RNA–Protein interactions for RNA: ENST00000498367.1

PDCD4-211, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 975 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-211ENST00000498367 IGKV1-17P01599 117 aa4.43□□□□□ -1.7
PDCD4-211ENST00000498367 CCL3L1P16619 93 aa4.43□□□□□ -1.7
PDCD4-211ENST00000498367 A0A087WVE0 104 aa4.42□□□□□ -1.7
PDCD4-211ENST00000498367 LY75O60449 1722 aa4.42□□□□□ -1.7
PDCD4-211ENST00000498367 PLNP26678 52 aa4.42□□□□□ -1.7
PDCD4-211ENST00000498367 LY6EQ16553 131 aa4.42□□□□□ -1.7
PDCD4-211ENST00000498367 PATE1Q8WXA2 126 aa4.42□□□□□ -1.7
PDCD4-211ENST00000498367 WFDC6Q9BQY6 131 aa4.42□□□□□ -1.7
PDCD4-211ENST00000498367 CACNA1IQ9P0X4 2223 aa4.42□□□□□ -1.7
PDCD4-211ENST00000498367 MYO7BQ6PIF6 2116 aa4.42□□□□□ -1.7
PDCD4-211ENST00000498367 IQGAP1P46940 1657 aa4.41□□□□□ -1.7
PDCD4-211ENST00000498367 SMIM27A0A1W2PRY6 76 aa4.41□□□□□ -1.7
PDCD4-211ENST00000498367 ZNF861PO60384 105 aa4.41□□□□□ -1.7
PDCD4-211ENST00000498367 CCL18P55774 89 aa4.41□□□□□ -1.7
PDCD4-211ENST00000498367 UBL5Q9BZL1 73 aa4.41□□□□□ -1.7
PDCD4-211ENST00000498367 PRO2289Q9P1D8 64 aa4.41□□□□□ -1.7
PDCD4-211ENST00000498367 TULP4Q9NRJ4 1543 aa4.41□□□□□ -1.7
PDCD4-211ENST00000498367 CTSGP08311 255 aa4.4□□□□□ -1.71
PDCD4-211ENST00000498367 PDE6GP18545 87 aa4.4□□□□□ -1.71
PDCD4-211ENST00000498367 NREPQ16612 68 aa4.4□□□□□ -1.71
PDCD4-211ENST00000498367 MRGPRG-AS1Q2M3A8 158 aa4.4□□□□□ -1.71
PDCD4-211ENST00000498367 SCN7AQ01118 1682 aa4.4□□□□□ -1.71
PDCD4-211ENST00000498367 GCC2Q8IWJ2 1684 aa4.4□□□□□ -1.71
PDCD4-211ENST00000498367 SPTBP11277 2137 aa4.4□□□□□ -1.71
PDCD4-211ENST00000498367 BCORQ6W2J9 1755 aa4.4□□□□□ -1.71
PDCD4-211ENST00000498367 KRTAP10-7P60409 375 aaPredicted RBP4.39□□□□□ -1.71
PDCD4-211ENST00000498367 KRTAP1-5Q9BYS1 174 aa4.39□□□□□ -1.71
PDCD4-211ENST00000498367 COL27A1Q8IZC6 1860 aaPredicted RBP4.39□□□□□ -1.71
PDCD4-211ENST00000498367 MDC1Q14676 2089 aaKnown RBP4.38□□□□□ -1.71
PDCD4-211ENST00000498367 FDCSPQ8NFU4 85 aa4.38□□□□□ -1.71
PDCD4-211ENST00000498367 KIF21BO75037 1637 aa4.37□□□□□ -1.71
PDCD4-211ENST00000498367 M0R135 149 aa4.37□□□□□ -1.71
PDCD4-211ENST00000498367 M0R3E3 92 aa4.37□□□□□ -1.71
PDCD4-211ENST00000498367 CAV3P56539 151 aa4.37□□□□□ -1.71
PDCD4-211ENST00000498367 TMEM263Q8WUH6 116 aaKnown RBP4.37□□□□□ -1.71
PDCD4-211ENST00000498367 LINC00208Q96KT6 92 aa4.37□□□□□ -1.71
PDCD4-211ENST00000498367 V9GYV3 84 aa4.37□□□□□ -1.71
PDCD4-211ENST00000498367 DDX60LQ5H9U9 1706 aaKnown RBP4.36□□□□□ -1.71
PDCD4-211ENST00000498367 CTXND1A0A1B0GTU2 59 aa4.36□□□□□ -1.71
PDCD4-211ENST00000498367 A0A1W2PNU3 283 aaPredicted RBP4.36□□□□□ -1.71
PDCD4-211ENST00000498367 JMJD7-PLA2G4BH0Y9G9 81 aa4.36□□□□□ -1.71
PDCD4-211ENST00000498367 H0Y9P7 68 aa4.36□□□□□ -1.71
PDCD4-211ENST00000498367 TTTY12Q9BZ98 90 aa4.36□□□□□ -1.71
PDCD4-211ENST00000498367 R4GN34 69 aa4.36□□□□□ -1.71
PDCD4-211ENST00000498367 COL4A1P02462 1669 aa4.35□□□□□ -1.71
PDCD4-211ENST00000498367 TNRC6BQ9UPQ9 1833 aaKnown RBP4.35□□□□□ -1.71
PDCD4-211ENST00000498367 CR1P17927 2039 aa4.35□□□□□ -1.71
PDCD4-211ENST00000498367 HCP5Q6MZN7 132 aa4.35□□□□□ -1.71
PDCD4-211ENST00000498367 PLAC8Q9NZF1 115 aa4.35□□□□□ -1.71
PDCD4-211ENST00000498367 TRBV6-4A0A1B0GX49 114 aa4.34□□□□□ -1.71
PDCD4-211ENST00000498367 COX17Q14061 63 aa4.34□□□□□ -1.71
PDCD4-211ENST00000498367 C10orf113Q5VZT2 155 aa4.34□□□□□ -1.71
PDCD4-211ENST00000498367 KRTAP5-11Q6L8G4 156 aa4.34□□□□□ -1.71
PDCD4-211ENST00000498367 KLK9Q9UKQ9 250 aa4.34□□□□□ -1.71
PDCD4-211ENST00000498367 SAMD9LQ8IVG5 1584 aa4.34□□□□□ -1.71
PDCD4-211ENST00000498367 MED12Q93074 2177 aa4.33□□□□□ -1.72
PDCD4-211ENST00000498367 TRAV40A0A0B4J280 105 aa4.33□□□□□ -1.72
PDCD4-211ENST00000498367 OBSCN-AS1Q96MR7 158 aa4.33□□□□□ -1.72
PDCD4-211ENST00000498367 CUL9Q8IWT3 2517 aa4.33□□□□□ -1.72
PDCD4-211ENST00000498367 TRAV21A0A0B4J279 112 aa4.32□□□□□ -1.72
PDCD4-211ENST00000498367 LCE6AA0A183 80 aa4.32□□□□□ -1.72
PDCD4-211ENST00000498367 IL9P15248 144 aa4.32□□□□□ -1.72
PDCD4-211ENST00000498367 PCDH15Q96QU1 1955 aa4.32□□□□□ -1.72
PDCD4-211ENST00000498367 SPAG17Q6Q759 2223 aa4.31□□□□□ -1.72
PDCD4-211ENST00000498367 IGKV2D-30A0A075B6S6 120 aa4.31□□□□□ -1.72
PDCD4-211ENST00000498367 IGKV3OR2-268A0A0C4DH90 116 aa4.31□□□□□ -1.72
PDCD4-211ENST00000498367 TRBV6-1A0A0K0K1D8 114 aa4.31□□□□□ -1.72
PDCD4-211ENST00000498367 LRCOL1A6NCL2 159 aa4.31□□□□□ -1.72
PDCD4-211ENST00000498367 ZNF137PP52743 207 aa4.31□□□□□ -1.72
PDCD4-211ENST00000498367 ENHOQ6UWT2 76 aa4.31□□□□□ -1.72
PDCD4-211ENST00000498367 DEFB132Q7Z7B7 95 aa4.31□□□□□ -1.72
PDCD4-211ENST00000498367 WFDC9Q8NEX5 89 aa4.31□□□□□ -1.72
PDCD4-211ENST00000498367 ABCA7Q8IZY2 2146 aa4.31□□□□□ -1.72
PDCD4-211ENST00000498367 DLEC1Q9Y238 1755 aa4.3□□□□□ -1.72
PDCD4-211ENST00000498367 NCOA6Q14686 2063 aaPredicted RBP4.3□□□□□ -1.72
PDCD4-211ENST00000498367 IGLV3-1P01715 115 aa4.3□□□□□ -1.72
PDCD4-211ENST00000498367 DEPDC5O75140 1603 aa4.29□□□□□ -1.72
PDCD4-211ENST00000498367 IGKV2-40A0A087WW87 121 aaPredicted RBP4.29□□□□□ -1.72
PDCD4-211ENST00000498367 IGKV2D-40P01614 121 aaPredicted RBP4.29□□□□□ -1.72
PDCD4-211ENST00000498367 IGKV3-20P01619 116 aa4.29□□□□□ -1.72
PDCD4-211ENST00000498367 ESPL1Q14674 2120 aa4.29□□□□□ -1.72
PDCD4-211ENST00000498367 SPRR4Q96PI1 79 aa4.29□□□□□ -1.72
PDCD4-211ENST00000498367 GFRA4Q9GZZ7 299 aa4.29□□□□□ -1.72
PDCD4-211ENST00000498367 TMEM14CQ9P0S9 112 aa4.29□□□□□ -1.72
PDCD4-211ENST00000498367 CCL26Q9Y258 94 aa4.29□□□□□ -1.72
PDCD4-211ENST00000498367 DDX60Q8IY21 1712 aaKnown RBP4.29□□□□□ -1.72
PDCD4-211ENST00000498367 DOT1LQ8TEK3 1739 aa4.29□□□□□ -1.72
PDCD4-211ENST00000498367 PRRC2BQ5JSZ5 2229 aaKnown RBP4.29□□□□□ -1.72
PDCD4-211ENST00000498367 SPATA8Q6RVD6 105 aa4.28□□□□□ -1.72
PDCD4-211ENST00000498367 WFDC10AQ9H1F0 79 aa4.28□□□□□ -1.72
PDCD4-211ENST00000498367 NRAPQ86VF7 1730 aa4.27□□□□□ -1.73
PDCD4-211ENST00000498367 E9PCH4 1651 aa4.27□□□□□ -1.73
PDCD4-211ENST00000498367 IGKV3D-15A0A087WSY6 115 aa4.27□□□□□ -1.73
PDCD4-211ENST00000498367 NDPQ00604 133 aa4.27□□□□□ -1.73
PDCD4-211ENST00000498367 LINC00612Q8N6U2 182 aa4.27□□□□□ -1.73
PDCD4-211ENST00000498367 KRTAP2-2Q9BYT5 123 aa4.27□□□□□ -1.73
PDCD4-211ENST00000498367 TET1Q8NFU7 2136 aa4.27□□□□□ -1.73
PDCD4-211ENST00000498367 SLIT1O75093 1534 aa4.26□□□□□ -1.73
PDCD4-211ENST00000498367 A0A1W2PNN7 141 aa4.26□□□□□ -1.73
PDCD4-211ENST00000498367 LINC01546A6NGU7 62 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms