RNA–Protein interactions for RNA: ENST00000502367.1

NFKB1-203, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-203ENST00000502367 CHAC1Q9BUX1 264 aa4.17□□□□□ -1.74
NFKB1-203ENST00000502367 NIPBLQ6KC79 2804 aaeCLIP4.17□□□□□ -1.74
NFKB1-203ENST00000502367 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.16□□□□□ -1.74
NFKB1-203ENST00000502367 A0A0J9YXV3 536 aa4.16□□□□□ -1.74
NFKB1-203ENST00000502367 TRBV10-1A0A0K0K1A3 114 aa4.16□□□□□ -1.74
NFKB1-203ENST00000502367 TMEM223A0PJW6 202 aa4.16□□□□□ -1.74
NFKB1-203ENST00000502367 IGKV2-29A2NJV5 120 aaPredicted RBP4.16□□□□□ -1.74
NFKB1-203ENST00000502367 K7EP13 123 aa4.16□□□□□ -1.74
NFKB1-203ENST00000502367 ZNF25P17030 456 aaPredicted RBP4.16□□□□□ -1.74
NFKB1-203ENST00000502367 FXYD2P54710 66 aa4.16□□□□□ -1.74
NFKB1-203ENST00000502367 C12orf54Q6X4T0 127 aa4.16□□□□□ -1.74
NFKB1-203ENST00000502367 SLC25A29Q8N8R3 303 aa4.16□□□□□ -1.74
NFKB1-203ENST00000502367 OR5A1Q8NGJ0 315 aa4.16□□□□□ -1.74
NFKB1-203ENST00000502367 TENM1Q9UKZ4 2725 aa4.15□□□□□ -1.75
NFKB1-203ENST00000502367 CRYBA4P53673 196 aa4.15□□□□□ -1.75
NFKB1-203ENST00000502367 MRPS36P82909 103 aaKnown RBP4.15□□□□□ -1.75
NFKB1-203ENST00000502367 RRN3P1Q2M238 152 aa4.15□□□□□ -1.75
NFKB1-203ENST00000502367 RNASE13Q5GAN3 156 aaKnown RBP4.15□□□□□ -1.75
NFKB1-203ENST00000502367 FAM19A3Q7Z5A8 133 aa4.15□□□□□ -1.75
NFKB1-203ENST00000502367 KIR2DL5BQ8NHK3 375 aa4.15□□□□□ -1.75
NFKB1-203ENST00000502367 TIMM21Q9BVV7 248 aa4.15□□□□□ -1.75
NFKB1-203ENST00000502367 SPANXA1Q9NS26 97 aa4.15□□□□□ -1.75
NFKB1-203ENST00000502367 ZMAT5Q9UDW3 170 aaKnown RBP4.15□□□□□ -1.75
NFKB1-203ENST00000502367 VWFP04275 2813 aa4.15□□□□□ -1.75
NFKB1-203ENST00000502367 TRAV8-6A0A0B4J262 113 aa4.14□□□□□ -1.75
NFKB1-203ENST00000502367 MYMXA0A1B0GTQ4 84 aa4.14□□□□□ -1.75
NFKB1-203ENST00000502367 TRBV6-4A0A1B0GX49 114 aa4.14□□□□□ -1.75
NFKB1-203ENST00000502367 UBE2D1P51668 147 aa4.14□□□□□ -1.75
NFKB1-203ENST00000502367 SEC11AP67812 179 aa4.14□□□□□ -1.75
NFKB1-203ENST00000502367 COTL1Q14019 142 aa4.14□□□□□ -1.75
NFKB1-203ENST00000502367 OR11H2Q8NH07 326 aa4.14□□□□□ -1.75
NFKB1-203ENST00000502367 A0A0J9YY99 117 aa4.13□□□□□ -1.75
NFKB1-203ENST00000502367 A0A1B0GWB2 263 aa4.13□□□□□ -1.75
NFKB1-203ENST00000502367 H3BRM9 83 aa4.13□□□□□ -1.75
NFKB1-203ENST00000502367 LEPROTO15243 131 aa4.13□□□□□ -1.75
NFKB1-203ENST00000502367 CCL25O15444 150 aa4.13□□□□□ -1.75
NFKB1-203ENST00000502367 COX6A2Q02221 97 aa4.13□□□□□ -1.75
NFKB1-203ENST00000502367 TAL2Q16559 108 aa4.13□□□□□ -1.75
NFKB1-203ENST00000502367 CEND1Q8N111 149 aa4.13□□□□□ -1.75
NFKB1-203ENST00000502367 Q8NAQ8 132 aa4.13□□□□□ -1.75
NFKB1-203ENST00000502367 TINCRA0A1B0GVN0 87 aa4.12□□□□□ -1.75
NFKB1-203ENST00000502367 SMIM9A6NGZ8 99 aa4.12□□□□□ -1.75
NFKB1-203ENST00000502367 ZNF815PA8K554 130 aa4.12□□□□□ -1.75
NFKB1-203ENST00000502367 KRTAP16-1A8MUX0 517 aa4.12□□□□□ -1.75
NFKB1-203ENST00000502367 K7ERJ3 54 aa4.12□□□□□ -1.75
NFKB1-203ENST00000502367 TMEM170BQ5T4T1 132 aa4.12□□□□□ -1.75
NFKB1-203ENST00000502367 DAZ4Q86SG3 579 aaKnown RBP4.12□□□□□ -1.75
NFKB1-203ENST00000502367 C10orf126Q8N4M7 172 aa4.12□□□□□ -1.75
NFKB1-203ENST00000502367 GTSF1LQ9H1H1 148 aa4.12□□□□□ -1.75
NFKB1-203ENST00000502367 VCX2Q9H322 139 aa4.12□□□□□ -1.75
NFKB1-203ENST00000502367 DAZ3Q9NR90 486 aaKnown RBP4.12□□□□□ -1.75
NFKB1-203ENST00000502367 SPANXB1Q9NS25 103 aaPredicted RBP4.12□□□□□ -1.75
NFKB1-203ENST00000502367 CELA1Q9UNI1 258 aa4.12□□□□□ -1.75
NFKB1-203ENST00000502367 CSDC2Q9Y534 153 aaKnown RBP4.12□□□□□ -1.75
NFKB1-203ENST00000502367 JMJD1CQ15652 2540 aa4.12□□□□□ -1.75
NFKB1-203ENST00000502367 TRGV2A0A075B6R0 118 aa4.11□□□□□ -1.75
NFKB1-203ENST00000502367 TRAV8-3A0A0A6YYJ7 113 aa4.11□□□□□ -1.75
NFKB1-203ENST00000502367 J3QQQ9 107 aa4.11□□□□□ -1.75
NFKB1-203ENST00000502367 HERVK_113P61574 105 aa4.11□□□□□ -1.75
NFKB1-203ENST00000502367 EGFEM1PQ0D2K5 195 aa4.11□□□□□ -1.75
NFKB1-203ENST00000502367 DEFB135Q30KP9 77 aa4.11□□□□□ -1.75
NFKB1-203ENST00000502367 LINC00242Q5T6M2 205 aa4.11□□□□□ -1.75
NFKB1-203ENST00000502367 NAA38Q9BRA0 125 aaKnown RBP4.11□□□□□ -1.75
NFKB1-203ENST00000502367 CDC42SE2Q9NRR3 84 aa4.11□□□□□ -1.75
NFKB1-203ENST00000502367 IGHV3-64A0A075B6Q5 118 aa4.1□□□□□ -1.75
NFKB1-203ENST00000502367 TRGV4A0A0C4DH28 118 aa4.1□□□□□ -1.75
NFKB1-203ENST00000502367 IGHV1-58A0A0C4DH39 117 aa4.1□□□□□ -1.75
NFKB1-203ENST00000502367 LYRM9A8MSI8 78 aa4.1□□□□□ -1.75
NFKB1-203ENST00000502367 KRTAP9-6A8MVA2 160 aa4.1□□□□□ -1.75
NFKB1-203ENST00000502367 A8MZ25 164 aa4.1□□□□□ -1.75
NFKB1-203ENST00000502367 F5H768 121 aa4.1□□□□□ -1.75
NFKB1-203ENST00000502367 IGHV3-30P01768 117 aa4.1□□□□□ -1.75
NFKB1-203ENST00000502367 SPINK8P0C7L1 97 aa4.1□□□□□ -1.75
NFKB1-203ENST00000502367 IGHV3-30-3P0DP02 117 aa4.1□□□□□ -1.75
NFKB1-203ENST00000502367 IGHV3-30-5P0DP03 117 aa4.1□□□□□ -1.75
NFKB1-203ENST00000502367 C12orf74Q32Q52 190 aa4.1□□□□□ -1.75
NFKB1-203ENST00000502367 FAM222AQ5U5X8 452 aa4.1□□□□□ -1.75
NFKB1-203ENST00000502367 AMMECR1LQ6DCA0 310 aa4.1□□□□□ -1.75
NFKB1-203ENST00000502367 VSIG2Q96IQ7 327 aa4.1□□□□□ -1.75
NFKB1-203ENST00000502367 CDKN2A-AS1Q9UH64 79 aa4.1□□□□□ -1.75
NFKB1-203ENST00000502367 IGLV4-60A0A075B6I1 120 aa4.09□□□□□ -1.75
NFKB1-203ENST00000502367 TRBV6-8A0A0A6YYG3 113 aa4.09□□□□□ -1.75
NFKB1-203ENST00000502367 IGLV9-49A0A0B4J1Y8 123 aa4.09□□□□□ -1.75
NFKB1-203ENST00000502367 A0A0J9YXY3 114 aa4.09□□□□□ -1.75
NFKB1-203ENST00000502367 A6NDN8 102 aa4.09□□□□□ -1.75
NFKB1-203ENST00000502367 IGLL5B9A064 214 aa4.09□□□□□ -1.75
NFKB1-203ENST00000502367 H7C423 109 aa4.09□□□□□ -1.75
NFKB1-203ENST00000502367 DEFB4AO15263 64 aa4.09□□□□□ -1.75
NFKB1-203ENST00000502367 DEFB130BP0DP73 79 aa4.09□□□□□ -1.75
NFKB1-203ENST00000502367 DEFB130AP0DP74 79 aa4.09□□□□□ -1.75
NFKB1-203ENST00000502367 APOC4P55056 127 aa4.09□□□□□ -1.75
NFKB1-203ENST00000502367 ADAMTSL4-AS1Q5T5F5 129 aa4.09□□□□□ -1.75
NFKB1-203ENST00000502367 RAB37Q96AX2 223 aa4.09□□□□□ -1.75
NFKB1-203ENST00000502367 TMEM243Q9BU79 118 aa4.09□□□□□ -1.75
NFKB1-203ENST00000502367 NHP2Q9NX24 153 aaKnown RBP4.09□□□□□ -1.75
NFKB1-203ENST00000502367 A0A1W2PPM0 123 aa4.08□□□□□ -1.76
NFKB1-203ENST00000502367 H3BUT2 72 aa4.08□□□□□ -1.76
NFKB1-203ENST00000502367 K7EP34 96 aa4.08□□□□□ -1.76
NFKB1-203ENST00000502367 SMIM13P0DJ93 91 aa4.08□□□□□ -1.76
NFKB1-203ENST00000502367 MIFP14174 115 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms