDC42SE2-204ENST00000502639 AKAP13Q12802 2813 aa-0.34□□□□□ -2.46
CDC42SE2-204ENST00000502639 LRRC37A2A6NM11 1700 aa-0.34□□□□□ -2.46
CDC42SE2-204ENST00000502639 BTG2P78543 158 aa-0.34□□□□□ -2.46
CDC42SE2-204ENST00000502639 DYNLRB1Q9NP97 96 aa-0.34□□□□□ -2.46
CDC42SE2-204ENST00000502639 LINC01558Q9Y6Z2 57 aa-0.34□□□□□ -2.46
CDC42SE2-204ENST00000502639 BTAF1O14981 1849 aa-0.34□□□□□ -2.46
CDC42SE2-204ENST00000502639 SBF2Q86WG5 1849 aa-0.34□□□□□ -2.46
CDC42SE2-204ENST00000502639 ROCK2O75116 1388 aaKnown RBP-0.34□□□□□ -2.46
CDC42SE2-204ENST00000502639 HERC2O95714 4834 aa-0.34□□□□□ -2.46
CDC42SE2-204ENST00000502639 GOLGA4Q13439 2230 aaKnown RBP-0.34□□□□□ -2.46
CDC42SE2-204ENST00000502639 ZFHX3Q15911 3703 aa-0.35□□□□□ -2.47
CDC42SE2-204ENST00000502639 C5orf38Q86SI9 138 aa-0.35□□□□□ -2.47
CDC42SE2-204ENST00000502639 PPP3R2Q96LZ3 170 aa-0.35□□□□□ -2.47
CDC42SE2-204ENST00000502639 MGST2Q99735 147 aa-0.35□□□□□ -2.47
CDC42SE2-204ENST00000502639 DSPP15924 2871 aaKnown RBP-0.35□□□□□ -2.47
CDC42SE2-204ENST00000502639 PAPPAQ13219 1627 aa-0.35□□□□□ -2.47
CDC42SE2-204ENST00000502639 SHROOM2Q13796 1616 aa-0.35□□□□□ -2.47
CDC42SE2-204ENST00000502639 NSD3Q9BZ95 1437 aa-0.36□□□□□ -2.47
CDC42SE2-204ENST00000502639 TRBV6-1A0A0K0K1D8 114 aa-0.36□□□□□ -2.47
CDC42SE2-204ENST00000502639 UQCR11O14957 56 aa-0.36□□□□□ -2.47
CDC42SE2-204ENST00000502639 APOC2P02655 101 aa-0.36□□□□□ -2.47
CDC42SE2-204ENST00000502639 AKAIN1P0CW23 69 aa-0.36□□□□□ -2.47
CDC42SE2-204ENST00000502639 STARD9Q9P2P6 4700 aa-0.36□□□□□ -2.47
CDC42SE2-204ENST00000502639 DNAH3Q8TD57 4116 aa-0.36□□□□□ -2.47
CDC42SE2-204ENST00000502639 ARHGEF5Q12774 1597 aa-0.36□□□□□ -2.47
CDC42SE2-204ENST00000502639 PIGBOS1A0A0B4J2F0 54 aa-0.37□□□□□ -2.47
CDC42SE2-204ENST00000502639 A0A1B0GV90 55 aa-0.37□□□□□ -2.47
CDC42SE2-204ENST00000502639 CHKB-CPT1BH3BT56 60 aa-0.37□□□□□ -2.47
CDC42SE2-204ENST00000502639 FGF7P21781 194 aa-0.37□□□□□ -2.47
CDC42SE2-204ENST00000502639 COX17Q14061 63 aa-0.37□□□□□ -2.47
CDC42SE2-204ENST00000502639 KRTAP19-8Q3LI54 63 aa-0.37□□□□□ -2.47
CDC42SE2-204ENST00000502639 COMMD6Q7Z4G1 85 aa-0.37□□□□□ -2.47
CDC42SE2-204ENST00000502639 PP6455Q8WZ26 134 aa-0.37□□□□□ -2.47
CDC42SE2-204ENST00000502639 BCL9LQ86UU0 1499 aa-0.37□□□□□ -2.47
CDC42SE2-204ENST00000502639 DNAJC13O75165 2243 aa-0.38□□□□□ -2.47
CDC42SE2-204ENST00000502639 LAMA2P24043 3122 aaKnown RBP-0.38□□□□□ -2.47
CDC42SE2-204ENST00000502639 SFT2D2O95562 160 aa-0.38□□□□□ -2.47
CDC42SE2-204ENST00000502639 SPRR2BP35325 72 aa-0.38□□□□□ -2.47
CDC42SE2-204ENST00000502639 MRPL54Q6P161 138 aaKnown RBP-0.38□□□□□ -2.47
CDC42SE2-204ENST00000502639 KDM5AP29375 1690 aaKnown RBP-0.38□□□□□ -2.47
CDC42SE2-204ENST00000502639 VPS13DQ5THJ4 4388 aa-0.38□□□□□ -2.47
CDC42SE2-204ENST00000502639 BIRC6Q9NR09 4857 aa-0.38□□□□□ -2.47
CDC42SE2-204ENST00000502639 LRRK2Q5S007 2527 aa-0.39□□□□□ -2.47
CDC42SE2-204ENST00000502639 A2ML1A8K2U0 1454 aa-0.39□□□□□ -2.47
CDC42SE2-204ENST00000502639 SPRR1BP22528 89 aa-0.39□□□□□ -2.47
CDC42SE2-204ENST00000502639 C9orf153Q5TBE3 101 aa-0.39□□□□□ -2.47
CDC42SE2-204ENST00000502639 TSC2P49815 1807 aa-0.39□□□□□ -2.47
CDC42SE2-204ENST00000502639 TACC2O95359 2948 aa-0.39□□□□□ -2.47
CDC42SE2-204ENST00000502639 PKD1P98161 4303 aa-0.4□□□□□ -2.47
CDC42SE2-204ENST00000502639 CUL7Q14999 1698 aa-0.4□□□□□ -2.47
CDC42SE2-204ENST00000502639 LYSTQ99698 3801 aa-0.4□□□□□ -2.47
CDC42SE2-204ENST00000502639 REV3LO60673 3130 aa-0.4□□□□□ -2.47
CDC42SE2-204ENST00000502639 SSSCA1O60232 199 aa-0.4□□□□□ -2.47
CDC42SE2-204ENST00000502639 SNAPC5O75971 98 aa-0.4□□□□□ -2.47
CDC42SE2-204ENST00000502639 TNFP01375 233 aa-0.4□□□□□ -2.47
CDC42SE2-204ENST00000502639 IFNGP01579 166 aa-0.4□□□□□ -2.47
CDC42SE2-204ENST00000502639 IGLC1P0CG04 106 aa-0.4□□□□□ -2.47
CDC42SE2-204ENST00000502639 DCDP81605 110 aaKnown RBP-0.4□□□□□ -2.47
CDC42SE2-204ENST00000502639 KRTAP20-2Q3LI61 65 aa-0.4□□□□□ -2.47
CDC42SE2-204ENST00000502639 SFTA2Q6UW10 78 aa-0.4□□□□□ -2.47
CDC42SE2-204ENST00000502639 C8orf59Q8N0T1 100 aaPredicted RBP-0.4□□□□□ -2.47
CDC42SE2-204ENST00000502639 MYOZ3Q8TDC0 251 aa-0.4□□□□□ -2.47
CDC42SE2-204ENST00000502639 DPH3P1Q9H4G8 78 aa-0.4□□□□□ -2.47
CDC42SE2-204ENST00000502639 CDC42SE2Q9NRR3 84 aa-0.4□□□□□ -2.47
CDC42SE2-204ENST00000502639 ITPR3Q14573 2671 aa-0.4□□□□□ -2.47
CDC42SE2-204ENST00000502639 MYOM1P52179 1685 aa-0.4□□□□□ -2.47
CDC42SE2-204ENST00000502639 PRRC2CQ9Y520 2896 aaKnown RBP-0.4□□□□□ -2.47
CDC42SE2-204ENST00000502639 PKHD1L1Q86WI1 4243 aa-0.41□□□□□ -2.47
CDC42SE2-204ENST00000502639 LOC730098B7Z3J9 87 aa-0.41□□□□□ -2.48
CDC42SE2-204ENST00000502639 K7EQZ3 153 aa-0.41□□□□□ -2.48
CDC42SE2-204ENST00000502639 APOC3P02656 99 aa-0.41□□□□□ -2.48
CDC42SE2-204ENST00000502639 S100A3P33764 101 aa-0.41□□□□□ -2.48
CDC42SE2-204ENST00000502639 MT4P47944 62 aa-0.41□□□□□ -2.48
CDC42SE2-204ENST00000502639 TPPP2P59282 170 aa-0.41□□□□□ -2.48
CDC42SE2-204ENST00000502639 RPL13AP3Q6NVV1 102 aa-0.41□□□□□ -2.48
CDC42SE2-204ENST00000502639 FAM223AQ8IWN6 122 aa-0.41□□□□□ -2.48
CDC42SE2-204ENST00000502639 LCN9Q8WX39 176 aa-0.41□□□□□ -2.48
CDC42SE2-204ENST00000502639 SPRR4Q96PI1 79 aa-0.41□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms