RNA–Protein interactions for RNA: ENST00000498519.5

SHANK2-217, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-217ENST00000498519 SMIM7Q9BQ49 75 aa8.34□□□□□ -1.07
SHANK2-217ENST00000498519 IGLV1-50A0A075B6I6 118 aa8.33□□□□□ -1.08
SHANK2-217ENST00000498519 TRAV13-1A0A0B4J241 112 aa8.33□□□□□ -1.08
SHANK2-217ENST00000498519 A0A0U1RQV1 116 aa8.33□□□□□ -1.08
SHANK2-217ENST00000498519 PPP1R2P9O14990 202 aa8.33□□□□□ -1.08
SHANK2-217ENST00000498519 S100PP25815 95 aa8.33□□□□□ -1.08
SHANK2-217ENST00000498519 SPAG11BQ08648 103 aa8.33□□□□□ -1.08
SHANK2-217ENST00000498519 TMEM241Q24JQ0 296 aa8.33□□□□□ -1.08
SHANK2-217ENST00000498519 LPAP08519 4548 aa8.32□□□□□ -1.08
SHANK2-217ENST00000498519 MUC2Q02817 5179 aa8.32□□□□□ -1.08
SHANK2-217ENST00000498519 A0A087WZ39 114 aa8.32□□□□□ -1.08
SHANK2-217ENST00000498519 C9JQL5 133 aa8.32□□□□□ -1.08
SHANK2-217ENST00000498519 TCAPO15273 167 aa8.32□□□□□ -1.08
SHANK2-217ENST00000498519 RAB4AP20338 218 aa8.32□□□□□ -1.08
SHANK2-217ENST00000498519 RAB5BP61020 215 aa8.32□□□□□ -1.08
SHANK2-217ENST00000498519 PHF5AQ7RTV0 110 aaKnown RBP8.32□□□□□ -1.08
SHANK2-217ENST00000498519 PRR26Q8N8Z3 221 aa8.32□□□□□ -1.08
SHANK2-217ENST00000498519 TIMM21Q9BVV7 248 aa8.32□□□□□ -1.08
SHANK2-217ENST00000498519 MRPL35Q9NZE8 188 aaKnown RBP8.32□□□□□ -1.08
SHANK2-217ENST00000498519 UBE2D4Q9Y2X8 147 aa8.32□□□□□ -1.08
SHANK2-217ENST00000498519 HIGD1CA8MV81 97 aa8.31□□□□□ -1.08
SHANK2-217ENST00000498519 H0Y9J4 135 aa8.31□□□□□ -1.08
SHANK2-217ENST00000498519 RPL13AP40429 203 aaKnown RBP8.31□□□□□ -1.08
SHANK2-217ENST00000498519 SUMO2P61956 95 aaKnown RBP8.31□□□□□ -1.08
SHANK2-217ENST00000498519 C5orf38Q86SI9 138 aa8.31□□□□□ -1.08
SHANK2-217ENST00000498519 ANAPC16Q96DE5 110 aa8.31□□□□□ -1.08
SHANK2-217ENST00000498519 NDUFA1O15239 70 aa8.3□□□□□ -1.08
SHANK2-217ENST00000498519 UBE2D1P51668 147 aa8.3□□□□□ -1.08
SHANK2-217ENST00000498519 CBLN2Q8IUK8 224 aa8.3□□□□□ -1.08
SHANK2-217ENST00000498519 OPRPNQ99935 248 aaPredicted RBP8.3□□□□□ -1.08
SHANK2-217ENST00000498519 RIGQ13278 110 aa8.29□□□□□ -1.08
SHANK2-217ENST00000498519 ADIRFQ15847 76 aa8.29□□□□□ -1.08
SHANK2-217ENST00000498519 AMN1Q8IY45 258 aa8.29□□□□□ -1.08
SHANK2-217ENST00000498519 TLX1NBP0CAT3 122 aa8.28□□□□□ -1.08
SHANK2-217ENST00000498519 RNASE13Q5GAN3 156 aaKnown RBP8.27□□□□□ -1.09
SHANK2-217ENST00000498519 ORAOV1Q8WV07 137 aa8.27□□□□□ -1.09
SHANK2-217ENST00000498519 S100A6P06703 90 aa8.26□□□□□ -1.09
SHANK2-217ENST00000498519 UBE2BP63146 152 aa8.26□□□□□ -1.09
SHANK2-217ENST00000498519 PRR4Q16378 134 aa8.26□□□□□ -1.09
SHANK2-217ENST00000498519 Q6ZUT4 128 aa8.26□□□□□ -1.09
SHANK2-217ENST00000498519 C20orf78Q9BR46 151 aa8.26□□□□□ -1.09
SHANK2-217ENST00000498519 OSTCQ9NRP0 149 aa8.26□□□□□ -1.09
SHANK2-217ENST00000498519 SPANXA1Q9NS26 97 aa8.26□□□□□ -1.09
SHANK2-217ENST00000498519 RAB5AP20339 215 aa8.25□□□□□ -1.09
SHANK2-217ENST00000498519 LINC01551Q86U37 167 aa8.25□□□□□ -1.09
SHANK2-217ENST00000498519 NRACQ8N912 160 aa8.25□□□□□ -1.09
SHANK2-217ENST00000498519 TRAV9-1A0A075B6T8 112 aa8.24□□□□□ -1.09
SHANK2-217ENST00000498519 IGHV3OR16-9A0A0B4J2B5 98 aa8.24□□□□□ -1.09
SHANK2-217ENST00000498519 COLCA2A8K830 154 aa8.24□□□□□ -1.09
SHANK2-217ENST00000498519 SMKR1H3BMG3 65 aa8.24□□□□□ -1.09
SHANK2-217ENST00000498519 RPL23P62829 140 aaKnown RBP8.24□□□□□ -1.09
SHANK2-217ENST00000498519 RPL32P62910 135 aaKnown RBP8.24□□□□□ -1.09
SHANK2-217ENST00000498519 FAM19A5Q7Z5A7 132 aaPredicted RBP8.24□□□□□ -1.09
SHANK2-217ENST00000498519 NAT8BQ9UHF3 227 aa8.24□□□□□ -1.09
SHANK2-217ENST00000498519 TGIF2-C20orf24A0A0A6YYL0 155 aa8.23□□□□□ -1.09
SHANK2-217ENST00000498519 A0A1B0GW15 77 aa8.23□□□□□ -1.09
SHANK2-217ENST00000498519 M0QXV9 152 aa8.23□□□□□ -1.09
SHANK2-217ENST00000498519 HBBP68871 147 aa8.23□□□□□ -1.09
SHANK2-217ENST00000498519 MRPS36P82909 103 aaKnown RBP8.23□□□□□ -1.09
SHANK2-217ENST00000498519 GAGE2EQ4V326 116 aa8.23□□□□□ -1.09
SHANK2-217ENST00000498519 GAGE2DQ9UEU5 116 aa8.23□□□□□ -1.09
SHANK2-217ENST00000498519 TRBV24-1A0A075B6N3 115 aa8.22□□□□□ -1.09
SHANK2-217ENST00000498519 TRBV30A0A0K0K1B3 111 aa8.22□□□□□ -1.09
SHANK2-217ENST00000498519 FAM168BA1KXE4 195 aa8.22□□□□□ -1.09
SHANK2-217ENST00000498519 IFITM10A6NMD0 228 aa8.22□□□□□ -1.09
SHANK2-217ENST00000498519 CKS2P33552 79 aa8.22□□□□□ -1.09
SHANK2-217ENST00000498519 COX19Q49B96 90 aa8.22□□□□□ -1.09
SHANK2-217ENST00000498519 FAM104BQ5XKR9 115 aa8.22□□□□□ -1.09
SHANK2-217ENST00000498519 KRTAP1-4P0C5Y4 121 aa8.21□□□□□ -1.1
SHANK2-217ENST00000498519 UNQ6190/PRO20217Q6UXQ8 127 aa8.21□□□□□ -1.1
SHANK2-217ENST00000498519 PACRGQ96M98 296 aaPredicted RBP8.21□□□□□ -1.1
SHANK2-217ENST00000498519 C6orf48Q9UBA6 75 aa8.21□□□□□ -1.1
SHANK2-217ENST00000498519 NDUFC2-KCTD14E9PQ53 114 aa8.2□□□□□ -1.1
SHANK2-217ENST00000498519 S100A8P05109 93 aa8.2□□□□□ -1.1
SHANK2-217ENST00000498519 MRPL51Q4U2R6 128 aaKnown RBP8.2□□□□□ -1.1
SHANK2-217ENST00000498519 C10orf25Q5T742 122 aa8.2□□□□□ -1.1
SHANK2-217ENST00000498519 RPL39P62891 51 aaKnown RBP8.19□□□□□ -1.1
SHANK2-217ENST00000498519 V9GYV3 84 aa8.19□□□□□ -1.1
SHANK2-217ENST00000498519 LOC105371267A0A1B0GV96 52 aa8.18□□□□□ -1.1
SHANK2-217ENST00000498519 NUPR1O60356 82 aa8.18□□□□□ -1.1
SHANK2-217ENST00000498519 ZNF861PO60384 105 aa8.18□□□□□ -1.1
SHANK2-217ENST00000498519 TNFRSF6BO95407 300 aa8.18□□□□□ -1.1
SHANK2-217ENST00000498519 IFI27P40305 119 aaPredicted RBP8.18□□□□□ -1.1
SHANK2-217ENST00000498519 KRTAP11-1Q8IUC1 163 aa8.18□□□□□ -1.1
SHANK2-217ENST00000498519 SMIM2Q9BVW6 85 aa8.18□□□□□ -1.1
SHANK2-217ENST00000498519 PPBPP02775 128 aa8.17□□□□□ -1.1
SHANK2-217ENST00000498519 LBHQ53QV2 105 aaPredicted RBP8.17□□□□□ -1.1
SHANK2-217ENST00000498519 KIAA0087Q14695 138 aa8.16□□□□□ -1.1
SHANK2-217ENST00000498519 LINC01561Q8N1V8 128 aa8.16□□□□□ -1.1
SHANK2-217ENST00000498519 YPEL4Q96NS1 127 aa8.16□□□□□ -1.1
SHANK2-217ENST00000498519 PYGO1Q9Y3Y4 419 aa8.16□□□□□ -1.1
SHANK2-217ENST00000498519 PRSS2P07478 247 aa8.15□□□□□ -1.1
SHANK2-217ENST00000498519 FAM104AQ969W3 186 aa8.15□□□□□ -1.1
SHANK2-217ENST00000498519 SMIM27A0A1W2PRY6 76 aa8.14□□□□□ -1.11
SHANK2-217ENST00000498519 D6R8Y8 96 aa8.14□□□□□ -1.11
SHANK2-217ENST00000498519 CKS1BP61024 79 aa8.14□□□□□ -1.11
SHANK2-217ENST00000498519 LINC00242Q5T6M2 205 aa8.14□□□□□ -1.11
SHANK2-217ENST00000498519 KRTAP7-1Q8IUC3 87 aa8.14□□□□□ -1.11
SHANK2-217ENST00000498519 C2orf88Q9BSF0 95 aa8.14□□□□□ -1.11
SHANK2-217ENST00000498519 RPL28P46779 137 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms