RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 IGHV3OR16-12A0A075B7B8 117 aa11.77□□□□□ -0.53
COL6A1-206ENST00000498614 ODF3L2Q3SX64 289 aa11.77□□□□□ -0.53
COL6A1-206ENST00000498614 MRPL23Q16540 153 aaKnown RBP11.76□□□□□ -0.53
COL6A1-206ENST00000498614 TMEM86BQ8N661 226 aa11.76□□□□□ -0.53
COL6A1-206ENST00000498614 IGLV5-45A0A087WSX0 123 aa11.75□□□□□ -0.53
COL6A1-206ENST00000498614 A0A0U1RRA0 63 aa11.75□□□□□ -0.53
COL6A1-206ENST00000498614 FAM240AA0A1B0GVK7 77 aa11.75□□□□□ -0.53
COL6A1-206ENST00000498614 TIRAPP58753 221 aa11.75□□□□□ -0.53
COL6A1-206ENST00000498614 ZNF625Q96I27 306 aaPredicted RBP11.75□□□□□ -0.53
COL6A1-206ENST00000498614 IGHV3-53P01767 116 aa11.75□□□□□ -0.53
COL6A1-206ENST00000498614 PIK3CD-AS1Q5SR53 167 aa11.75□□□□□ -0.53
COL6A1-206ENST00000498614 LINC00308Q8TCZ7 52 aa11.75□□□□□ -0.53
COL6A1-206ENST00000498614 STHQ8IWL8 128 aa11.74□□□□□ -0.53
COL6A1-206ENST00000498614 Q9H8V8 135 aa11.74□□□□□ -0.53
COL6A1-206ENST00000498614 DNAJC30Q96LL9 226 aa11.73□□□□□ -0.53
COL6A1-206ENST00000498614 CIRBPQ14011 172 aaKnown RBP11.72□□□□□ -0.53
COL6A1-206ENST00000498614 BEAN1Q3B7T3 259 aa11.72□□□□□ -0.53
COL6A1-206ENST00000498614 DGAT2L7PQ6IED9 249 aa11.72□□□□□ -0.53
COL6A1-206ENST00000498614 CCL24O00175 119 aa11.72□□□□□ -0.53
COL6A1-206ENST00000498614 RS1O15537 224 aa11.72□□□□□ -0.53
COL6A1-206ENST00000498614 SOSTDC1Q6X4U4 206 aa11.72□□□□□ -0.53
COL6A1-206ENST00000498614 IGLV5-39A0A0G2JS06 123 aa11.71□□□□□ -0.53
COL6A1-206ENST00000498614 LINC00242Q5T6M2 205 aa11.71□□□□□ -0.53
COL6A1-206ENST00000498614 C1orf158Q8N1D5 194 aa11.71□□□□□ -0.53
COL6A1-206ENST00000498614 NDUFA7O95182 113 aa11.71□□□□□ -0.54
COL6A1-206ENST00000498614 TRGV1A0A0A0MS02 117 aa11.7□□□□□ -0.54
COL6A1-206ENST00000498614 CHCHD5Q9BSY4 110 aa11.7□□□□□ -0.54
COL6A1-206ENST00000498614 TRBV7-7A0A0K0K1E9 115 aa11.69□□□□□ -0.54
COL6A1-206ENST00000498614 COX7A2LO14548 114 aa11.69□□□□□ -0.54
COL6A1-206ENST00000498614 LINC00694P0DN24 101 aa11.69□□□□□ -0.54
COL6A1-206ENST00000498614 C2CD3Q4AC94 2353 aa11.69□□□□□ -0.54
COL6A1-206ENST00000498614 TRAV25A0A0B4J276 109 aa11.69□□□□□ -0.54
COL6A1-206ENST00000498614 HILS1P60008 231 aa11.69□□□□□ -0.54
COL6A1-206ENST00000498614 SMIM1B2RUZ4 78 aa11.68□□□□□ -0.54
COL6A1-206ENST00000498614 HERVK_113P63121 156 aa11.68□□□□□ -0.54
COL6A1-206ENST00000498614 SHISA2Q6UWI4 295 aa11.67□□□□□ -0.54
COL6A1-206ENST00000498614 TRAV13-1A0A0B4J241 112 aa11.67□□□□□ -0.54
COL6A1-206ENST00000498614 RNASE1P07998 156 aaKnown RBP11.66□□□□□ -0.54
COL6A1-206ENST00000498614 MEIG1Q5JSS6 88 aa11.66□□□□□ -0.54
COL6A1-206ENST00000498614 CFAP161Q6P656 301 aa11.65□□□□□ -0.54
COL6A1-206ENST00000498614 Q6ZTI0 123 aa11.65□□□□□ -0.54
COL6A1-206ENST00000498614 IL17DQ8TAD2 202 aa11.65□□□□□ -0.54
COL6A1-206ENST00000498614 SMCR5Q8TEV8 140 aa11.65□□□□□ -0.54
COL6A1-206ENST00000498614 PRIMA1Q86XR5 153 aa11.65□□□□□ -0.54
COL6A1-206ENST00000498614 LINC01006Q8NI28 216 aa11.64□□□□□ -0.55
COL6A1-206ENST00000498614 WFDC10AQ9H1F0 79 aa11.64□□□□□ -0.55
COL6A1-206ENST00000498614 ACYP1P07311 99 aa11.63□□□□□ -0.55
COL6A1-206ENST00000498614 DAZ2Q13117 558 aaKnown RBP11.63□□□□□ -0.55
COL6A1-206ENST00000498614 NTM-AS1Q6ZSK4 140 aa11.63□□□□□ -0.55
COL6A1-206ENST00000498614 DAZ4Q86SG3 579 aaKnown RBP11.63□□□□□ -0.55
COL6A1-206ENST00000498614 FAM218AQ96MZ4 157 aa11.63□□□□□ -0.55
COL6A1-206ENST00000498614 DAZ3Q9NR90 486 aaKnown RBP11.63□□□□□ -0.55
COL6A1-206ENST00000498614 FAM19A3Q7Z5A8 133 aa11.63□□□□□ -0.55
COL6A1-206ENST00000498614 C22orf24Q9Y442 160 aa11.63□□□□□ -0.55
COL6A1-206ENST00000498614 F5H768 121 aa11.62□□□□□ -0.55
COL6A1-206ENST00000498614 C3orf56Q8N813 242 aa11.62□□□□□ -0.55
COL6A1-206ENST00000498614 NOTCH3Q9UM47 2321 aa11.62□□□□□ -0.55
COL6A1-206ENST00000498614 FAM236AA0A1B0GUQ0 79 aa11.62□□□□□ -0.55
COL6A1-206ENST00000498614 FAM236BA0A1B0GV22 79 aa11.62□□□□□ -0.55
COL6A1-206ENST00000498614 BAALC-AS2P0C853 105 aa11.62□□□□□ -0.55
COL6A1-206ENST00000498614 SMIM20Q8N5G0 67 aa11.62□□□□□ -0.55
COL6A1-206ENST00000498614 K7EQD1 137 aa11.61□□□□□ -0.55
COL6A1-206ENST00000498614 TRACP01848 142 aa11.61□□□□□ -0.55
COL6A1-206ENST00000498614 COPS9Q8WXC6 57 aa11.61□□□□□ -0.55
COL6A1-206ENST00000498614 NOP10Q9NPE3 64 aaKnown RBP11.61□□□□□ -0.55
COL6A1-206ENST00000498614 ATRQ13535 2644 aa11.61□□□□□ -0.55
COL6A1-206ENST00000498614 GIG44P09565 113 aaPredicted RBP11.6□□□□□ -0.55
COL6A1-206ENST00000498614 RPL35AP18077 110 aaKnown RBP11.6□□□□□ -0.55
COL6A1-206ENST00000498614 RPL36AP83881 106 aaKnown RBP11.6□□□□□ -0.55
COL6A1-206ENST00000498614 RPL36ALQ969Q0 106 aaKnown RBP11.6□□□□□ -0.55
COL6A1-206ENST00000498614 CDC42SE2Q9NRR3 84 aa11.6□□□□□ -0.55
COL6A1-206ENST00000498614 TENM1Q9UKZ4 2725 aa11.59□□□□□ -0.55
COL6A1-206ENST00000498614 CSDC2Q9Y534 153 aaKnown RBP11.59□□□□□ -0.55
COL6A1-206ENST00000498614 FBN1P35555 2871 aaKnown RBP11.59□□□□□ -0.55
COL6A1-206ENST00000498614 LINC00643Q86TS7 51 aa11.59□□□□□ -0.55
COL6A1-206ENST00000498614 IMUPQ9GZP8 106 aa11.59□□□□□ -0.55
COL6A1-206ENST00000498614 HERV-K104P63124 156 aa11.57□□□□□ -0.56
COL6A1-206ENST00000498614 FAM110AQ9BQ89 295 aa11.57□□□□□ -0.56
COL6A1-206ENST00000498614 C16orf95Q9H693 158 aa11.57□□□□□ -0.56
COL6A1-206ENST00000498614 Q9HAA7 133 aa11.57□□□□□ -0.56
COL6A1-206ENST00000498614 TRBV10-1A0A0K0K1A3 114 aa11.56□□□□□ -0.56
COL6A1-206ENST00000498614 SDIM1Q6ZPB5 146 aa11.56□□□□□ -0.56
COL6A1-206ENST00000498614 PLAC8L1A1L4L8 177 aa11.55□□□□□ -0.56
COL6A1-206ENST00000498614 IGLV1-51P01701 117 aa11.55□□□□□ -0.56
COL6A1-206ENST00000498614 C19orf73Q9NVV2 129 aa11.55□□□□□ -0.56
COL6A1-206ENST00000498614 TRGV2A0A075B6R0 118 aa11.54□□□□□ -0.56
COL6A1-206ENST00000498614 LOC100131303A0A0U1RQF7 123 aa11.54□□□□□ -0.56
COL6A1-206ENST00000498614 FAM222AQ5U5X8 452 aa11.54□□□□□ -0.56
COL6A1-206ENST00000498614 LINC00337Q8N6G1 96 aa11.54□□□□□ -0.56
COL6A1-206ENST00000498614 C16orf74Q96GX8 76 aa11.54□□□□□ -0.56
COL6A1-206ENST00000498614 CMC4P56277 68 aaPredicted RBP11.53□□□□□ -0.56
COL6A1-206ENST00000498614 TRRAPQ9Y4A5 3859 aa11.53□□□□□ -0.56
COL6A1-206ENST00000498614 IGKV2-28A0A075B6P5 120 aa11.53□□□□□ -0.56
COL6A1-206ENST00000498614 IGKV2D-28P01615 120 aa11.53□□□□□ -0.56
COL6A1-206ENST00000498614 RPL28P46779 137 aaKnown RBP11.53□□□□□ -0.56
COL6A1-206ENST00000498614 GAGE2AQ6NT46 116 aa11.53□□□□□ -0.56
COL6A1-206ENST00000498614 MIR7-3HGQ8N6C7 128 aa11.53□□□□□ -0.56
COL6A1-206ENST00000498614 TRAV13-2A0A0B4J235 113 aa11.52□□□□□ -0.57
COL6A1-206ENST00000498614 CRPP02741 224 aa11.52□□□□□ -0.57
COL6A1-206ENST00000498614 MALP21145 153 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms