RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 DEFB1P60022 68 aa3.41□□□□□ -1.86
NEDD4-203ENST00000502612 PMVKQ15126 192 aa3.41□□□□□ -1.86
NEDD4-203ENST00000502612 C6orf99Q4VX62 202 aa3.41□□□□□ -1.86
NEDD4-203ENST00000502612 BVES-AS1Q5T3Y7 98 aa3.41□□□□□ -1.86
NEDD4-203ENST00000502612 NDUFA11Q86Y39 141 aa3.41□□□□□ -1.86
NEDD4-203ENST00000502612 BAALCQ8WXS3 180 aa3.41□□□□□ -1.86
NEDD4-203ENST00000502612 RPL39LQ96EH5 51 aaKnown RBP3.41□□□□□ -1.86
NEDD4-203ENST00000502612 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
NEDD4-203ENST00000502612 MRPL35Q9NZE8 188 aaKnown RBP3.41□□□□□ -1.86
NEDD4-203ENST00000502612 CBY1Q9Y3M2 126 aa3.41□□□□□ -1.86
NEDD4-203ENST00000502612 USP24Q9UPU5 2620 aa3.41□□□□□ -1.86
NEDD4-203ENST00000502612 FAM208BQ5VWN6 2430 aa3.41□□□□□ -1.86
NEDD4-203ENST00000502612 ADGRG4Q8IZF6 3080 aa3.4□□□□□ -1.86
NEDD4-203ENST00000502612 HRNRQ86YZ3 2850 aaPredicted RBP3.4□□□□□ -1.86
NEDD4-203ENST00000502612 M0QY20 66 aa3.4□□□□□ -1.87
NEDD4-203ENST00000502612 CD28P10747 220 aa3.4□□□□□ -1.87
NEDD4-203ENST00000502612 HTN1P15515 57 aa3.4□□□□□ -1.87
NEDD4-203ENST00000502612 FXYD7P58549 80 aa3.4□□□□□ -1.87
NEDD4-203ENST00000502612 KRTAP5-4Q6L8H1 288 aa3.4□□□□□ -1.87
NEDD4-203ENST00000502612 Q6ZQT7 251 aa3.4□□□□□ -1.87
NEDD4-203ENST00000502612 HHLA3Q9XRX5 114 aa3.4□□□□□ -1.87
NEDD4-203ENST00000502612 TP53TG1Q9Y2A0 90 aa3.4□□□□□ -1.87
NEDD4-203ENST00000502612 KALRNO60229 2985 aa3.4□□□□□ -1.87
NEDD4-203ENST00000502612 TRBV10-1A0A0K0K1A3 114 aa3.39□□□□□ -1.87
NEDD4-203ENST00000502612 H3BRM9 83 aa3.39□□□□□ -1.87
NEDD4-203ENST00000502612 IGLV1-51P01701 117 aa3.39□□□□□ -1.87
NEDD4-203ENST00000502612 IGHV3-53P01767 116 aa3.39□□□□□ -1.87
NEDD4-203ENST00000502612 SMIM13P0DJ93 91 aa3.39□□□□□ -1.87
NEDD4-203ENST00000502612 COTL1Q14019 142 aa3.39□□□□□ -1.87
NEDD4-203ENST00000502612 VAMP3Q15836 100 aa3.39□□□□□ -1.87
NEDD4-203ENST00000502612 GTF2H5Q6ZYL4 71 aa3.39□□□□□ -1.87
NEDD4-203ENST00000502612 TMEM263Q8WUH6 116 aaKnown RBP3.39□□□□□ -1.87
NEDD4-203ENST00000502612 SPANXA1Q9NS26 97 aa3.39□□□□□ -1.87
NEDD4-203ENST00000502612 TRAV8-6A0A0B4J262 113 aa3.38□□□□□ -1.87
NEDD4-203ENST00000502612 MYMXA0A1B0GTQ4 84 aa3.38□□□□□ -1.87
NEDD4-203ENST00000502612 IGIPA6NJ69 53 aa3.38□□□□□ -1.87
NEDD4-203ENST00000502612 C11orf86A6NJI1 115 aa3.38□□□□□ -1.87
NEDD4-203ENST00000502612 FGF6P10767 208 aa3.38□□□□□ -1.87
NEDD4-203ENST00000502612 RRN3P1Q2M238 152 aa3.38□□□□□ -1.87
NEDD4-203ENST00000502612 CFAP126Q5VTH2 177 aa3.38□□□□□ -1.87
NEDD4-203ENST00000502612 SCGB1D4Q6XE38 83 aa3.38□□□□□ -1.87
NEDD4-203ENST00000502612 C2orf91Q6ZV80 131 aa3.38□□□□□ -1.87
NEDD4-203ENST00000502612 DAZ4Q86SG3 579 aaKnown RBP3.38□□□□□ -1.87
NEDD4-203ENST00000502612 CST9LQ9H4G1 147 aa3.38□□□□□ -1.87
NEDD4-203ENST00000502612 KMT2BQ9UMN6 2715 aaPredicted RBP3.38□□□□□ -1.87
NEDD4-203ENST00000502612 UBR5O95071 2799 aaPredicted RBP3.38□□□□□ -1.87
NEDD4-203ENST00000502612 IGSF10Q6WRI0 2623 aa3.38□□□□□ -1.87
NEDD4-203ENST00000502612 ZFYVE26Q68DK2 2539 aa3.37□□□□□ -1.87
NEDD4-203ENST00000502612 ABCA2Q9BZC7 2435 aa3.37□□□□□ -1.87
NEDD4-203ENST00000502612 TRBV25-1A0A075B6N4 114 aa3.37□□□□□ -1.87
NEDD4-203ENST00000502612 TRAV4A0A0B4J268 109 aa3.37□□□□□ -1.87
NEDD4-203ENST00000502612 SMIM9A6NGZ8 99 aa3.37□□□□□ -1.87
NEDD4-203ENST00000502612 FABP2P12104 132 aa3.37□□□□□ -1.87
NEDD4-203ENST00000502612 LGALS3P17931 250 aaKnown RBP3.37□□□□□ -1.87
NEDD4-203ENST00000502612 TMEM170BQ5T4T1 132 aa3.37□□□□□ -1.87
NEDD4-203ENST00000502612 LYRM7Q5U5X0 104 aa3.37□□□□□ -1.87
NEDD4-203ENST00000502612 SPANXA2-OT1Q8N9U9 137 aa3.37□□□□□ -1.87
NEDD4-203ENST00000502612 PLEKHB2Q96CS7 222 aa3.37□□□□□ -1.87
NEDD4-203ENST00000502612 CHCHD7Q9BUK0 85 aa3.37□□□□□ -1.87
NEDD4-203ENST00000502612 TIMM21Q9BVV7 248 aa3.37□□□□□ -1.87
NEDD4-203ENST00000502612 NBEAQ8NFP9 2946 aa3.37□□□□□ -1.87
NEDD4-203ENST00000502612 SMG1Q96Q15 3661 aaKnown RBP3.37□□□□□ -1.87
NEDD4-203ENST00000502612 SPTBN1Q01082 2364 aaKnown RBP3.37□□□□□ -1.87
NEDD4-203ENST00000502612 NBASA2RRP1 2371 aa3.36□□□□□ -1.87
NEDD4-203ENST00000502612 TRBV7-3A0A075B6L6 115 aa3.36□□□□□ -1.87
NEDD4-203ENST00000502612 TRGV1A0A0A0MS02 117 aa3.36□□□□□ -1.87
NEDD4-203ENST00000502612 TRBV6-4A0A1B0GX49 114 aa3.36□□□□□ -1.87
NEDD4-203ENST00000502612 ZNF815PA8K554 130 aa3.36□□□□□ -1.87
NEDD4-203ENST00000502612 TAX1BP3O14907 124 aa3.36□□□□□ -1.87
NEDD4-203ENST00000502612 MRPS36P82909 103 aaKnown RBP3.36□□□□□ -1.87
NEDD4-203ENST00000502612 C1orf158Q8N1D5 194 aa3.36□□□□□ -1.87
NEDD4-203ENST00000502612 OR5A1Q8NGJ0 315 aa3.36□□□□□ -1.87
NEDD4-203ENST00000502612 COPS9Q8WXC6 57 aa3.36□□□□□ -1.87
NEDD4-203ENST00000502612 PRADC1Q9BSG0 188 aa3.36□□□□□ -1.87
NEDD4-203ENST00000502612 FASNP49327 2511 aaKnown RBP3.36□□□□□ -1.87
NEDD4-203ENST00000502612 LRBAP50851 2863 aa3.35□□□□□ -1.87
NEDD4-203ENST00000502612 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.35□□□□□ -1.87
NEDD4-203ENST00000502612 CHD6Q8TD26 2715 aa3.35□□□□□ -1.87
NEDD4-203ENST00000502612 TRGV2A0A075B6R0 118 aa3.35□□□□□ -1.87
NEDD4-203ENST00000502612 IGKV2D-26A0A0A0MRZ7 120 aa3.35□□□□□ -1.87
NEDD4-203ENST00000502612 IGHV3-73A0A0B4J1V6 119 aa3.35□□□□□ -1.87
NEDD4-203ENST00000502612 TINCRA0A1B0GVN0 87 aa3.35□□□□□ -1.87
NEDD4-203ENST00000502612 TMEM238C9JI98 176 aa3.35□□□□□ -1.87
NEDD4-203ENST00000502612 UBE2L6O14933 153 aa3.35□□□□□ -1.87
NEDD4-203ENST00000502612 LEPROTO15243 131 aa3.35□□□□□ -1.87
NEDD4-203ENST00000502612 KRTAP10-10P60014 251 aa3.35□□□□□ -1.87
NEDD4-203ENST00000502612 RPL39P62891 51 aaKnown RBP3.35□□□□□ -1.87
NEDD4-203ENST00000502612 HERVK_113P63121 156 aa3.35□□□□□ -1.87
NEDD4-203ENST00000502612 MIR7-3HGQ8N6C7 128 aa3.35□□□□□ -1.87
NEDD4-203ENST00000502612 ST20-AS1Q8NBB2 130 aa3.35□□□□□ -1.87
NEDD4-203ENST00000502612 AMELXQ99217 191 aa3.35□□□□□ -1.87
NEDD4-203ENST00000502612 GTSF1LQ9H1H1 148 aa3.35□□□□□ -1.87
NEDD4-203ENST00000502612 SPANXB1Q9NS25 103 aaPredicted RBP3.35□□□□□ -1.87
NEDD4-203ENST00000502612 MRPL16Q9NX20 251 aaKnown RBP3.35□□□□□ -1.87
NEDD4-203ENST00000502612 RELNP78509 3460 aa3.35□□□□□ -1.87
NEDD4-203ENST00000502612 CR1P17927 2039 aa3.35□□□□□ -1.87
NEDD4-203ENST00000502612 ZNF462Q96JM2 2506 aa3.35□□□□□ -1.87
NEDD4-203ENST00000502612 ZZEF1O43149 2961 aa3.34□□□□□ -1.87
NEDD4-203ENST00000502612 WNK2Q9Y3S1 2297 aa3.34□□□□□ -1.87
NEDD4-203ENST00000502612 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms